Carassius auratus (goldfish): 113050325
Help
Entry
113050325 CDS
T07313
Name
(RefSeq) TAR DNA-binding protein 43-like
KO
K23600
TAR DNA-binding protein 43
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113050325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113050325
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
113050325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TDP-43_C
TDP-43_N
RRM_1
RRM_7
RRM_PARP14_3
RL
Motif
Other DBs
NCBI-GeneID:
113050325
NCBI-ProteinID:
XP_026068963
Ensembl:
ENSCARG00000046951
UniProt:
A0A6P6K9A5
LinkDB
All DBs
Position
31:5868266..5875668
Genome browser
AA seq
406 aa
AA seq
DB search
MAEMYIRVAEEENEEPMEIPSEDDGTVLLSTVAAQFPGACGLRYRSPVSQCMRGVRLVEG
VLHAPENGWGNLVYVVNYPKETVLPDNKRKMDEIDASSATKIKRGDQKTSDLIVLGLPWK
TTEQDLKDYFSTFGDVIMVQVKRDVKTGNSKGFGFVRFAEWETQGKVMSQRHMIDGRWCD
CKLPNSKQGPDEPMRSRKVFVGRCTEDITADELRQFFMQYGEVTDVFIPKPFRAFAFVTF
ADDQVAASLCGEDLIIKGVSVHISNAEPKHNNPRQMMERAGRFGNGFGGQGFGGNRSSMG
GSSNSMGNLSNFNLNPAMMAAAQAALQSSWGMMGMLAQQGQPATAGTSTSGASSTRDQPQ
TYSSGNSNYGSSSAALGWGSGSNSSGSGFNSSFGSSMDSKSSGWGM
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggccgagatgtacattcgtgtcgcggaggaggagaacgaggagccgatggagatccct
tcagaggacgacggcactgtgctgctgtccacggtggccgctcagtttccaggagcttgt
ggcctgcgttaccggagccctgtgtcccagtgcatgagaggagttcgactggtggaagga
gtcctgcacgcccccgagaatggctggggaaacctggtctatgtggtcaattatcctaaa
gaaacggttctgccggataataagaggaagatggatgagattgatgcttcatctgcaaca
aagatcaagagaggagatcagaagacttcagatctgattgtgctgggtctgccatggaaa
actacagaacaagacttaaaagactatttcagtacatttggggatgtcatcatggtgcag
gtcaagcgggatgtgaagacgggaaattcgaaaggatttgggttcgtgaggtttgcagag
tgggagactcagggtaaggtgatgtcacagcggcacatgattgacggcaggtggtgtgac
tgcaaacttcccaactcgaagcaaggtccagatgagccaatgaggagcaggaaagtgttc
gtgggccgttgcacagaggacataaccgctgatgagctccgtcagttcttcatgcagtat
ggggaggtcacagatgttttcattcctaaacccttcagagcattcgctttcgtcaccttt
gcagatgaccaggttgccgcctctctttgcggagaagatctgatcatcaagggcgtcagc
gtgcatatctccaatgctgagccaaaacacaacaaccctaggcagatgatggagcgggct
gggcgctttgggaatgggtttggaggtcagggtttcggaggcaaccgaagcagcatgggg
ggtagctccaacagcatgggaaatttaagcaatttcaacctcaatccagccatgatggct
gccgcccaggctgctctgcagagcagctggggtatgatgggaatgttagcacagcagggt
cagccagcaacagctggcacaagcacaagcggcgcaagttccactcgggaccagccccaa
acatacagctcgggcaacagcaactacggcagcagctcggccgctctcggctggggctcc
ggctctaactctagtggtagtgggtttaactccagctttggctctagtatggattcaaag
tcgtcagggtggggtatgtaa
DBGET
integrated database retrieval system