Carassius auratus (goldfish): 113054233
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Entry
113054233 CDS
T07313
Name
(RefSeq) protocadherin gamma-C5-like isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113054233
Cell adhesion molecules [BR:
caua04515
]
Cadherins
Protocadherins
113054233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_CELSR2_9th
Cadherin_C_2
BppU_N
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
113054233
NCBI-ProteinID:
XP_026075397
Ensembl:
ENSCARG00000008190
UniProt:
A0A6P6KVW4
LinkDB
All DBs
Position
35:complement(7449157..7550260)
Genome browser
AA seq
995 aa
AA seq
DB search
METRNCHLGGTPSFCSNGESSGFKIKMTKRVSFRCRRNYLLFFFLFLLLWSMTEGQTRYS
IPEELNMGAVVGNIAKDLGLKISELYDRKLRIASESGKQYFRVDLRRGEIVVNERIDREI
LCGKHANCLLPLQIVIEEPLQLYRVEVDIQDINDNYPHFQSTDRVLKIAESTVPGMRFPL
ESAIDPDVGSNSLKSYTLSKDECFSLKVKDLGDGRKVPELVLEKPLDREKKPMHQLMLTA
LDGGTPARSGTSQINITVLDNNDNNPVFEKRVYKVAINENAKQGTSFLMVKATDLDEGPN
GDIQYSLGEHTSDELRSLFRINEKTGEIILNGELDYETTPVYNIEVSAKDRGVPEMEGHC
MVEIEVADINDNPPQIVLTSKPNPVREDAPSGTVVALISSRDIDSGDNGKVSLQTQSDIP
FILKPSFSNEYSLVTNGVLDRETYPEYNVEITAFDSGSPALNSKTIIPVKILDVNDNAPK
FPDNVYYVYVKENNTPGSIICSVSAQDVDVGVNGKISYSIENPKNWDTPISSYMYINSEN
GSIFSMLSFDFEKIKVYEVIVQAKDHGTPSLSSNATVYVFILDHNDNAPAVIYPSTSMGS
VTHQRMPRSAKAGHLVTKVTAVDADSGHNAWLFYRLAEATDASLFSVNLHTGEVRTKRAV
SEHDDSSQKLLIEVKDNGEPLQSTTVTVDILIEDGFHEPISDYREKTIEPNKKSGKITLY
LMISLASVSLLCLLTCFILLVKCARGIRGDSSCCIRRTNSDYKNPNRNLQIQLNTDGPIK
YVEVLGGDMMSQSQSFGSYLSPMSEFSDLTLVKPSSTTNFTDTLNVLDSSLPDSAWTFES
QQQKPPNADWRFPPNQRPGPSGQHRFHTLQQRWTPYEKSRAGAHPDEAGASAGVIAGTRP
WPNPPTEAEQFQAMMVAANVSEATATLGPRYNPQYGPDYRQNVFIPGSTATLMANPQQQV
PQQALPPPQALPPVEAPKAAQTPASKKKPTKKDKK
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcgaaactgtcatcttggtggtacccctagtttttgttcgaacggtgaatcg
tctggatttaaaatcaaaatgacaaagagggtgtcattcagatgtcggaggaattatttg
ctcttcttttttctctttcttcttttgtggagtatgacagaaggacagactcgctactca
attcccgaggaattaaatatgggtgctgttgttggaaatattgcaaaagatttaggtttg
aaaatatctgagctgtatgaccgtaaattgcgaatagcttctgaatcaggtaagcagtat
ttcagagtggatttacgaagaggagaaattgtggttaatgagagaatcgacagagaaatc
ctttgtggaaaacacgcaaattgtctactgcctcttcaaattgttatcgaggagccttta
caactttacagagtggaagtcgacatacaggacattaatgacaattatccgcattttcag
tctacagaccgcgttttaaagatagcagaatccactgtccctggaatgcgctttcctttg
gagagcgcaatagacccagatgttggcagtaattccttgaaatcgtatactttaagcaaa
gacgagtgttttagtttaaaagtaaaagaccttggagatgggcgcaaggtacctgaatta
gtactggagaaaccccttgaccgcgagaagaaaccgatgcatcagcttatgctaactgcg
ttagacggggggactccggctagatctggaacttcacaaataaacattactgtcctggat
aacaatgacaacaaccccgtatttgagaaaagagtttacaaagtggccattaatgaaaac
gccaagcaaggaacgtcatttttaatggttaaagcaacggacttagatgaaggtcctaat
ggagatatacagtattctttaggggagcacacatctgatgagttgcgctcactgtttcgt
attaacgagaaaaccggcgaaattatcctgaacggtgagttagactatgagaccactccg
gtttacaacattgaggtcagtgccaaagatagaggggttcccgaaatggagggccattgt
atggttgaaattgaagttgcagatattaacgacaacccaccacaaatagtgctgacatct
aaaccgaaccctgtgcgggaggacgcgccaagcgggacagttgtagcgttaataagctca
cgggacatcgactctggtgacaatggaaaagtcagtctgcagacacagtctgatattcca
tttattttaaaaccatctttttcaaacgaatattcgttggttacaaacggcgttttagac
cgggaaacttacccggagtataacgtggaaatcactgcatttgactcgggctcgcccgct
ttaaatagcaaaacaataattccagttaaaattcttgatgttaacgacaatgccccaaag
ttccctgataacgtgtattatgtgtacgtgaaagaaaataacactccaggctctattatc
tgttcggtatctgctcaagacgttgatgtcggcgtaaatggtaaaatatcatactctatt
gagaaccctaaaaattgggatactccaatatcctcgtatatgtacataaactctgaaaat
ggaagcatatttagcatgctttcgtttgactttgaaaaaataaaagtgtatgaggtcatc
gttcaggctaaagatcatggcactccatctttaagtagtaacgcgacagtgtatgtgttt
attctggaccataatgacaacgcacctgctgtcatttacccgtccacgtccatggggtct
gttactcatcagaggatgccccgttctgctaaagcaggacacctcgttactaaggtaaca
gcagtggacgcggactcgggtcataacgcctggctgttctacaggctcgcggaggccacg
gacgcgtctctgttcagtgtcaatttacatacgggagaggtgaggactaaacgcgctgtt
tcagagcacgatgactcctctcagaaactgctgatagaagtaaaggataatggagaaccg
ctccagtccaccacagtcacagtggatatactgatagaggacggctttcatgaacccatt
tcagactacagagagaaaactatcgagcccaacaagaaaagtggcaaaattactttatat
ctaatgatctctttggcttccgtgtccttgttgtgtctgttgacgtgtttcatcttacta
gtgaaatgtgcgcgaggcattagaggcgactcaagctgctgtatcaggaggacaaactca
gattacaagaaccccaacagaaacctgcagatccagctcaacactgacggacccattaaa
tatgtggaggttctgggaggagacatgatgtctcagagtcagtcctttggctcctatctc
tctccaatgtcagaattcagtgatctcaccctcgttaagcccagcagcaccacaaacttt
acagacacgctaaacgtgcttgattcgtcattaccagacagcgcgtggacgttcgagagc
caacagcaaaagccccctaatgctgactggagatttcccccgaaccagagacctggaccc
agtggccaacacaggttccacaccctgcagcagagatggactccatacgagaagtccagg
gctggagctcatcctgatgaggcaggtgccagtgctggtgtgatagcgggaacaagaccg
tggcccaacccccctaccgaagctgaacagttccaggcgatgatggtggcagccaacgta
agtgaagccactgcaactctcggccctcgctacaatccacagtatggcccggactaccgc
cagaacgtcttcatcccgggtagtaccgccactctcatggccaaccctcagcaacaggta
ccccagcaggcccttccccctccccaggccctccctcctgttgaagcccccaaggcagct
cagactcctgccagcaagaagaagcctactaagaaagacaagaagtaa
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