Carassius auratus (goldfish): 113056379
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Entry
113056379 CDS
T07313
Name
(RefSeq) pleckstrin homology domain-containing family M member 1-like
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04140
Autophagy - animal
caua04142
Lysosome biogenesis
caua05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
113056379
04140 Autophagy - animal
113056379
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113056379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113056379
Membrane trafficking [BR:
caua04131
]
SNARE
SNARE associated proteins
Others
113056379
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_13
PH_11
Motif
Other DBs
NCBI-GeneID:
113056379
NCBI-ProteinID:
XP_026078917
Ensembl:
ENSCARG00000006133
UniProt:
A0A6P6L5H6
LinkDB
All DBs
Position
37
Genome browser
AA seq
1029 aa
AA seq
DB search
MLATQTPESGPEARDGKQWIKEKIARTLKVLQKRYITTDTAVTSEDLEANLLCCALEAVF
IHGIKSKFIRFDGSHARKGGSRGALPQPVFWSLLKSVTHRDVVQELERLSFINSDIGRCR
AWVRLALNDGLLECYLTSLFREGSNLGSYYQPGALLLDPEDREVLLTLLQCLSSMTFQLS
YKSAMLNEWTNTPLVLAGLCPPTPADEQLVGPKRKESWDTVSQSSGGSGGSDWAQEVLQR
EPRKEQSEGCEPNTLLTSSNLSLDTSGSSPLSSSLSSDSLLQGQELRSPEKEPWSCDTEI
SQHTQQKITASEESGCSDQDLKEDLDVSVPASDSAARADDTSTHTPPAAAQDTHQSDAHI
SEQSKASSEKMSAETEEGTAEESETLDETVIETAESEQKKDSSDDTGTEKTSDPDAVSPE
TPTVSSSVEQSQHAAYRRAASTVSRKTSTDSLYSSCISTSWISEDDFYKPEEMSSSEAYA
VIDVVQMNGQVTLTSEPDSVQPPPSVVHRRPNGLRNPFRGLLKLGQLQRRGAVGMWRDYY
CELSPFELRLYTNAEERICYENLSLLRCEDVHLSSSNEGRFRLSFSGKRIYLRAPSRGEA
EDWVDRIVEAINKLRPTMRDEQWEVLHSSSDQDVPSQTPSTPKHIISGLPDPPPLDWTRL
KDPEPDAVKEAVVYQNLEEKGWRSVLLSLSLEALRGYRVQGDSKVPFFSYSIGSIRDVVP
DVSLGSPAFFKVLTAQETLTLRAESGEAARGWRSLIRGALDSYLETEDDGVSAVVQHRLK
GDGGLLSHLSTVPNERGLDAQNFKCAGCPRQIGMSLGRARLCEFSGQYYCERCHQGDTTI
IPSRMLHNWDLTMHEVSKQAFKMLTQIEHEPLLNLDLLTPDLFDHTDIMAKVRSLRQRLR
FLGDYILICRSGISRQIQPRLQQRTYLLDNSDLYSVLDLQQIADEHYESYLQSLIQIGTK
HVLHCDLCTQRGFICQICNTDNIIFPFQFDSTTRCNVCKTVFHSSCKAKCPVCPRCVRIQ
KYMERDLED
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgttggccacccaaacacctgagagcggcccggaggcaagagatggaaaacagtggatc
aaggaaaagatcgcacggaccctaaaagtcctgcagaagcggtacatcaccacagacacg
gcggtcaccagcgaggacctggaggctaacctgctgtgttgtgctttggaggcggtcttc
atccatggaatcaagagcaagtttattcgatttgatggaagtcacgcgcgcaaaggaggg
tcgcgaggagcccttcctcagcccgtcttctggagcctgttgaagagcgtcacccacagg
gatgtcgttcaagaactggagcgtctaagcttcataaactcagacatcgggcgctgcaga
gcatgggttcgtctggcgttaaacgacgggcttctggagtgttacctgacctcgctgttt
cgcgaagggtccaacttgggctcgtactatcagcccggggctcttttgctggatccggag
gaccgtgaggttctcctcaccctcctgcagtgtttgtcctccatgaccttccagctctct
tataaatcagcaatgctgaatgagtggaccaacacaccgctggtcctcgcgggtctgtgt
cccccaacgccagccgacgagcaacttgtaggtcccaagcgcaaagagtcttgggatacg
gtctcccagtcatccggaggttctggaggctcagactgggctcaggaggtgctccagagg
gagcccaggaaagagcagagcgagggatgtgagccgaacactctgctgacgtcgtcaaac
ctgagtctggacacgtccggatcatcaccgctgtcctccagcctgagctctgatagtctg
ctgcagggtcaggagctcaggagtccagagaaggagccctggagctgtgacacggagatc
agccaacacacacaacagaagatcaccgcttcagaagagagcggttgctcggatcaggac
ttgaaggaagacttggatgtgtccgtaccagcttcagactctgcagctcgagctgatgat
acgagcacacacacacctccagcagctgcacaggacacacatcagtcagatgcacacatc
tcagaacaatctaaagcaagctcagaaaagatgtcagctgagacagaagaagggacagcg
gaagaatccgagactctagatgaaaccgtcatcgagactgcagaaagtgagcagaagaaa
gactcctctgatgatactgggaccgaaaagacctctgaccctgacgctgtttctccagag
acccctaccgtctctagctcagtggagcaatcccagcatgccgcatacagacgcgccgcg
agtaccgtcagtaggaaaacctccacagactctctctattcctcctgcatatccacatct
tggatatcagaggatgacttctacaagccagaagaaatgagcagttctgaagcgtatgcc
gtcattgacgttgtgcagatgaacggacaggtgacgcttacctctgaaccagacagcgtc
cagcctccacccagtgtagtgcaccggagacccaacggtcttcgtaacccgttcaggggt
ctgctgaagctgggtcagctgcagcgccgcggtgcggtgggcatgtggagggattattac
tgcgagctctctccgtttgagctgcggctttacaccaacgcagaggagcgcatctgctac
gaaaacctgtccctgctgcgctgtgaagacgtccacctgtcctccagtaacgagggacgg
ttccggctctccttttcgggcaaaagaatctacctgcgtgcaccgtctcgaggagaggcc
gaggactgggtggatcgcatcgtggaggccatcaacaaactacggcccacaatgagagat
gaacagtgggaggtgctccactcgtccagcgaccaggacgtcccctcacagacaccctca
acccccaaacacatcatctcaggacttccagatcctccaccgttagattggacccgtctt
aaggaccccgagccagatgctgtgaaggaagcggtggtctatcagaacttggaggagaag
ggttggcgctctgttttactctcgctctccttggaggccctcagggggtaccgggtccaa
ggggactccaaggtgcccttcttctcttactccattgggagcatcagggatgtggttcct
gatgtttctttaggaagtcctgcgttctttaaggttctgactgcgcaggagactctgacg
ctgcgggcggagagcggagaggcagcgcgaggatggaggagtctgatcagaggagcgctc
gactcgtatctggagacggaggatgatggcgtctcagcagtggtccaacatagactgaag
ggggatggggggctgctgtctcacctgtctactgtcccgaatgagaggggactagatgca
caaaactttaaatgtgcaggttgccctcgtcagatcgggatgtctctggggagagccagg
ctctgtgagttctcgggtcagtattactgtgagcgctgtcatcagggagacaccaccatc
atcccctcacgcatgctgcacaactgggacctcacaatgcatgaggtctcaaaacaagcc
tttaagatgctgacacagatcgagcacgagccgctcctgaaccttgacctcctgacccct
gacctgtttgatcacactgacatcatggctaaagtacggagtctgagacagaggctgcgt
ttccttggagattacatcctcatctgccgcagtggcatcagcagacagatccaacccaga
cttcagcagcggacatacttactggataacagtgatctctacagtgtattggacttgcag
cagatcgcagacgagcactacgaatcttacctgcagtctctgattcagattgggaccaag
cacgtgctccactgtgacctttgcacccaaaggggctttatatgtcagatctgcaacacc
gacaacatcatcttcccttttcagttcgacagcaccaccaggtgtaacgtctgcaagacc
gtgtttcattcctcctgtaaggccaagtgtccggtctgtccacgctgcgtccgcatacag
aagtacatggagagggacttggaggactga
DBGET
integrated database retrieval system
