Carassius auratus (goldfish): 113060422
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Entry
113060422 CDS
T07313
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113060422
Membrane trafficking [BR:
caua04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113060422
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
113060422
NCBI-ProteinID:
XP_026085111
Ensembl:
ENSCARG00000019825
UniProt:
A0A6P6LNR4
LinkDB
All DBs
Position
42:2866738..2905576
Genome browser
AA seq
1778 aa
AA seq
DB search
MKRSKHRASKDDGKGQDEAAILETEDVRMPDPDTISLASVTAVTTNVSNKRSKPDIKIEP
SAGRPVDFQVSVTVVEARQLVGLNMDPVVCVEIGDEKKYTSMKESTNCPYYNEYFVFDFH
VPPDVMFDKILKVSVIHSKNLLRSGTLVGSFKLDVGTVYTQPEHQFFHKWATLCDPDDIT
AGCKGYVKCDIAVVAKGDTIKTQHKANETEEDDIEGNLMLPEDVPAERQWARFYLKIYRA
EGLPKMNTSIMANVKKAFIGENKDLVDPYVQVLFAGQKGKTSIQKSSYEPIWNEQIVFTE
QFPPLCRRMKVQIRDSDKVNDVAIGTHFIDLRKIANDGEKGFLPTLGPAWVNMYGSTRSY
TLMDEYQDLNEGLGEGVSFRARLLISLSVEILDTSSPEVMSSTEVQVEGIPNISDNATGK
TEEFFLFGCFLEATMIDRKIGDKPINFEVTIGNYGSELDTPTKPKTKKGKGGDGDDEESE
LIHGSSDEEVDDAGDMTSVSSTPPMKPVITDRNYFHLPYFERKPCIYIKSWWQDQRRRLY
NANIMDRIADKLEEGLNDVQEIIKTEKAYPERRLRGVLEELSNGCSTFVTLANNDQNQTG
KTKLDRERLKLCMQELENMGQQAKSMRSQVKKSTVKDKIKLAQNFLQKLRFFTDEPQHSV
PDIYIWMISNNKRIAYARVPSKDILFSSVEEETGKDCGKVQTIFFKLPGKKSFGPAGWTV
QAKTELYLWLGLNKQRKDYLNGLPNGFEENKAVKGPGIQSSPPISLMYTMKQIFQLRVHV
YQARSLFAADSTGLSDPFARVFFSTHSQVTEVLNETLCPTWDQLLVFDNVELYGEAGELR
DDPPIIVIEIYDQDTVGKADFMGRTFAKPLTKMSDEYYGPPRFPPQLEYYQIYRGNCTAG
EMLAAFELLQIGPAGKADLPPIDGPSDFDRGPILPVPIGIRPVLSKYRIEVLFWGLRDLK
RVNLAQVDRPRVDIECAGKAIQSALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRV
VDCRAFGRYTLVGSNAVASLRKFIYRPSDKSVSNWSAMDEVVIHTEPEPVVKKTETVVKL
DSASDAVVKVDMPDDEKGGKGKKKRKKDEEVEEEELDESMLDWWSKYFASIETLKEIIKT
KEAEAEEKEDFDSGEGTKKKRGKGSKNKAMPGEGVPEKKKHQVEELKIFNRELEYQFDRF
EDWLHTFNLYRGKCSDDADVEQNAADEDRLIGKFKGSLCIYKVPVFDEMSREMGFDSNMG
MFQNIPHNDPINIIVRVYVVRATELHPADINGKADPYIAIKLGTTEIKDKENYISKQLNP
VFGKSFDIEATLPMDSTLTVSIYDWDLVGTDDLIGETKIDLENRYYSKHRATCGLSASYA
IHGYNVWRDPLKPTQILAKLCKDGKMDPPQYGPGGRVKVANRVYTGPTEIEDENGLKKQT
DEHLALAVLNRWEDMPRIGCKLVPEHVETRSLLNPDKPGMEQGKIEMWVDMFPKDMPAPG
PSVDISPRKPKKFELRVIVWNTDEVVLEDDDIFTGEKSSDIFVRGWLKGQQEDKQDTDVH
YRSLTGEGNFNWRFIYPFDYLQAEEKIVISKKESMFSWDETEYKIPARLNLQVWDADHFS
ADDFLGAIELDLNRFPRGAKTSKQCSIDMVINEQDMPMVNIFKQKRIKGWWPFVARDEND
ELEITGKVEAELQLLTGEEAEKTPAGEGRNEPEPLEKPNRPDITFLWFLMPLKAVRHLIC
NQYKWLVIKIVLALMLLAILALFLYSMPGYMAKKLLGV
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagcaagcatcgagcctccaaggatgacggcaaaggtcaagatgaagcggct
attctggagacggaggatgtgaggatgccagatcctgacaccatctcactcgcatcagtc
actgccgtcacaaccaatgtctccaacaagagatcaaagcctgacatcaagatcgagcct
agtgctggaagaccagttgatttccaagtcagcgtgactgttgtagaggccagacagctg
gtggggctgaacatggatccagtggtgtgtgtagaaattggtgatgaaaaaaaatacacc
tcaatgaaggagtccaccaactgcccttactacaatgagtacttcgtttttgacttccac
gttcctcctgatgtcatgtttgacaagatcctgaaagtgtcagttatccactccaagaat
cttctgcgaagtggcacgctggtcgggagcttcaagcttgacgtgggcacagtttacaca
caacctgaacatcagttcttccacaaatgggccactttatgtgaccccgatgacatcact
gcaggatgcaaaggctatgtcaagtgtgacatcgcagttgttgcaaagggcgacacaatc
aaaactcaacacaaagcaaacgaaacagaggaggatgacattgagggtaatcttatgttg
cctgaagacgtcccggctgagcgtcagtgggcaagattctatttgaaaatctaccgagcc
gaggggttgcccaaaatgaacaccagcataatggcaaatgtcaaaaaagctttcattgga
gaaaataaggacttggttgatccgtacgtccaggtgctgtttgctggacagaagggaaaa
acttccattcagaagagcagctatgagccgatctggaatgagcagatcgttttcacagag
cagtttccaccactgtgccggagaatgaaggtccagatccgggattcggataaagtgaac
gatgtggccatcggaacgcacttcattgacctgcggaagatcgcgaatgatggagaaaaa
ggctttcttccaactcttgggccggcgtgggtcaacatgtacggctccacacgcagctac
acgctcatggacgagtaccaggacctgaatgaaggactaggggaaggggtttcgttcagg
gcccggctgctgatcagtctgtctgtggagatactggacacctcctctcctgaagtaatg
agctccactgaggtgcaggtggaggggatacccaacatctccgataatgccactggaaaa
actgaggagttctttctctttggatgtttccttgaggcaactatgattgacaggaagatt
ggagacaaacccatcaactttgaggttacaataggaaactatggcagtgaactcgatact
ccaaccaagccaaaaacaaagaaggggaagggaggtgatggtgatgacgaggagtctgag
ctcattcacggctctagtgacgaggaggtggatgatgctggagatatgacatcagtttcc
agcactcctccaatgaagccagtcatcactgacagaaactatttccacctcccgtacttt
gagaggaagccctgcatctatatcaagagctggtggcaggaccaaagaagacggctttat
aatgcaaacatcatggacagaattgcagataaattggaagaagggttaaatgatgtgcag
gagattattaaaacagaaaaagcctatcctgagcgcagactcagaggagtcctggaggaa
ctcagcaatggctgcagtacgtttgtaactttggcaaataatgatcagaatcagactggg
aaaactaaactggaccgggagagactgaaattatgcatgcaggaattggaaaacatgggc
cagcaagcaaagagtatgcgatcccaagtaaagaaaagcaccgtgaaagacaaaataaaa
ctggctcaaaacttcctccaaaaattgagattcttcactgatgagcctcagcatagtgtt
ccagatatttacatatggatgataagcaacaacaaacgcattgcatatgcccgcgttccc
tccaaagacatcctcttctcttctgtagaggaagaaaccggaaaggactgtgggaaagtc
cagactatctttttcaagcttcctggtaagaaaagctttggtcctgcagggtggaccgtt
caggctaaaactgagctgtatctgtggctcggcttgaacaagcagcgtaaggactactta
aacggcctaccaaatgggtttgaggagaacaaagcagtaaaagggcctggcattcagtcc
tcaccccccatcagcctgatgtacaccatgaagcagatcttccagctgagggttcacgtg
tatcaggctcgcagtctgtttgcggccgacagcaccggcctgtcagacccttttgccagg
gtctttttttctactcacagccaggtcacagaggtcctgaatgagacgttgtgtcctaca
tgggatcagctgctggtgtttgataatgtggagctctatggtgaggctggtgaactgaga
gatgatcctcctataatcgtcatcgagatctatgatcaggacactgtcgggaaagccgat
ttcatgggcaggacatttgcaaaacctttaaccaagatgtcagacgagtattatgggccg
ccacgcttccctcctcagctggagtattaccagatctaccgggggaactgcactgcagga
gaaatgctggcggcctttgaactgctgcagattggaccagctggaaaggccgacctgccc
ccaatagatggaccttcagattttgatcgtggtccaatcctgcctgttcctattggcatc
agacctgtcttgagtaaataccgaattgaggttctcttctggggcctgagggacctgaag
cgagtgaatctggctcaagttgaccgtccccgcgtggacatcgagtgtgcagggaaagcc
attcagtcagcgctgattcagaactacaagaaaaaccccaacttcagcactctggtcaag
tggtttgaagtggacctgcctgagaacgagctcctccaccctcctctgaacatccgtgtg
gtggactgccgggcttttggtcgttacacactagttggctctaatgcagtcgcatctcta
cgcaaattcatttacaggccatcggacaagagtgtcagtaactggtctgccatggacgag
gttgtgatccacacagagccagaaccagttgtgaagaagactgagacagtggtcaaactt
gactcagcgtctgatgctgtggttaaagttgatatgccagatgatgagaaaggtgggaaa
gggaaaaagaagcggaagaaggacgaagaggtggaagaggaggagctggatgaaagcatg
ctggactggtggtccaaatactttgcctccattgaaacacttaaagagatcattaaaacg
aaggaagcagaagctgaagaaaaggaagattttgactctggagaggggaccaagaagaag
agaggaaaggggagcaagaacaaagccatgcctggggagggagtaccagagaagaagaag
caccaagtcgaagagttgaagatattcaacagagagcttgaatatcagtttgaccgcttc
gaagactggcttcacactttcaacctttatcgaggcaagtgttcagacgatgctgacgtt
gagcagaatgcagctgatgaagacagacttattggcaaattcaagggatccctgtgcatc
tacaaagtccctgtatttgatgagatgtccagagaaatgggctttgattccaacatgggc
atgttccagaacatcccacacaacgaccccattaacatcattgtccgagtctatgttgtc
agggcaacagaactgcatcctgcagacatcaatgggaaggccgacccatatattgccatc
aagctcgggacgacagagatcaaggacaaagagaactacatctctaaacaactcaaccct
gtgtttggaaagtcttttgatattgaagcgacgctcccgatggattccaccctcaccgtg
tccatctacgactgggatttggtgggaactgacgacctgattggggagacaaagattgac
ttggaaaaccgttactacagcaaacacagggcaacatgtggtctcagtgccagctacgca
attcatggctataatgtgtggagggacccactgaagccaacgcaaatccttgccaaactc
tgcaaagatggaaaaatggatccgccccagtacggtccagggggacgagtgaaagtggcg
aacagagtttacacgggaccgactgaaattgaggatgaaaatggattgaagaaacagacg
gatgagcacctggctcttgctgtactaaaccgctgggaagatatgccacggatcggctgc
aaactcgtcccagagcacgtggagacgaggtctctcctgaatccggataaacctgggatg
gagcaggggaagattgagatgtgggtggacatgttcccaaaggatatgcctgcgcctgga
ccctctgtcgatatttcaccgaggaagccaaagaaatttgagctcagggtgatcgtgtgg
aacacagacgaagtcgttctggaggacgatgacatcttcacgggggaaaaatccagtgac
atttttgttagaggatggctgaaaggtcaacaagaagacaaacaggacacagatgtccac
tatcgctctctgacgggagagggcaatttcaactggcgcttcatttacccttttgactac
ctacaggccgaagagaaaatcgtcatctcaaagaaagagtccatgttttcttgggatgag
actgagtataaaattcctgcccgactgaatttgcaagtgtgggatgcggatcacttctct
gcagatgacttcctgggtgcaattgaactagacctgaatcgatttcctcgtggtgcaaag
acatcgaagcagtgctccattgacatggtgataaacgagcaagacatgcccatggtcaac
atcttcaaacagaagagaattaaaggctggtggccatttgtggcacgagatgaaaatgac
gagttggaaatcacaggtaaagtagaagcagagcttcagctgctgacaggtgaggaggct
gagaagactcctgctggtgaaggacgcaatgaaccagagcctcttgagaaaccaaaccgt
ccagacattacattcctgtggttccttatgccgctaaaggcagtccgccatctcatctgc
aaccagtacaagtggctggtcatcaaaattgtgttggcgctgatgcttctcgccattttg
gccctgttcctctacagtatgcctggctatatggccaagaaactcctgggggtctga
DBGET
integrated database retrieval system