Carassius auratus (goldfish): 113051336
Help
Entry
113051336 CDS
T07313
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04010
MAPK signaling pathway
caua04120
Ubiquitin mediated proteolysis
caua04140
Autophagy - animal
caua04144
Endocytosis
caua04620
Toll-like receptor signaling pathway
caua04621
NOD-like receptor signaling pathway
caua04622
RIG-I-like receptor signaling pathway
caua05132
Salmonella infection
caua05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113051336
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113051336
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113051336
04140 Autophagy - animal
113051336
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
113051336
04621 NOD-like receptor signaling pathway
113051336
04622 RIG-I-like receptor signaling pathway
113051336
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113051336
09171 Infectious disease: bacterial
05132 Salmonella infection
113051336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113051336
04121 Ubiquitin system [BR:
caua04121
]
113051336
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113051336
Membrane trafficking [BR:
caua04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
113051336
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
113051336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
TRAF3_RING
TRAF6_Z2
RING_XB3-XBAT31
zf-TRAF_2
DUF4472
U-box
DM
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
113051336
NCBI-ProteinID:
XP_026070766
Ensembl:
ENSCARG00000013932
UniProt:
A0A6P6KGJ4
LinkDB
All DBs
Position
32:complement(2598053..2609540)
Genome browser
AA seq
546 aa
AA seq
DB search
MNTSMACNDSEKSSLDDVCCNDQYSSCAAAMEKDSYSYLSPTENPSTISVSASIPPDQQG
YDVEFDPPLESKYECPICLMGLRSAVQTPCGHRFCNSCIRKSIRDTGQKCPVDNEVLLEE
QLFPDNFAKREILSLTVRCPNVGCCDKMELRQLEKHLSHCEFATVPCPQCLESVRKSHLD
EHKSQQCLQRLMTCPDCAGSFMYADKQIHEKICPFANTVCKYCGMELIRDQLALHCDTDC
LKAPVACTFSTFGCREKMPRNELAQHMQEFTQMHMRYMAEFLRSQTHSSCPVPSNAAHSL
SDERGATARAPESCQCKPELMNLRETVLELEGRLVRQDQQIRELCIHNETQKNQVTELRR
KLSTLEDATRELEAQQYQGVYVWRLENFSLHLRNQEAGQSIVLHSPPFYTGRPGYKLCLR
LHLQTPNAPRCSNYISLFVHTMQGEFDSQLSWPLQGKIQLAVLDQVEGQHHVEVMETKPD
LQAFQRPTVQRNPKGFGYVTFLHLQVLQQRGFVKDDVLLVRCEVTPRFDASLRREGVQPR
GSEPSL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaatacttcgatggcttgcaatgactctgagaaatccagcctcgatgatgtctgctgt
aatgaccaatactccagctgtgcagcagccatggagaaagacagttattcgtatctgagc
ccgacagagaacccctccaccatcagtgtctctgcgagtatccccccggaccagcaaggc
tatgacgtggagtttgaccctccgctagagagcaagtatgagtgccctatctgtctgatg
ggccttcgctccgcagtacagacaccatgtggacatcgattctgcaactcgtgcatcagg
aagtccatcagggacacagggcaaaaatgtccagttgacaatgaggtgctgcttgaggaa
cagctcttccctgataactttgccaaacgagagatcctctcacttactgtccgatgtcct
aatgtaggatgctgtgataaaatggagttgcgccagctggagaaacacttgtctcattgt
gagtttgccacagtgccatgccctcagtgtctggagtctgttcgtaagagccatctggat
gaacacaagagccagcagtgtttacagcggcttatgacctgccctgattgtgcagggagc
tttatgtatgctgacaaacagattcatgaaaagatttgtcctttcgccaatacagtgtgt
aaatattgcggaatggagctcattcgggatcagttggcattgcactgtgacacagactgt
cttaaagctcctgtagcctgtactttcagcacgtttggttgtcgtgaaaagatgccaaga
aatgaactggcccagcacatgcaggaatttacacaaatgcacatgcgttacatggctgag
ttcctgcgcagccagacacacagtagctgcccggtgccgtcaaatgccgcccactctttg
tcagacgaacgaggagcaactgcccgagcaccagagtcgtgccagtgtaaaccagagctg
atgaacctgcgggagacagttttggagctggagggtcggctggttcgtcaagatcaacag
atccgggagctgtgcatccacaatgagacacagaaaaaccaggtcacagagctacgccga
aagctgagcaccctggaggatgccacccgagagctggaagcccagcagtatcaaggcgtc
tacgtatggcgcttggagaacttctcccttcacctgcgcaaccaagaggctggtcaatcc
atagtcctccacagcccacctttctacacgggccggccggggtacaaactctgcctacga
ctgcatctgcaaactcccaacgcccctcgctgttccaactacatctcacttttcgtgcac
actatgcagggtgagtttgacagccagctctcctggcccttgcagggcaagatccagctg
gcggtgttggaccaggtcgaggggcagcatcatgtggaagtgatggagaccaagccggac
ctgcaggccttccagaggcccactgtgcaacgcaaccccaagggtttcgggtacgtcact
ttcctgcacctacaggtgttgcagcagcgtgggtttgtgaaagacgacgtgctgttggtg
cgctgcgaggtgacaccacgatttgatgctagcctcaggagggaaggagttcaacctcgg
gggtcagaaccttcactttga
DBGET
integrated database retrieval system
