Carassius auratus (goldfish): 113051942
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Entry
113051942 CDS
T07313
Name
(RefSeq) low-density lipoprotein receptor-like
KO
K12473
low-density lipoprotein receptor
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03272
Virion - Hepatitis viruses
caua04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
113051942
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113051942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113051942
Membrane trafficking [BR:
caua04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
113051942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
TMEM252
Vgb_lyase
Motif
Other DBs
NCBI-GeneID:
113051942
NCBI-ProteinID:
XP_026071924
Ensembl:
ENSCARG00000007959
UniProt:
A0A6P6KHY3
LinkDB
All DBs
Position
3:complement(24396979..24405703)
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AA seq
869 aa
AA seq
DB search
MESSLTFLLAVTFFCSVQTGVFTCEPRQYQCGNGKCIPPRWVCDETDDCGDGTDELPAAC
LAKTCRPSEFSCGGRLNQCVPKSWKCDGKADCENGADEEGCAPRRCRDGEFSCTNSQCVS
AAFVCDDERDCDDGSDEVSCPPITCGSRFFKCNNTQCVPRLWVCDGDADCADGSDESPQE
CGARTTTPTKNPCSPMEFHCGNGECIHSSWKCDGGEDCLDHSDEKNCSLPTCRPDEFQCG
DGSCIHGSRQCNHVYDCRDLSDELGCVNATHCEPPHRFKCRSGECISVEKVCNKQRDCRD
WSDEPLRECDSNECVYNNGGCSHICNDLKIGYECLCPTGFRLVDKRRCEDIDECANPDTC
SQICVNQLGSYKCECEDGYQMDPASKACKAIGTIAYLFFTNHNEVRKMTLDRSEYTRVIP
NLKNAVALDIDVASREIYWSDLSLKKIYRAPMDTADNASQHSVVIGSDLHAPEGIAVDWI
HGNIYWTDSIKKTISVATADGSRRKTLFKENLAKPRAIVVDPIKNFMFWTDWGTPAKIEK
GGLNGGDRHALVTDNIIWPNGITLDLLNGRLYWVDSKLHTLSSIGVQGDGRRTLIIDQGK
LAHPVGLTVFEETVFWTDVSNSAILSANRMTGKDITKVAEHLSSPEDIVLYHNLKQPSGI
NWCRVNNGGCDFLCLAAPQINRFSPKYTCACPDNMMLARDMRKCVKAVVTPAPPASPEIV
TTGRPQVPSKTTPKPAGPSTTNAQPSSTPSPVIPNRPTQAAPIKPSQTTIKLPLSNQTDD
HYRIVKAVSESSSSTLLALYILLPLAILCLAVGAVLFWRKWRQKNTNSIHFENPVYQKTT
EDQVHLCRNGSSDGFFYPPRQIVSVNDEI
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggagagctcattaacatttttactggctgttactttcttctgttctgttcaaacaggt
gttttcacttgtgaaccacggcaatatcagtgtggcaatggaaagtgtatcccaccaaga
tgggtatgtgatgaaactgatgactgtggtgacggcactgacgaacttcctgcggcctgc
ttggccaagacctgcagacccagtgaattcagctgtggggggcgactcaaccagtgtgtg
ccgaagagctggaagtgtgatggcaaagcagactgtgagaacggagcagatgaggaaggc
tgtgctcctcggcgctgtcgggacggcgagttcagctgcaccaacagccagtgtgtgagc
gctgcgtttgtgtgtgatgatgagagagactgtgatgacggcagtgatgaagtctcctgt
ccaccaatcacgtgtggctccaggttcttcaagtgcaataacacacagtgtgttcctcga
ctgtgggtctgtgatggtgatgccgactgtgccgatggctcagacgaatcgcctcaggaa
tgtggtgcaaggacgactacacctaccaaaaacccatgctcccctatggaattccactgc
ggcaatggggaatgcatacacagtagctggaaatgtgacgggggagaagattgcttggat
cactcggatgagaaaaactgctccttgcccacatgccgaccggatgagttccaatgtggt
gacggatcttgcatccacggcagccggcagtgcaaccacgtatatgactgcagagatttg
agtgatgagctgggttgtgttaatgcaacccattgtgagccaccacacaggtttaagtgc
cgcagtggtgaatgcatcagcgtggaaaaagtttgcaacaagcaacgggactgtagggat
tggtccgatgagccattacgagaatgtgattctaacgagtgtgtttacaacaacgggggt
tgctctcatatctgtaatgacctgaagattggttacgagtgcctgtgtcctactggcttc
cgattggtggataaaagacgatgtgaagacattgatgagtgcgccaacccagacacctgc
agccaaatatgtgtcaaccagttgggaagttacaagtgtgagtgtgaagatggctaccag
atggacccagccagcaaggcttgcaaagctattggaaccatcgcctacctgtttttcacc
aatcacaatgaggtaaggaagatgaccctggatcgtagcgagtatacacgtgtcattccc
aacctgaagaacgctgtggcactggatatagatgttgcttccagggagatctactggtca
gatttatccctcaaaaagatatacagagcaccaatggatacagcagataacgcctcccaa
cacagtgttgtgattggcagtgatttacatgcacctgagggcatcgctgtcgactggatc
cacggaaacatctactggacggacagtatcaaaaagaccatctctgtagcaacagcggac
ggaagcagacgcaagactctcttcaaagaaaacctagccaagccgcgtgctattgtggtc
gatccaattaagaacttcatgttctggactgattggggcacaccagctaagatcgagaaa
ggtggtcttaatggaggggaccgtcatgccctagttacagataacattatctggcccaac
ggaataacccttgaccttttgaacgggcgtctgtactgggttgactccaaactacacact
ctctccagcatcggcgtgcagggagacggtcggcgtactctgatcattgaccagggcaag
cttgcccaccctgtgggtctcactgtttttgaggagaccgtgttttggacagatgtgagc
aatagtgcaattctaagtgcaaatcgtatgactggaaaagacatcacgaaagttgccgaa
cacctctcatccccagaggacatagtcttgtatcacaacctcaagcaaccgagtggaatc
aactggtgccgggtcaacaacggtggctgtgatttcctgtgcctggctgcccctcaaatc
aatagattctcacccaagtacacttgtgcctgtccagacaacatgatgttggccagagac
atgcgaaagtgtgttaaagctgtagtcacaccagcacctcctgccagtcctgaaatagtt
acaactggtcgtcctcaagtaccttcaaagacaacaccaaaacctgctggcccttccaca
accaatgcacaaccttcatctactccttctccggtgatccctaaccgacccactcaagct
gctccaatcaagccttcccaaaccacaattaaactccctttatccaaccagacagatgac
cactacagaatcgttaaagccgtgtctgaatcatcatcttccacactgttggccttgtac
attttgcttcctctcgcaatcctatgtttggctgtgggtgctgtgctgttctggagaaaa
tggcgtcagaaaaatactaacagcatccactttgaaaacccagtttatcaaaagactaca
gaggaccaggtgcatctatgcagaaacggcagttctgatggctttttttacccaccgaga
cagattgtgagtgtaaatgatgaaatatga
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