Carassius auratus (goldfish): 113062811 Help Entry 113062811         CDS       T07313                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism caua  Carassius auratus (goldfish) Pathway caua04115   p53 signaling pathway caua04145   Phagosome caua04148   Efferocytosis caua04350   TGF-beta signaling pathway caua04510   Focal adhesion caua04512   ECM-receptor interaction caua04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:caua00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     113062811   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     113062811  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     113062811    04148 Efferocytosis     113062811   09143 Cell growth and death    04115 p53 signaling pathway     113062811   09144 Cellular community - eukaryotes    04510 Focal adhesion     113062811   09142 Cell motility    04820 Cytoskeleton in muscle cells     113062811  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:caua04131]     113062811   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:caua00536]     113062811 Membrane trafficking [BR:caua04131]  Endocytosis   Phagocytosis    Opsonins     113062811 Glycosaminoglycan binding proteins [BR:caua00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    113062811 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS Laminin_G_3 TSP1_CCN cEGF EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  113062811 NCBI-ProteinID:  XP_026088585 Ensembl:  ENSCARG00000025844 UniProt:  A0A6P6LVN5 LinkDB All DBs Position 45:complement(954273..967354) Genome browser AA seq 1171 aa AA seqDB search MKSAAIFLLLMLWSCESARVAEIRDDNSVFDLFELVQVPRKNHGVTLVKGDDPYSPAYKI LNPDLIPPVPESAFRDLIDSIHAERGFLFLVNFKQFKHTRGSLLTVEKKDGSGPVFEIVS NGKANTLDIVFSTENKQQVVSIEEADLAVGHWKNITLFVQDDRVQFYVGCEEVNTAELDA SIQTILTQETPGVASLRIGKGAVKDRFMGVLQNVRFVFGTTLEAILRNKGCHNSIMTDII TLDNPINGTRPAIRTDYTGHKTKDLQMICGFSCEDLAAMFKELKGLGVVVKELSNELRKV TEEKNMLMNRIDFYDGVCLHNGIVHKNKEEWTVDDCTECTCQNSATVCRKISCPLIPCAN ATVPDGECCPRCGTPSDSAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQ TRDCYLQECDKRFKQDGSWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQMEGKDCQGEGR QTERCEKSACPINGGWGPWSPWDTCSATCGGGVQNRKRLCNNPVPMYGGKDCVGEAKASQ RCNKQACPIDGCLSNPCFEGAQCTSFPDGSWKCGKCPTGYSGNGINCKDIDECKEVPDAC FEFNGVHRCENTVPGYNCLPCPSRYTGPQPFGRGVEDAASKKQVCTPRNPCLDGSHDCNK NARCNYLGHFSDPMYRCECKPGFAGNGHICGEDTDLDGWPNADLVCVENATYQCKKDNCP DLPNSGQEDYDKDGIGDACDNDDDDDGVPDDRDNCPLIFNPRQYDYDRDDVGDRCDNCPY NSNPDQTDTDNNGEGDACAVDIDGDGILNENDNCPYLYNVDQKDTDLDGVGDQCDNCPLE HNPDQLDSDSDRVGDKCDSNQDIDEDGHQNNMDNCPYIPNSNQADHDKDGKGDACDYDDD NDGIPDDKDNCRLVPNSDQLDSDGDGRGDACKDDFDQDNVLDIYDVCPENFDISETDFRK FQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTERD DDYAGFVFGYQSSSRFYVVMWKQITQTYWSSTPTKAQGYSGLSIKVVNSTTGPGEHLRNA LWHTGDTPGQVRTLWHDPKNVGWKDFTAYRWHLTHRPRTGHIRVVMYEGKKIMADSGRIY DKTYAGGRLGLFVFSQEMVYFSDLKYECRDV NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atgaagtcagctgcaatctttttgcttctgatgctgtggagctgcgagagcgcgagagtc gcagaaattcgagacgacaacagtgttttcgatctgtttgagctcgtccaagtgccgagg aaaaaccacggggtgactctggtgaaaggcgacgacccatacagccccgcctacaagatc ctgaaccccgacctgatccccccggtccccgagagcgccttcagggacctaatcgattcc attcacgcggagagaggatttctgttcctggtcaatttcaagcagttcaaacacaccagg ggaagccttttgaccgtggagaagaaagatggctccggacccgtattcgaaatcgtttcc aacgggaaagccaacactctggacatcgttttttccactgaaaacaagcaacaggtcgtg tccatcgaggaagcggatttggcggtgggacattggaaaaacatcacgcttttcgtgcag gacgacagggttcagttctatgtgggatgtgaggaggtgaatacagcggagctcgatgct tctatccagactatcctcactcaggagaccccaggcgtggcgagcctgaggattggcaag ggcgcagtgaaggacaggttcatgggggtgcttcaaaacgtgcgctttgtgttcggaact acacttgaagcaattctgaggaataaaggatgccataactcaattatgactgatatcatc acccttgacaatcccataaatggaaccagacctgcaatcaggactgattacactggccac aaaacaaaagatctgcagatgatttgtggcttttcatgcgaggacctagctgccatgttc aaggaactaaaaggtcttggtgtggtggtgaaagagctgtccaatgaactccgcaaagtg acagaagagaaaaacatgctcatgaatcgcattgacttttatgatggtgtctgtcttcac aatggaattgtgcacaaaaacaaggaagaatggacagtggatgattgcacagagtgcact tgccagaactctgcaacagtgtgccgcaagatttcatgtcccctaataccatgcgcaaat gccacagtgcctgatggggagtgctgccctcgatgtggaaccccgagcgactctgctgag gatggctggtccccctggtctgaatggacccattgttctgtgtcctgtggaaggggcatt cagcagcgtggccgctcctgtgaccgcatcaataacaactgtgagggcacgtcagtgcag acgagagactgctaccttcaggagtgtgacaagcgctttaagcaagatggcagctggagt cactggtcaccttggtcttcctgctcagtgacgtgtggtgctggcgttatcacacgcatc cgtctctgcaactccccaacacctcaaatggaaggcaaagattgccagggtgaaggtcgg caaactgagaggtgtgagaaatcagcatgtccgatcaatggtggctggggaccatggtca ccctgggatacttgctctgccacctgtggtggtggcgtccaaaaccgtaaacgtctttgc aataatcccgtacccatgtatggcggcaaagactgtgtgggagaagcaaaggccagccag cgttgcaacaaacaagcctgtccaattgatggatgcctttcaaatccatgctttgaagga gcccagtgtacaagcttcccagatggctcttggaaatgtggaaaatgccccacaggatat tctggcaatggaatcaactgcaaggatatcgatgagtgtaaggaggtccctgatgcctgc tttgaatttaatggagtccatagatgtgagaacaccgtgccaggctacaactgcctgccg tgcccctctcgctacaccggcccacagccgtttggtcgaggagtggaggacgctgcttcc aagaaacaggtgtgcacgcctcgcaatccctgcctcgatggaagccacgactgcaataag aatgctcgctgcaactacctgggccatttctcagaccccatgtaccgctgtgagtgcaaa cctggctttgctggaaatggacacatctgtggagaggacactgatcttgatggctggcct aatgctgatcttgtgtgtgtcgagaacgcaacctatcaatgcaagaaggacaactgcccc gatcttcccaattctgggcaagaggactatgacaaagatggaattggtgatgcttgtgat aatgatgacgacgacgatggcgttcctgatgacagggacaactgcccactcatcttcaac ccaagacagtatgactatgatcgcgatgacgtgggagaccgctgcgataactgtccatac aacagcaacccagaccagactgacactgacaacaatggtgaaggtgacgcctgcgctgtg gacattgatggagatggtattttgaatgagaacgacaactgcccatatctgtacaacgtc gaccagaaagacaccgatctcgatggagttggtgaccagtgtgacaactgccctctggaa cacaacccagaccagcttgactccgattctgaccgtgtcggagacaaatgtgacagcaac caggatatcgatgaggacggtcaccaaaacaacatggacaactgcccatacatccctaat tctaaccaggctgatcacgacaaggatgggaaaggagatgcttgcgactatgatgatgat aatgatggcatccctgatgacaaagacaactgcagattggttcccaattcagatcaactg gattctgatggcgatggacgtggtgatgcctgtaaagatgactttgaccaagacaatgtc ctagatatctatgatgtctgtccagagaactttgacatcagtgaaaccgacttccgtaaa ttccagatggttcctcttgatcccaagggcacttctcagatcgaccccaactgggtggtt cggcaccaaggaaaagaactggttcagacagtcaactgcgaccccggcattgctgttggt tttgatgagtttaattcagtcgacttcagcgggacattcttcatcaacacggagagggat gatgactacgccggcttcgttttcggataccagtccagctctcgcttctacgtggtcatg tggaagcagatcacacagacctactggtccagcacacctacgaaggcccagggttactca gggctgtcaatcaaagtggttaactccaccacagggccgggcgagcatctgaggaatgcc ctctggcacaccggagacactccaggacaggtgcgcacactgtggcacgacccaaagaat gtgggatggaaagacttcactgcttacagatggcacttgactcatagaccaagaactggg cacataagagtggtcatgtatgaaggcaaaaagatcatggcagattctggaagaatttat gacaaaacatacgcaggtggaagactgggtctctttgtcttctcacaagagatggtgtac ttctcagacctcaaatatgaatgcagagatgtgtaa

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