KEGG   Carassius auratus (goldfish): 113059372
Entry
113059372         CDS       T07313                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DO alpha chain-like
  KO
K06752  MHC class II antigen
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04145  Phagosome
caua04514  Cell adhesion molecules
caua04672  Intestinal immune network for IgA production
caua05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:caua00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    113059372
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    113059372
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    113059372
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    113059372
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:caua04147]
    113059372
Exosome [BR:caua04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113059372
  Exosomal proteins of epithelial cells
   113059372
  Exosomal proteins of breast milk
   113059372
SSDB
Motif
Pfam: C1-set Ig_3 C2-set_2 Ig_2 I-set ig MHC_II_alpha
Other DBs
NCBI-GeneID: 113059372
NCBI-ProteinID: XP_026083620
Ensembl: ENSCARG00000055850
UniProt: A0A6P6LGC8
LinkDB
Position
41:complement(24566198..24570845)
AA seq 212 aa
MMATGFELEFDGEELWHVETNDFTAKQRLNAGDWTLDRNLPSVAHFSIGSCFYNIPRCIT
GEKNPSESMDLSTVPPSTQLYTKSDVKLGVENTLICSVTGVHPPPVNISWMRNGEPVNEQ
DVSETQYYSNPDFSLRLFSHLNFCPKRGDIYTCSVRHRGLERDITRFWEVEVPEDSQEVE
VVVLVIGILVGFLGFVLGIVIVVMSKLELRPE
NT seq 639 nt   +upstreamnt  +downstreamnt
atgatggccactggttttgagctggagtttgacggtgaggagctctggcacgtcgagact
aatgatttcacagcaaagcaacgtttgaacgcaggcgactggacccttgaccgcaatctg
ccttctgtagcacacttctccatcggcagctgcttctacaatattcctcgctgcatcaca
ggagagaaaaatccctccgaatcaatggatctgtccacagttcctccgtctacgcagctg
tacaccaagagcgacgtgaagcttggtgttgaaaacaccctcatctgttcagtgaccggc
gtccacccgccgccggtgaacatctcatggatgaggaacggcgagccggtgaatgagcag
gacgtcagcgagacgcagtattactccaatccagacttcagccttcgcctgttctcccac
ctgaacttctgtcccaagagaggagacatctacacctgcagcgtgcgacacagaggactg
gagcgggacatcaccaggttctgggaggtggaggtgccagaggactctcaggaggtggag
gtggtggtgcttgtgatcggaattcttgtgggatttctgggatttgtgctgggaatcgtt
atagtcgtaatgagcaagctggagctgcggcctgaatga

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