Carassius auratus (goldfish): 113054479
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Entry
113054479 CDS
T07313
Name
(RefSeq) telomerase-binding protein EST1A-like isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113054479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113054479
03032 DNA replication proteins [BR:
caua03032
]
113054479
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
113054479
mRNA cycle factors
Common to processing body (P body) and stress granule
113054479
DNA replication proteins [BR:
caua03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
113054479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
113054479
NCBI-ProteinID:
XP_026075847
Ensembl:
ENSCARG00000024222
UniProt:
A0A6P6KX39
LinkDB
All DBs
Position
35:complement(12877292..12893635)
Genome browser
AA seq
1562 aa
AA seq
DB search
MADELERVRISAAEIRAEASSFTTHSDSVKELREEDKKQLQRDVKCPDLHWYKPDTVNPC
RHKDSAEGASSDPVHLPDDCVFGNDTKMPDCSPSSPGCSRVSTGEFPNDHSQSEVNFNSK
EHVGVVNHQLMDVNSVKSIEGAGLPRSPKQSRKMRKPDREIYQPGGRRSQVHKETRVSKE
LDGDRKRGEEVSVKSTETITKCEKEEKRRNRRGKDGRTKQESRGTVESPNKNENIVESVT
GKVSSLHLESEESKDGAGKDGTNRRKPSGEGQRSQAGGGNEVTGEDKKMERGNGKSRAGR
EKGNNQVFAKKKEGEGVGNGSEADQPEGKKQRSVGGKEASRDQNMNHEKQQGNRSKVQGK
LSDRTDSNRVNSASKRYSQSDIRRPRYRTYSTSSASSGTSMDGLAEAERLRGEGHQLAAR
TAERTTGQKEFIRGSQGRPRRRTARTLSSTDSLEENEVWEREDRRGRVADEAKRTHKGPE
GGGKGQRAPASSGRGGILRVSLDKHLSEEQASRKNPRGRGRGILVLPAHTDLTLTPEPGP
QLGGMRGGMGLSRGRGGRGGGTRRLWDPNNPEKKPALVSSQQSQHASLQQALYLQQGGCG
PLHFLDTDDESTGSPPVRQGEFFQNQQAAAMAYYKFQNSDNPYCYPQSAKSSNTPPRYPY
PYHIPYQIPGSNGMYPASVPPFYGPYGQSGPGYPSPVGSGLTPEEAEVQTRGELGKLLRL
ADSQELQLSNLLSRERLSQEGLERMAQLRAELLTLYERVILTDIEFSDSQNLDQALWKNV
FYQVIERFRQLLKDQTSDTAPQIKTMLMTILEEGTVFFDSLLQKLQTVFQFKLEDYMDCM
AIRARPLRKTVKYALISAQRCMICQGDIARYREQASDSANYGKARSWYLKAQQIAPKNGR
PYNQLALLAVYTKRKLDAVYYYMRSLAASNPILTAKESLMSLFEEAKRKADQIECRRKQE
VDGGTRGPRGHVGGRRGEDGTRVEVWIRPTVHLGTSRPTGSESGKDSEQDGELGALSPSD
LNKRFILSFLHTHGKLFTKVGMESFPAVASRVLQEFRALLQHSPSPLGSTRMLQIITINM
FIIHNAQIRAEGQGETRSVLEEQTISLGLAMFGLLVQRCTELLQETPPEPIPAEELGEFE
EMDEEEGMVRVSVFPPDLRELLPSMKVWSDWMLGHPDKWNPPPCSIQGAPDVWQCLANLC
NSLAHVYHGEVLLYKADVDGEGDEELRVLQLEEDKMLSGFVPLLAAPQEACYIDQGTDKA
IAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYISMATPPTPSVNKENKVQMQEQEDDVI
VEESSLSASEGEIDGEMEGDGSEDDIRELRARRHALTHKLAQQQKRLDKIQAVLQTGGQL
EIEIRPLYLVPDTNGFIDHLEGLRKLLSCGTYILVVPLIVITELDGLAKGQDSREGISNG
AHARQVQERARAAVIFLEKAFEARDPCIRALTSRGNTLESIAFRSEDTSGQKGNNDDVIL
ACCLHYCQDKAKGFMPAERNGSVRLCREVVLLTDDRNLRVKALTRNVPVRDIPAFLIWAQ
VG
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgagctggaaagagtacggatttcagccgcggagatacgagcagaagcgtcg
agtttcacaacacacagcgacagtgtaaaagaattgcgagaggaggataagaagcaactg
cagcgagacgttaaatgtccagacttgcattggtacaaacctgacactgtcaatccctgc
agacataaagacagcgcagaaggagccagctcagaccctgtgcatctaccggatgattgt
gtttttggtaatgacaccaaaatgcctgactgctcacctagcagtcctggatgctctcgc
gtaagcactggggagtttccaaatgatcacagtcaatctgaagttaattttaactctaaa
gaacatgtaggtgttgttaaccaccaacttatggatgttaattctgttaaaagcattgaa
ggagctggtttgcccaggtcaccgaagcagtcacgaaagatgcgtaaacctgaccgtgag
atatatcagccaggggggcgaaggtctcaagtacacaaagagaccagggtgagcaaagaa
ttagatggggatcgaaagagaggggaagaagtgagtgtaaaatctactgaaacaattact
aagtgtgagaaagaggaaaagcgtagaaacaggcgagggaaagatggcaggacaaaacaa
gagtccaggggaactgtagaatccccaaacaaaaatgagaatatagtagagagtgtcacc
ggtaaagtcagcagtctccatttagaatctgaggaaagcaaagatggagctgggaaggat
ggtacaaacaggagaaaacctagtggggaagggcaaagaagccaagcgggtggagggaat
gaagtgactggagaagacaaaaaaatggagaggggtaatgggaaatctagagcaggaagg
gaaaaaggtaacaaccaggtctttgcaaagaaaaaggaaggggagggggtaggaaatggc
tcagaagcagatcaacctgaaggaaaaaagcagagaagtgttggcggaaaggaggcgagt
cgtgaccagaatatgaaccatgaaaaacaacaagggaacaggtcaaaagtgcaaggaaaa
ctatctgatagaacggattcaaaccgagtcaactctgcctcgaagcgatactctcagtca
gacatccggcgtcctcgataccgcacctacagcacgagttcggccagtagcgggaccagt
atggacggtctggctgaagctgagagactcagaggggagggccatcagctggccgcacgc
actgcggagaggaccactggacagaaggagttcatccgagggagccagggccgcccaagg
agacggacggcacggacattgtcatccacagattcactggaggaaaatgaggtgtgggag
agagaagatcgaagaggcagggttgctgacgaagccaagagaacccacaaaggtcctgaa
gggggcggaaaagggcaaagagcacctgcatctagcggtcgaggaggaattttaagagtt
tctttggataagcatttaagcgaggagcaagcaagtcgaaaaaaccctagaggtcgtggg
aggggcatcctagtgcttcctgcccacactgatctaactttgacccctgaacctgggcct
cagcttggaggaatgagaggaggaatgggcctgagccgaggaagagggggccgtggagga
gggacaagacgcctttgggatccaaataatccggaaaagaaaccagcactggtatcaagc
caacaatcccagcatgcatctctccagcaggctttgtacttgcagcagggtggatgtggg
ccactgcactttctggacactgatgacgagagcacaggaagtcctcctgtccgccagggc
gagttttttcaaaaccagcaagccgctgccatggcttactacaaattccagaattcggac
aatccctactgttatccgcaatcagccaaatcctcgaacaccccaccacgttatccttac
ccatatcacattccctaccaaattcctggctctaatgggatgtaccctgcctctgtgcca
ccattttatggaccttatgggcaaagtgggccaggttatccctctccagtgggatctggt
ctcactccagaagaggcagaggtgcagacgagaggagagctgggaaagttgcttcggctg
gctgacagtcaggaactccaactcagtaacctgttgtcccgggaacgactgagccaggag
ggtttggagaggatggcccagctcagggctgaactcctgacgttgtacgagcgggtgatt
ttgacagacatagaattctccgactctcaaaacctggatcaggctctgtggaagaatgta
ttttaccaagtgatagagaggtttaggcagctgctgaaggaccagacgtcagacaccgcc
ccacagatcaaaaccatgctgatgaccatattagaagaggggacagtattctttgattcg
ctgctacagaagttgcagactgtatttcagttcaagctcgaggactatatggactgcatg
gctatacgagcaagacctctacgcaagacggtgaagtatgctctgatcagtgcccagcgc
tgcatgatctgtcagggggatattgcgcgttatcgtgaacaggctagtgactctgctaac
tacgggaaagcacgcagttggtatctaaaagctcagcagattgctccaaaaaacgggcga
ccctacaaccagctggccctactagcagtgtatacaaagcgaaagctggatgctgtatac
tattacatgcgtagtctagccgccagtaacccaatcctcacagccaaggagagcctgatg
agtctgttcgaggaagccaagcgcaaggctgaccagattgaatgcagacggaagcaggaa
gtagatggaggaacccgtggtccccgaggtcatgtaggtgggcgtcggggagaggacggc
actcgtgtggaggtctggatacgtcccaccgtgcatctgggcacttctcgtccgacaggc
agtgaatcgggcaaagactctgagcaggacggagagctgggagctctgagtcccagtgat
ctcaacaagaggtttattttgagtttcctgcatactcatggaaagctcttcactaaagta
gggatggagagttttcctgctgtagcgagtcgagtgttgcaggagtttcgggccctcctc
cagcacagcccctcccctctcggcagcacacgcatgttgcagatcatcactattaacatg
ttcatcatccataacgcacagatcagagctgaagggcagggtgaaactcggtctgtattg
gaggagcagaccatatctcttggtttagctatgtttggtctccttgtgcaacgttgcact
gaactccttcaagaaacacctcctgagcccatcccagcagaagagctgggggagtttgaa
gaaatggacgaggaggaggggatggtgcgggtgtctgtcttccctcctgacctcagagag
ctgctccccagcatgaaggtctggtctgactggatgctcggccacccagacaagtggaac
cctcctccctgcagtattcagggggctccagacgtgtggcagtgtcttgcaaatctgtgc
aactctttggcacacgtgtatcatggtgaggttctgctgtataaagctgatgtagatgga
gaaggagatgaggaactccgagtcctacagctggaggaagacaaaatgctctctggcttt
gtcccactgctagctgccccacaggaagcctgctatatagaccaaggaacagataaggct
atagcagctgactgtaagagagtgaccgttctgaagtacttcctggaagctctgtgtggg
caggaagagccgctgctggcttttaaaggaggaaagtatatttccatggcaacacctcct
acacccagcgtaaacaaagagaacaaggtgcaaatgcaagaacaggaggatgatgtcata
gtggaggaatcgtctctctctgcatcagaaggggagatcgatggagagatggaaggagac
ggaagtgaggatgatatcagagagctgagggcacgacgtcacgctctcacacacaagctg
gcacagcagcagaaacggctggataagatacaggctgtcctgcagacaggtgggcagctg
gagattgagatcaggccactctatctggtcccggacacaaacggcttcatagatcatctg
gagggcctgagaaagcttctgtcctgtgggacgtacatcctggttgtgcctcttattgtg
atcacagagttggacggtctggctaaagggcaggacagtcgtgaggggatcagtaatggt
gcccatgcccgacaggtgcaggaaagagccagagcagcagtcatatttctggaaaaagca
tttgaagctagagatccctgcatcagagcgctcaccagcagaggaaacacactggagtcc
attgccttccgcagtgaggacacgtctggacaaaagggcaacaacgatgatgtcatcctg
gcctgctgtctgcactactgtcaggacaaagccaagggcttcatgcctgctgagagaaat
gggtcagtcaggttgtgcagagaggtggtcttgctcacagatgaccgcaacctgcgagtc
aaagctctcacacgtaatgtgcctgtccgggacatcccagcgttcctgatctgggctcaa
gtgggctga
DBGET
integrated database retrieval system
