Carassius auratus (goldfish): 113063081 Help Entry 113063081         CDS       T07313                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism caua  Carassius auratus (goldfish) Pathway caua04115   p53 signaling pathway caua04145   Phagosome caua04148   Efferocytosis caua04350   TGF-beta signaling pathway caua04510   Focal adhesion caua04512   ECM-receptor interaction caua04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:caua00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     113063081   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     113063081  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     113063081    04148 Efferocytosis     113063081   09143 Cell growth and death    04115 p53 signaling pathway     113063081   09144 Cellular community - eukaryotes    04510 Focal adhesion     113063081   09142 Cell motility    04820 Cytoskeleton in muscle cells     113063081  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:caua04131]     113063081   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:caua00536]     113063081 Membrane trafficking [BR:caua04131]  Endocytosis   Phagocytosis    Opsonins     113063081 Glycosaminoglycan binding proteins [BR:caua00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    113063081 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS Laminin_G_3 TSP1_CCN cEGF EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  113063081 NCBI-ProteinID:  XP_026089036 Ensembl:  ENSCARG00000033190 UniProt:  A0A6P6LZS5 LinkDB All DBs Position 45:complement(7308956..7320102) Genome browser AA seq 1171 aa AA seqDB search MKSAAIFLLLMLWSCESARVAEIRDDNSVFDLFELVQVPRKNHGVTLVKGDDPYSPAYKI LNPDLIPPVPESAFRDLIDSIHAERGFLFLVNFKQFKHTRGSLLTVEKKDGSGPVFEIVS NGKANTLDIVFSTENKQQVVSIEEADLAVGHWKNITLFVQDDRVQFYVGCEEVNTAELDA SIQTILTQETPGVASLRIGKGAVKDRFMGVLQNVRFVFGTTLEAILRNKGCHNSIMTDII TLDNPINGTRPAIRTDYTGHKTKDLQMICGFSCEDLAAMFKELKGLGVVVKELSNELRKV TEEKNMLMNRIDFYDGVCLHNGIVHKNKEEWTVDDCTECTCQNSATVCRKISCPLIPCAN ATVPDGECCPRCGTPSDSAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQ TRDCYLQECDKRFKQDGSWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQMEGKDCQGEGR QTERCEKSACPINGGWGPWSPWDTCSATCGGGVQNRKRLCNNPVPMYGGKDCVGEAKASQ RCNKQACPIDGCLSNPCFEGAQCTSFPDGSWKCGKCPTGYSGNGINCKDIDECKEVPDAC FEFNGVHRCENTVPGYNCMPCPSRYTGPQPFGRGVEDAASKKQVCTPRNPCLDGSHDCNK NARCNYLGHFSDPMYRCECKPGFAGNGHICGEDTDLDGWPNADLVCVENATYQCKKDNCP DLPNSGQEDYDKDGIGDACDNDDDDDGVPDDRDNCPLIFNPRQYDYDRDDVGDRCDNCPY NSNPDQTDTDNNGEGDACAVDIDGDGILNENDNCPYLYNVDQKDTDLDGVGDQCDNCPLE HNPDQLDSDSDRVGDKCDSNQDIDEDGHQNNMDNCPYIPNSNQADHDKDGKGDACDYDDD NDGIPDDKDNCRLVPNSDQLDSDGDGRGDVCKDDFDQDNVLDIYDVCPENFDISETDFRK FQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTERD DDYAGFVFGYQSSSRFYVVMWKQITQTYWSSTPTKAQGYSGLSIKVVNSTTGPGEHLRNA LWHTGDTPGQVRTLWHDPKNVGWKDFTAYRWHLTHRPRTGHIRVVMYEGKKIMADSGRIY DKTYAGGRLGLFVFSQEMVYFSDLKYECRDV NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atgaagtcagctgcaatctttttgcttctgatgctgtggagctgcgagagcgcgagagtc gcagaaattcgagacgacaacagtgttttcgatctgtttgagctcgtccaagtgccgagg aaaaaccacggggtgactctggtgaaaggcgacgacccatacagccccgcctacaagatc ctgaaccccgacctgatccccccggtccccgagagcgccttcagggacctaatcgattcc attcacgcggagagaggatttctgttcctggtcaatttcaagcagttcaaacacaccagg ggaagccttttgaccgtggagaagaaagatggctccggacccgtattcgaaatcgtttcc aacgggaaagccaacactctggacatcgttttttccactgaaaacaagcaacaggtcgtg tccatcgaggaagcggatttggcggtgggacattggaaaaacatcacgcttttcgtgcag gacgacagggttcagttctatgtgggatgtgaggaggtgaatacagcggagctcgatgct tctatccagactatcctcactcaggagaccccaggcgtggcgagcctgaggattggcaag ggcgcagtgaaggacaggttcatgggggtgcttcaaaacgtgcgctttgtgttcggaact acacttgaagcaattctgaggaataaaggatgccataactcaattatgactgatatcatc acccttgacaatcccataaatggaaccagacctgcaatcaggactgattacactggccac aaaacaaaagatctgcagatgatttgtggcttttcatgcgaggacctagctgccatgttc aaggaactaaaaggtcttggtgtggtggtgaaagagctgtccaatgaactccgcaaagtg acagaagagaaaaacatgctcatgaatcgcattgacttttatgatggtgtctgtcttcac aatggaattgtgcacaaaaacaaggaagaatggacagtggatgattgcacagagtgcact tgccagaactctgcaacagtgtgccgcaagatttcatgtcccctaataccatgcgcaaat gccacagtgcctgatggggagtgctgccctcgatgtggaaccccgagcgactccgctgag gatggctggtccccctggtctgaatggacccattgttctgtgtcctgtggaaggggcatt cagcagcgtggccgctcctgtgaccgcatcaataacaactgtgagggcacgtcagtgcag acgagagactgctaccttcaggagtgtgacaagcgctttaagcaagatggcagctggagt cactggtcaccttggtcttcctgctcagtgacgtgtggtgctggcgttatcacacgcatc cgtctctgcaactccccaacacctcaaatggaaggcaaagattgccagggtgaaggtcgg caaactgagaggtgtgagaaatcagcatgtccgatcaatggtggctggggaccatggtca ccctgggatacttgctctgccacctgtggtggtggcgtccaaaaccgtaaacgtctttgc aataatcccgtacccatgtatggcggcaaagactgtgtgggagaagcaaaggccagccag cgttgcaacaaacaagcctgtccaattgatggatgcctttcaaatccatgctttgaagga gcccagtgtacaagcttcccagatggctcttggaaatgtggaaaatgccccacaggatat tctggcaatggaatcaactgcaaggatatcgatgagtgtaaggaggtccctgatgcctgc tttgaatttaatggagtccatagatgtgagaacaccgtgccaggctacaactgcatgccg tgcccctctcgctacaccggcccacagccgtttggtcgaggagtggaggacgctgcttcc aagaaacaggtgtgcacgcctcgcaatccctgcctcgatggaagccacgactgcaataag aacgctcgctgcaactacctgggccatttctcagaccccatgtaccgctgtgagtgcaaa cctggctttgctggaaatggacacatctgtggagaggacactgatcttgatggctggcct aatgctgatcttgtgtgtgtcgagaacgcaacctatcaatgcaagaaggacaactgcccc gatcttcccaattctgggcaagaggactatgacaaagatggaattggtgatgcttgtgat aatgatgacgacgacgatggcgttcctgatgacagggacaactgcccactcatcttcaac ccaagacagtatgactatgatcgcgatgacgtgggagaccgctgcgataactgtccatac aacagcaacccagaccagactgacactgacaacaatggtgaaggtgacgcctgtgctgtg gacattgatggagatggtattttgaatgagaacgacaactgcccatatctgtacaacgtc gaccagaaagacaccgatctcgatggagttggtgaccagtgtgacaactgccctctggaa cacaacccagaccagcttgactccgattctgaccgtgtcggagacaaatgtgacagcaac caggatatcgatgaggacggtcaccaaaacaacatggacaactgcccatacatccctaat tctaaccaggctgatcacgacaaggatgggaaaggagatgcttgcgactatgatgatgat aatgatggcatccctgatgacaaagacaactgcagattggttcccaattcagatcaactg gattctgatggcgatggacgtggtgatgtctgtaaagatgactttgaccaagacaatgtc ctagatatctatgatgtctgtccagagaactttgacatcagtgaaaccgacttccgtaaa ttccagatggttcctcttgatcccaagggcacttctcagatcgaccccaactgggtggtt cggcaccaaggaaaagaactggttcagacagtcaactgcgaccccggcattgctgttggt tttgatgagtttaattcagtcgacttcagcgggacattcttcatcaacacggagagggat gatgactacgccggcttcgttttcggataccagtccagctctcgcttctacgtggtcatg tggaagcagatcacacagacctactggtccagcacacctacgaaggcccagggttactca gggctgtcaatcaaagtggttaactccaccacagggccgggcgagcatctgaggaatgcc ctctggcacaccggagacactccaggacaggtgcgcacactgtggcatgacccaaagaat gtgggatggaaagacttcactgcttacagatggcacttgactcatagaccaagaactggg cacataagagtggtcatgtatgaaggtaaaaagatcatggcagattctggaagaatttat gacaaaacatacgcaggtggaagactgggtctctttgtcttctcacaagagatggtgtac ttctcagacctcaaatatgaatgcagagatgtgtaa

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