Carassius auratus (goldfish): 113051415
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Entry
113051415 CDS
T07313
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2-like
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
113051415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
caua04054
]
113051415
Pattern recognition receptors [BR:
caua04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
113051415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_6
WHD_NOD2
LRR_4
nSTAND_NTPase5
AAA_16
AAA_29
AAA_22
AAA_30
Viral_helicase1
T2SSE
Motif
Other DBs
NCBI-GeneID:
113051415
NCBI-ProteinID:
XP_026070941
Ensembl:
ENSCARG00000014533
UniProt:
A0A6P6KH28
LinkDB
All DBs
Position
32:complement(5693453..5700158)
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AA seq
982 aa
AA seq
DB search
MSTPQLILKQRAELLAVLCGGGSAEPLDCVLDLLLAWEVLVWEDYLSIQVAEKALSYKVR
QLLDVVYDKGEDACSLLLAALNQVLPEEQKTGLCFGEQCAVVGKNRPDTATLTLLADRPV
LVRKLRDNIDGALDVLLTTGCFTIKDCDVVQLPVYTPSQQVRRLLDQVRFTGETAAKTLL
QYLEQTETSRPNPEDKENHLSANCMLYQKKLRSSVAAQSHSLNTYGGTGHFSLDDIYTDG
LLEVMDGSGETTTLGLEDVVGPLGTLNDDADTFLVSGEAGSGKSTLLQRLHLLWAREALL
QNIFLLFPFSCRKLNAEHRELSLKELLFLHCCWPDRGQDEVFQFILDHPNLVLFTFDGLD
EFKQGFTDEERHCCPTKQVPVPVLLFNLLQGTLMKGVVKVVTSRPQAVGPSLKRYLHKEV
LLKGFSPGGIDCFVKKHHSDPAMARRVLESLHANSVLLSLCHIPVFCWIVTKCHQELLGS
QDGIPQTITDVYLLVLQHFFQRKSYQHQGVLGKAWLEEHLNTVLKLGQLALEGLEASCYV
FSGYELQRIGLTDQDVSMGFLTYCSDLSVTDCKRYEFLHITLQCFFAALYVVLNRNRYRS
AIYRLFQPKYKQLAGLSQRCLEPCFDSSVEGMESRVTETPNLQITAQFVSGLLSQRHHNL
LLECCPTAMRERKAKQVVKSLSKCMQRHFKSIPRPLEGEKKSMHAMPSFVWLIKCIYEMQ
DSSIAQDTMAKLDVEHLKLTYCNIGPVECTALAYVLKYLRNPVGLQLDNNSVGDVGAEQL
LPCLHICHSLYLRNNNISDEGIRKLLEKGMKCERFQKIALFNNNLTDACTQHFAWLLKSK
QNFLSLRLGNNNITSQGAEQLAEGLSYNQSLQFLGLWGNKIGDRGAEALADALKNSTTLI
WLSLVDNGVGSAGACALAKIISQSKSLEELWLNKNCISREGVECLIEALKVNTSVKEIWL
RGNNLSPGEEEELSKQESRLTF
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgagtactccccagttgatcctaaaacagcgagcagagcttctggcggtcctgtgtggt
ggaggcagtgccgaacctctggattgtgttctggaccttctcctggcctgggaggttctt
gtctgggaagattacctaagcatacaagtggcagagaaagctctaagttacaaagtcagg
caacttttagatgtggtatatgataaaggagaagatgcatgcagccttctcttggctgca
ctgaaccaggtcttacctgaggagcagaagactgggctgtgttttggggaacaatgtgct
gtggtgggcaagaacagaccagacactgcaactttaacgttacttgctgacaggccagtg
ttagtgagaaagctcagagataatattgacggagcattggatgttttactaacgactggc
tgcttcaccattaaagattgtgatgtggtgcaactacctgtatacacaccctcacagcag
gttcggaggctgttagaccaagtcaggtttacaggggaaactgctgcaaagacgttactt
cagtatctagagcaaacagagacaagcagaccaaaccctgaagataaagaaaatcatctt
tctgccaattgtatgctttaccagaagaagctgcgaagctctgttgctgcccagtcccat
tcccttaacacctatggcgggacaggacatttctccttggatgacatttacaccgatgga
cttcttgaagtaatggatggctctggtgaaactacgacgctagggttagaggatgtggtg
ggtccattggggactctaaatgacgatgctgacacctttcttgtctctggggaggcagga
agtggcaaaagcacactgcttcagcgactgcacttgctctgggcaagagaagccttgctc
caaaacatttttctgctgttccccttcagttgccgcaagctgaacgcagagcacagagag
ctgtctctgaaagagctcctcttcttgcactgctgctggcctgaccgaggtcaggatgag
gttttccagttcatcctagaccatcctaatttggtcctctttacctttgatggcctcgat
gagtttaaacagggtttcactgatgaagaacgccactgctgccccacaaagcaagtgcct
gtacctgttttgcttttcaatctgttgcagggtacgttaatgaagggtgttgtgaaggta
gtcaccagcaggccacaggctgtgggcccatcactgaagcgctatctccacaaagaagtg
ctcctgaagggtttttctcctggaggtattgattgctttgttaagaaacatcacagtgac
cctgctatggctagacgtgtcctagagtccctccatgctaactcggttttgctaagtctt
tgccacatcccagtcttctgctggattgtgaccaagtgccaccaggagcttctgggtagc
caagatggtattccccagaccatcaccgatgtctacctcctggtcttacagcatttcttc
cagcgaaagtcatatcagcaccaaggagtcctgggaaaggcctggttggaggaacatttg
aacacagtgttaaaacttggccagctggcattggaaggtctggaagcctcttgttatgtg
ttctcaggatatgagctgcaaagaattgggctcacagaccaggatgttagcatgggcttc
ctcacttactgcagcgacctatctgttacagactgtaaacgctatgaatttctgcacatc
accttacagtgcttcttcgctgctctctacgtcgttctgaatcgtaacagatatcgctct
gctatctacagactctttcagcccaagtacaagcaattggcgggcctgtctcaaagatgt
ctggaaccctgttttgacagttctgtagaggggatggagtcccgtgtgacagagacaccg
aacctccagattacagctcagtttgtgtcaggacttttatcccagcggcatcataatctc
ttgctggaatgctgtcctactgctatgcgggaacgcaaggccaagcaggtagttaagtct
ttgtctaaatgtatgcagagacatttcaagtccattcctcgtcctttagagggtgaaaag
aagagcatgcatgccatgccaagtttcgtttggctaattaagtgtatctatgaaatgcaa
gacagcagtattgctcaagataccatggctaagttggacgttgagcacctgaagctcacc
tactgtaacattggaccagtggaatgtactgcgctggcgtatgtgctaaagtacctgagg
aatcctgttgggctccagttggacaacaattcagtgggagatgtgggcgcggagcagctt
ctaccatgtctacatatttgtcactccctttatttaaggaacaataacatatcagatgaa
ggaatacggaaacttctggaaaagggaatgaagtgtgaaagattccaaaaaatagcgctt
ttcaataacaaccttacagatgcttgcacccaacactttgcttggctgttaaaatcaaag
cagaacttcctgtctttgagacttggaaataataacatcacatcgcaaggagcagagcag
ctggcagaaggcctaagctacaaccagtctttgcagtttctaggattatggggtaataaa
attggggacaggggagctgaggcattggcagatgcactcaaaaatagcacaacgctaata
tggctaagtctggtggataatggtgtgggcagtgcaggggcatgtgccctggcaaaaatt
atcagtcagagcaaatctctggaggaattgtggctaaataaaaactgtatcagcagagag
ggggttgagtgtctaatagaggcactgaaagtgaacactagtgttaaggaaatctggcta
agaggaaataatctgagcccaggggaagaggaggagctgagcaagcaagaaagcagattg
accttctga
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