Carassius auratus (goldfish): 113053712
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Entry
113053712 CDS
T07313
Name
(RefSeq) transient receptor potential cation channel subfamily M member 2-like
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
113053712
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113053712
Enzymes [BR:
caua01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
113053712
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113053712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
PKD_channel
Csx1_HEPN
Motif
Other DBs
NCBI-GeneID:
113053712
NCBI-ProteinID:
XP_026074779
Ensembl:
ENSCARG00000026665
UniProt:
A0A6P6KR74
LinkDB
All DBs
Position
34:1487632..1522616
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AA seq
1272 aa
AA seq
DB search
MDVAAIELNMSQAFSSIKDQKLPLSLPLPLSQSPFFQHSLLNKWIKENIKKKECFFYVEK
DREGICMCGYIKDEHSDEAKKLENYMGEQWNGQRHIREVPTDAFGDISFEGHGQKTAKYV
RVSSDTPCERLYQLMTKHWKLRSPNLLISVTGGAKNLNIKTHLKDKFRRGLIKVAQTSGA
WILTGGTHSGVMKHVGMAVRDYTLSSGLTEGQIVVIGVAPWGIIHNQKDLINSELMRGYL
PVEYSLDEQGQGRFSCLDINHTHFLLVDDGTRNHGVEIELRAGLEKYISQQPLGNRENSG
LTIPVVCVVLGGGKGTLNTVHNAILKHTPCVVLEGSGRVADVIAQAAALPGSEVTPDHIQ
QLIKRFFTNAEYERFDWSLVIEWTYKIQDIIRMSHLLTVFHFDEERNCDVDVAILQALLK
ASRSDGLTARQSWERQLQLAVAWNRVDIAESQIFTEDRQWTSSDLHHAMFSALVGDKPEF
VRLLLENGVCVKKFMECEDMLCELYTHLPACFFLRKLAKRVQGGKIGRGQEPQPGSTKIS
LSHVAEEVRHLLGSFTQPLYDPSCYKMTKDDVHLVGPSKGLMNPSCSDEERTANKVWESI
RDLFLWAIVQNNPEMAEISWEQCRDCIAAALAASKILRKLAQESGEDDSEEAKDMTELAS
HYEKQAIGVFSECHSWDAERAQKLLTRVSPMWGRSTCLWLALKADAKSFIAHSGVQALLT
QVWCGELSVENATWKVLLCMIFFPLIYTSFLTFRRDEDIQRQAERTEQQKLADDSVFSGS
SETKLKRHYRDSSQKPELKPELKPLNCASCLMSLFTSPQVKFYWNIASYFGFLWLFAVVL
MIDFQTYPSWRELLLYVWLTSLVFEELRQFYNDFDGPGLGRKAKMYICDVWNILDVLSII
LFIAGLVCRLLASGTVFYVGKVILCIDFIIFCLRLMAIFTISRTLGPKIIILRRMMMDLF
FFMFLLSIWVVAYGVAKQGILIHNEDRLNWIMRGAVYEPYLIIFGSVPTNIDNTQFDLDS
CSMNGSEPLKPKCPVLNDDNMPAFPEWLTIIMLCVYLLFANILLLNLLIAIFNYTFEEVQ
DNTDTIWKFQRYELIKEYHSRPALPPPFILLSHLILFIRAVLQRHSPQKHKTFRQELEQN
EEYELLAWEAYMKDNYLSSMRQDKSQSEEHRIQDIAEKVGVMSELMESEQERVSPSITKR
LATLEEQVSDSSKVLQWIVDALKSQGFESKRQLPLSRELAVVSSAAPVERSEQHRVCVSV
PTRSSVSDSKLT
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggcagcgattgagttgaacatgtcgcaagctttcagcagcattaaagaccaa
aagctgcctctgtctctgcctctgcctctgtctcagtctcccttctttcagcacagcttg
ctcaacaaatggattaaagaaaacatcaagaagaaagagtgcttcttctatgtggaaaag
gacagggaggggatttgtatgtgtggttacataaaagatgagcacagcgatgaagccaaa
aaactggagaactatatgggagagcagtggaacggacaaagacacatcagagaggtgccc
accgacgcttttggagatatcagctttgaggggcatggacagaaaaccgcaaagtatgtc
cgggtgtcctcggacacaccctgtgagcgtctctaccagctgatgaccaaacactggaaa
ctgcgttcgcccaatctgctgatatcagtgaccggtggagccaaaaacttaaacataaag
actcacctgaaggacaagtttcgtcggggtctcatcaaagtggcccagacctcaggtgca
tggatcctgacaggagggacacactctggtgtgatgaagcacgtgggcatggctgtgcga
gattacacactcagtagtggtttgacggagggacagattgtcgtcatcggtgttgcaccc
tggggaatcattcacaatcaaaaagacctcatcaattctgagctcatgcgaggttatctc
cctgtggaatactctctggacgagcaaggtcagggtcgtttctcctgtctcgatatcaac
cacactcacttcctgctggtggatgatggcactcgtaatcatggagttgagatagagctg
agggctggtctggagaaatacatctctcaacagccgctgggaaatagagagaatagtgga
ttgacgataccggtggtctgtgtggtcttgggtggcggtaaaggaacgctaaacaccgtg
cacaatgcgatactgaagcacacgccgtgtgtggtgctggagggctctggacgcgtggcg
gacgtcatcgctcaggcggcagctctgcccgggtcagaggtcactccggaccatatccag
cagctcatcaagaggttttttacaaacgctgagtacgaaagatttgattggtcgctggtc
attgagtggacctacaagattcaggacatcatccgaatgtctcatttgctcactgtgttt
cacttcgacgaggaaagaaactgtgatgttgacgtagccattctccaggctctactgaaa
gcctccagaagcgatggattaacggctcgtcagtcgtgggagagacagctgcagctcgct
gtggcctggaaccgggtcgacatcgcagagagccagatcttcaccgaggacagacagtgg
acgtccagtgatctgcatcatgccatgttttctgcgctggtgggtgacaaacctgaattt
gtgcgtctcctgctggagaatggagtgtgtgtgaagaagtttatggagtgtgaagacatg
ctctgtgagctttacacccacctgcccgcctgcttcttcctgcgcaaactcgctaaaaga
gtccagggtggaaaaatcggcaggggtcaagagccacagcctggaagcacaaagatctcc
ttgagtcacgtggctgaagaagtgcgccacctgctgggaagtttcactcaaccgttatac
gacccatcgtgctacaagatgaccaaagatgatgtccatttagtggggccgtccaaaggc
ctgatgaatccgtcatgttcggatgaagagaggaccgcaaacaaggtttgggaatcgatt
cgagatctcttcctctgggccattgtgcagaataacccagaaatggcagagatcagctgg
gagcagtgcagagactgtatcgcagccgctctggcagccagtaagatcttgaggaagctg
gcgcaggagagcggagaggacgatagtgaagaggcaaaggacatgacagaactagccagc
cactacgagaaacaagccattggtgtgttcagcgagtgtcacagctgggacgcagagagg
gcacagaagctgctgacgcgcgtctcgccgatgtggggcagaagcacctgtctgtggctc
gcgctcaaagccgacgcgaagagcttcatcgctcactctggagtccaggctctgctgact
caggtttggtgtggagagctgtctgtggagaatgcaacctggaaagtgctgctctgcatg
atcttctttcctctcatctacaccagcttcctaaccttcagacgtgatgaagacatccag
agacaggccgagaggacggagcagcagaaactggccgatgattcagtgttttctggaagc
tcagaaaccaaactcaaacggcattatcgcgactcctcacagaagcctgagctgaagcct
gagctgaagcctctaaactgtgcgtcttgtctgatgagtctgttcacgtcgcctcaagtc
aagttttactggaacatcgcctcttattttggcttcctgtggctgtttgccgtggtgctc
atgatcgatttccagacctatccgtcgtggagggaacttctgctgtatgtgtggctcaca
tcgctggtgtttgaggagcttagacagttctataatgactttgacgggcctggtttaggg
aggaaagcaaagatgtacatctgtgatgtgtggaacatactggatgtgctgtcaatcata
ctgttcattgctggtctggtctgcagacttctggcctccggaactgtgttctatgtaggt
aaagttattctctgcatcgacttcatcatattctgtctccgattaatggccatcttcact
atcagccgaactctcggcccaaagataatcatcctcaggagaatgatgatggatttgttc
ttcttcatgtttctgctcagtatctgggttgtggcgtatggtgtggccaagcagggcatt
ttgattcacaatgaagacagactgaactggatcatgcgcggagctgtctatgagccctac
ctcatcatattcggcagtgttcccactaatatagacaacactcagtttgacctggacagc
tgtagtatgaatggctccgagcctctgaagcccaaatgtcccgtgctgaacgatgataac
atgccggccttcccagaatggctgactatcatcatgctctgtgtttatctgctcttcgcc
aacatcctgctgctcaacctcctcatcgccatcttcaactacacgttcgaggaggtccag
gacaacacagacaccatctggaagttccagcgctacgagctgatcaaggagtaccacagt
cgacccgctcttcctccacccttcatcctcctcagtcacctcatcctcttcatcagagca
gtgctgcagcgccactctccacagaaacacaagaccttcagacaggaactggagcagaat
gaggaatacgagctgttggcatgggaggcttacatgaaggacaactatctgtcatcgatg
cggcaggacaagagtcagagcgaggagcatcgtatccaggacatcgcagagaaggtcggt
gtgatgtcagagctcatggagagcgagcaggagagggtttctccctccatcacaaaacgc
ctggccacgcttgaagagcaggtctccgattccagcaaagtcttacaatggatcgtggac
gcgctgaaatctcagggattcgaatccaaaaggcagctgcctctgagtcgagagctcgca
gtcgtctcatcagccgctccagtggagagaagtgaacagcaccgcgtctgtgtgtccgta
ccaacgagaagctctgtgtcagatagcaaactgacataa
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