KEGG   Carassius auratus (goldfish): 113068008
Entry
113068008         CDS       T07313                                 
Name
(RefSeq) TNF receptor-associated factor 2-like
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04010  MAPK signaling pathway
caua04137  Mitophagy - animal
caua04141  Protein processing in endoplasmic reticulum
caua04210  Apoptosis
caua04217  Necroptosis
caua04621  NOD-like receptor signaling pathway
caua04622  RIG-I-like receptor signaling pathway
caua04920  Adipocytokine signaling pathway
caua05132  Salmonella infection
caua05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    113068008
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    113068008
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    113068008
  09143 Cell growth and death
   04210 Apoptosis
    113068008
   04217 Necroptosis
    113068008
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    113068008
   04622 RIG-I-like receptor signaling pathway
    113068008
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    113068008
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    113068008
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    113068008
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caua03019]
    113068008
   04121 Ubiquitin system [BR:caua04121]
    113068008
Enzymes [BR:caua01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     113068008
Messenger RNA biogenesis [BR:caua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     113068008
Ubiquitin system [BR:caua04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    113068008
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 ATG16 zf-C3HC4_2 zf-C3HC4_4 Sina_ZnF zf-RING_6
Other DBs
NCBI-GeneID: 113068008
NCBI-ProteinID: XP_026096338
Ensembl: ENSCARG00000050904
UniProt: A0A6P6MIV3
LinkDB
Position
LG30F:complement(1870394..1881295)
AA seq 583 aa
MAAQEPSPPTSMENNKPGFPKKILANKLEDKHLCNCCQNILRRPFQAQCGHRFCFYCFNR
TVGSGPQKCNACIKEDIFEEPTSILIQGCAFPDNAARREVENLPAVCFNEGCSWKGSIKD
YELSHEGKCEFMILPCPLCKELIRLNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRYHVVGCDLSVEKEKIHDHERACA
HEHLNLLLHYIMGMKVSLEGLQPQSLELAGHKAHELHQALRDLETRVSQLSAIPGPTGPP
VQGVPSSSSSSSSSSAPPTTLPTSFTPLPSSVGAALELQLHSEKTKVADLGRRCQELEVK
AGTFEDVVCVLNREVERFATTMEASNRQHRLDQDKIEALSNKVRQLERQVGVKDLTVAEM
EGRLREMSATTFDGVFIWRISDFTKKRQDAIAGRAPAMFSPAFYTSKYGYKMCLRIYLNG
DGTGRGTHLSLFFVVMRGTSDALLKWPFNQKVTLMLLDQSNREHIIDAFRPDITSSSFQR
PVSDMNIASGCPLFCPLSKLEGKNSYIRDDTIFIKAIVDLTGL
NT seq 1752 nt   +upstreamnt  +downstreamnt
atggcggctcaagaaccctcccccccgacctccatggagaacaataagcctgggttccca
aagaagattctggccaacaaacttgaagacaaacatttatgcaactgctgtcagaacatt
ttgagaagaccgttccaagcgcagtgcggtcatcgcttttgtttttactgcttcaaccgg
actgttgggtctggaccgcagaaatgcaatgcctgtatcaaggaggacatcttcgaagag
cccacgtcgatcctcatacaaggatgtgcgtttcccgacaatgctgccagaagagaagtt
gaaaatcttccagctgtgtgcttcaacgaaggctgctcctggaaaggcagtattaaagat
tatgagttgagccatgaggggaagtgtgagttcatgattctgccgtgtcctttgtgcaaa
gagctgattagactgaacgaacaggagcgtcataatgaacgcgagtgtcctgagagaacg
ctcaactgcaagtactgcaaagagccatttcacttcaaaaacatcaaggcccatgatgag
atctgtcccaaatatcctatgatttgtgaaggatgtgcgaagaagaaaatccccagagaa
aagtatgttgaccacatcaagttctgcagcaagttcaggactccgtgcagatatcatgtg
gttggctgcgacttgtcagtggagaaggagaagatccacgatcacgagcgtgcctgtgct
cacgaacatctcaacctgctgttgcactacatcatgggcatgaaggtcagtctggagggt
ctgcagccccaaagcctggagctggccggtcacaaagcacacgagcttcaccaggcgctc
cgagacctggagaccagagtcagtcagctgagcgccatccccggcccgaccggacctccc
gtgcagggggtcccctcctcttcatcctcatcctcgtcctcctctgcgcctccaaccacg
ctgcccacctccttcacccctctgcccagctcggtgggtgcagcgctggagctccagctg
cacagcgagaagaccaaggtggcagatctgggccgtcgctgccaggagctggaggtgaag
gcggggacatttgaagacgtggtctgcgtgctaaaccgagaagtggagcgcttcgcaacc
accatggaggccagcaaccgccaacacagactcgatcaggacaaaatcgaggccctaagc
aacaaggttcgtcagctggagcggcaggtgggcgttaaagacctgactgtggctgaaatg
gagggcagattgcgggagatgtctgccaccacgtttgatggcgtcttcatctggcggata
tcagatttcactaaaaagagacaagatgccattgctggacgggcgcctgccatgttttca
cccgcattttacacaagcaagtatggatataagatgtgcctgcggatttacctgaacggg
gacgggacgggtcgtgggacgcatctctcgctgttttttgtggtgatgagaggaacgagt
gacgcactgctcaaatggcccttcaatcagaaggtgacgctgatgctgctggatcagagt
aacagagagcacatcatcgacgcgttccgtcccgacatcacttcctcctcgttccagagg
cctgtaagcgatatgaacatcgccagcggctgcccgctcttctgcccgctgtccaagctg
gagggcaagaactcatacatacgcgacgacaccatcttcatcaaagccatcgtggacctc
actggcctttag

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