Carassius auratus (goldfish): 113057722
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Entry
113057722 CDS
T07313
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP-like isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04120
Ubiquitin mediated proteolysis
caua04210
Apoptosis
caua04217
Necroptosis
caua04510
Focal adhesion
caua04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113057722
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
113057722
04217 Necroptosis
113057722
09144 Cellular community - eukaryotes
04510 Focal adhesion
113057722
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
113057722
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
caua01002
]
113057722
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113057722
03029 Mitochondrial biogenesis [BR:
caua03029
]
113057722
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113057722
Peptidases and inhibitors [BR:
caua01002
]
Peptidase inhibitors
Family I32: IAP family
113057722
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113057722
Mitochondrial biogenesis [BR:
caua03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
113057722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
UBA_BIRC2-3
Motif
Other DBs
NCBI-GeneID:
113057722
NCBI-ProteinID:
XP_026081005
Ensembl:
ENSCARG00000013360
UniProt:
A0A6P6L8Y1
LinkDB
All DBs
Position
39:3924938..3933385
Genome browser
AA seq
452 aa
AA seq
DB search
MAQSSQDGEIVADDGWSSMNNRVNSFQRFPHSDEFSAERLARAGFYFTGQADRVCCFSCH
ATVEDWNQGDTPLNRHQQASPNCTFLSCAHGLRVSNFIQSPDYDEEAEAREFQLRTGEVL
DQTIYPSKPYMKSEEARLNTFGNWPASAPVQPEDLAAAGMYYLGTEDIVECFCCGQKLAG
WEPGDDAWGEHAKHYPNCFFILGHDVGNVPLQTPRPRLNGQRASMETFEGRLESFRDRQH
PIDPERLARAGFYSTGEQDQVLCFRCGGGLKTWRPEEDPWEEHARHYPGCSFLQAEKGEE
YVNSVQLRYPKGDHSRSSQNGFTSDEHIAQKVPQSEIADKAVEMGFDRTIVDLTILQKLR
QNANGYTSVEALIEDISAQESVCTMPEKSEDPMTKLEKLQREKLCKVCMDSDIDIVFIPC
GHLVTCQKCSESLNKCPICCAAITQKIKTYNA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtcaagtcaagatggagaaattgttgctgatgatggatggtcatccatgaat
aatcgtgtgaattccttccagcgcttcccccattctgatgaattttcagccgagcggctg
gccagggcaggcttttattttacaggtcaggcggacagggtgtgctgtttcagctgccat
gcgacagtggaggactggaaccaaggggacaccccactgaacagacatcagcaagcatct
cccaactgcacgttcctcagctgtgctcatggcttgagagtctccaacttcattcaaagc
cctgattacgatgaagaggccgaagccagggagttccagctccgcacgggagaggtgctg
gatcagaccatttatcccagtaagccatacatgaagagtgaggaagctcggctgaatact
ttcggtaactggcctgcaagcgctccagtccagcctgaagacctggcagcagcaggaatg
tattacttgggcacagaagacattgtggagtgcttctgttgtgggcagaagctggcagga
tgggagccaggtgacgatgcctggggtgaacatgcaaagcactacccaaactgcttcttt
atcttgggccacgatgtgggcaatgttccgctgcaaacacctagacccaggctgaatggg
caaagagcctctatggagacttttgaggggcgtcttgaaagcttcagagacagacaacat
cccatagaccctgagagactggcaagagccggtttctacagcacgggagaacaggatcag
gtgctctgctttcgatgtggaggaggactgaagacctggaggcctgaagaagacccttgg
gaggagcatgccaggcactatccaggctgcagtttccttcaggcagaaaaaggagaagaa
tatgtcaacagtgtgcagctgagatatccaaaaggagaccattcaagatcaagtcagaat
ggctttacaagtgatgagcatattgctcagaaagtcccgcagtcagagattgcagataaa
gctgtagaaatgggttttgatcgaaccatagtggatctcacaattctgcagaaattacgt
cagaacgccaatggttatacttcagtagaagcacttattgaagacatcagtgcacaggaa
agtgtctgtaccatgcctgagaaatctgaggaccccatgacgaaacttgagaaactccag
agggagaagctgtgtaaagtctgcatggacagtgacattgacattgtcttcattccctgt
ggacacctggtcacctgtcagaagtgttcagaatccctgaacaagtgtcccatctgttgt
gccgccatcacgcagaagataaagacatacaatgcctga
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