KEGG   Carassius auratus (goldfish): 113067420
Entry
113067420         CDS       T07313                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DP beta 1 chain-like
  KO
K06752  MHC class II antigen
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04145  Phagosome
caua04514  Cell adhesion molecules
caua04672  Intestinal immune network for IgA production
caua05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:caua00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    113067420
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    113067420
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    113067420
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    113067420
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:caua04147]
    113067420
Exosome [BR:caua04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113067420
  Exosomal proteins of epithelial cells
   113067420
  Exosomal proteins of breast milk
   113067420
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 DUF1687 MurT_C C2-set_3 Ig_3
Other DBs
NCBI-GeneID: 113067420
NCBI-ProteinID: XP_026095614
Ensembl: ENSCARG00000021771
UniProt: A0A6P6MGJ6
LinkDB
Position
4:5163050..5164746
AA seq 231 aa
MMLLFFSPDGYHVSILFQCTYISLDLSDVELIISTSFNKAVQMQFNSTLGKYIGFTEIGM
KLAHLSSNNNKILSHLNNLLHKCKHYGEIGYPAIVNKLVQPKIKLRSVKQVGGRNPAALV
CSAFDFYPDQIKVSWLIDGKEMTTDAASIEEMANGDWYYQIHSHLEYTAKSGEKISCMVE
HGTFNKPVIIDWDPSISETDRNKISIGAFGLVLGVITAAAGFMYYKKKSAD
NT seq 696 nt   +upstreamnt  +downstreamnt
atgatgttgttgtttttttcaccagatggttatcacgtctctatactgtttcagtgcacc
tatatttcccttgatcttagtgacgtggaactcattatttcaacttcctttaataaagct
gttcaaatgcaattcaacagcactcttggaaagtatatagggtttactgagatcggaatg
aagttggcacacttgtcgagcaacaataacaaaatcttgtcacatttaaacaacttgctg
cacaaatgtaaacattatggagaaattggttacccagccattgttaataaattggtgcaa
cccaagatcaagcttaggtcagtgaaacaggttggcggcagaaatcctgctgcattggtg
tgcagtgcattcgacttctaccctgaccagatcaaagtttcctggctgatcgacggtaaa
gagatgaccactgatgcggcgtccatcgaggagatggctaatggggactggtactatcag
attcactcccaccttgaatatacagccaaatctggagagaagatctcctgtatggtggag
catggtaccttcaataaacccgtgatcatcgactgggatccctctatctcggagactgac
aggaataaaatctctattggagcctttggtttggtgctgggagtcatcacagcagctgct
ggattcatgtactacaagaaaaaatcagcagactga

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