KEGG   Carassius auratus (goldfish): 113069569
Entry
113069569         CDS       T07313                                 
Name
(RefSeq) lysine-specific demethylase 2A-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    113069569
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:caua03000]
    113069569
   04121 Ubiquitin system [BR:caua04121]
    113069569
   03036 Chromosome and associated proteins [BR:caua03036]
    113069569
Enzymes [BR:caua01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     113069569
Transcription factors [BR:caua03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    113069569
Ubiquitin system [BR:caua04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     113069569
Chromosome and associated proteins [BR:caua03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    113069569
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     113069569
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD JmjC LRR_6 Cupin_8 F-box PHD LRR_4 Rubredoxin
Other DBs
NCBI-GeneID: 113069569
NCBI-ProteinID: XP_026098508
Ensembl: ENSCARG00000038595
UniProt: A0A6P6MQ17
LinkDB
Position
Unknown
AA seq 1266 aa
MEEGSSRYSKRLRTGTRRRYQDDSISDDEIEGKRTFDVDEKLQSDRYNSDLVKIMDGKDF
TLEYIQREGLRDPIIFQKADGLGIKMPDPDFSVSDVKLFVGSRRMVDVMDVTTQKGIEMS
MGQWRRYYETPPSEREKLYNVISLEFSHTKLEHLVKRPTSVDMIDWVDNMWPRHLKESQR
DSTNAITDMQYPKVQKYCLMSVEGCFTDFHIDFGGTSVWYHILRGRKVFWLIPPTPQNLE
LYENWVLSGKQGDIFLGDKATMCQRIELKQGYTFMIPSGWIHAVYTPMDTLVFGGNFLHS
FNIPMQLHIYSIEDRTRVPAKFRYPFYFEMCWYVLERYLYCMTNTSHLTPEFQKHSLGIG
LTKEDVIKQGGLNSDAGSVEKEEESEEEAASPARPGVKVHLTPFELQGLWELLHKLEELP
AHKKCVPSGIRNAPALLGDIRKLLEEHANDNPKLSYTGKPIVKWPKRPSWYEPPPPLSLL
YRPRAPGSAPVLPPAPRPVKPSSSISALRRRRVRCKRCEACLRTECGDCNYCRDMRKFGG
PGRLKKSCVLRQCLAPALPLTAVCAICKEGYQESEDSESVQTLMECSECAQITHPECIKV
PGEGIINKDLPSCWECPKCVQGKKIESSSSSEEETDSSVSNSSHLSGPPAKRAYREGIGV
GGLRIGRRGRPPLSPSSLPLTRSRRQPPPSQRLLLQHQQNRRRAGALELQLRKRIKLERN
KILQSTRSSVSLSPKLLRQRSLERGGVVRAGPGRSVSRGRGTSSCRGRGVRLRGGGRGGG
LRERMEIEVERDDSVEEEPEERKENGPYNGKENRPQRRGGKAAEDENGDGHQNGESEGSS
EGGEPTPSDSSVVLSDDVRGQGSCITVTLQPSRGKRDPSAIVPKLEANLSSRSLPQNHKA
LLRPPLRNGAPRSDGSHSPADRLHVNRSHALSSSPHTLTRSASKHMVRRLRSNFKDSPHR
LTRERIGKKARSRSEKTKHSDSCPSSTLRPPAEPNGGNEPGWEREVWVSVFHYLTRAELC
VCMAVCKSWYKWGCDKRLWMRITLSRCRSISPQALTGIIKRQPATLDLSWANISKKQLSW
LINRLPGLKDLVLSGCNWASVSALSSPSCPLLRSLDLSWADGVKDAQIRELLNPPGSDNR
SQMKHMQCLWLCGLEVTEATLRLIIRHMPLLTRLELSHCPITDGALNLLSAVGSSTRNTL
THLNLAGCSRLTDRCLVYLRRLSCLSVLDLRGCKGVSRQACESFISELSVNALYCLSDDK
LIQRIS
NT seq 3801 nt   +upstreamnt  +downstreamnt
atggaagaggggagttcccgttatagcaaacgcctgcggactggcacgcggcggcgttac
caagatgacagcatttcagatgatgaaatcgaagggaagcggacctttgatgttgacgag
aaactccaaagtgatcgatacaactcagatctggtcaaaattatggatgggaaagacttc
accttggagtacatccaacgggagggactccgggaccccattatcttccaaaaagcggat
ggtcttggcataaagatgcctgacccagactttagcgtcagtgacgtgaaattgtttgtg
ggcagtcgcaggatggtggatgtgatggatgtgaccactcaaaaaggcatcgagatgtca
atggggcagtggaggagatactacgagacgccgccttctgaacgtgaaaagctgtacaat
gtgatcagcctggagttcagtcacacaaaactagagcatctggtcaagagacctacctcg
gttgatatgattgactgggtggacaacatgtggccacggcatcttaaagagagtcagaga
gactccaccaatgccattacagacatgcagtaccctaaagtacagaagtattgtctgatg
agtgtcgagggatgcttcacagatttccacatagactttggtggcacgtcagtctggtat
catatcctcaggggaagaaaggtgttctggctgatcccgcccacccctcagaacctggag
ctctatgagaactgggtgttgtcagggaagcagggggacatctttctcggcgataaagcc
acaatgtgccaacggattgaactgaagcaaggctacacattcatgatcccctcagggtgg
attcatgcggtttacactccaatggatacgctggtgtttgggggaaactttttgcacagc
tttaacattcccatgcagctccacatctacagcattgaggaccgcacacgggtccctgct
aagttccgctaccctttctactttgagatgtgctggtatgtgttggagcgttacttgtac
tgtatgaccaacacgtctcacctcacaccggagttccagaagcactcactgggcattggg
ctgacgaaggaggacgtgattaaacaaggaggattgaatagtgatgcgggaagtgtagag
aaagaggaggagtctgaggaagaggcagcatctccggctcgcccaggggttaaagttcac
ctgacaccctttgagctccaagggctttgggaattactgcacaagttggaggagttgcca
gcacacaagaaatgcgtcccatcaggcatcagaaacgccccagcactgctcggtgacata
cggaagctgctagaggaacatgccaatgataaccccaagttgtcttacactggaaaacca
attgttaaatggccaaaaaggccctcgtggtatgagccgcctccgcctctgtctctgctg
taccgcccgcgcgctcccggttcagcccccgtgctgccgccggctcctcgtcccgtgaag
ccgtcttcctccatctccgctctgagacgcagacgcgtgcgctgcaaacgctgcgaggcc
tgtctgcgcaccgagtgcggcgactgtaactactgtcgggacatgaggaagttcggagga
ccgggcagactcaagaagagctgtgttctccgtcagtgtcttgcaccggcgctacctctt
actgcagtgtgtgccatatgtaaggaaggctatcaagagtctgaagactccgagtccgtc
caaacgctcatggagtgctccgaatgcgctcagatcactcatccagaatgtataaaggtg
cccggtgagggtattattaataaggaccttcccagttgttgggagtgtccgaaatgtgtc
cagggcaagaaaatagagtcttccagcagtagtgaggaagagacagacagcagcgtgtcc
aacagcagtcacctgtctggtcctccggctaagcgcgcgtacagagaagggattggggtg
gggggtctgcgtatagggcgcagaggtcgcccgcccctctccccctcctccctgcctctg
acccgctccagacggcagccgcccccatcccagagactcctgctgcagcaccagcagaac
aggaggagagcaggagcgctggagctacagctcaggaaaaggataaaattagaaaggaac
aaaatcctccagtcgacccgttcgtctgtctctctttctccaaagctcctgcgtcagcgg
agtctggagagagggggcgtagtcagagcgggacccggacggagcgtttcgcgtggccga
gggacgtcctcctgtcggggaagaggagtacgactccggggcggtggccgagggggaggc
ctgagagaaagaatggagatagaggttgaaagagatgactccgtggaagaagaaccggag
gagaggaaagagaatggaccgtataatggtaaagagaaccgtcctcagagacgaggggga
aaagccgctgaagatgagaacggagacggtcaccaaaatggagagagcgaggggagcagt
gagggaggagagcccaccccatcggactcatctgtggtgctaagtgatgatgtcagaggc
caggggtcctgcatcacggtgacgttacagccatcgaggggtaagcgtgacccaagcgcc
attgttcccaaactggaagccaacttgtcttctagaagccttcctcaaaaccacaaagcc
ctgctccgtcccccactccgaaacggcgcccctcgctcagacggttctcattcgcctgcg
gacagactgcatgtaaacagatcacatgctctttcgtcatcaccgcacactctgacaaga
agtgcatccaaacacatggtgaggagactgagatcaaacttcaaagattcccctcaccgg
ctgacgagagagaggattgggaaaaaggcccgatcccgatcggaaaagacgaagcactcc
gactcttgtcccagttccaccttgcgccccccagcggagccgaacggagggaacgagccc
ggctgggagagagaggtgtgggtgtccgtgttccactacttgactcgtgccgagctgtgc
gtctgcatggctgtttgtaagagttggtacaaatggggctgtgacaagcgtttatggatg
cgcatcactctgagccgctgccgctctataagtccacaggccctcacaggcatcatcaaa
cggcagcctgccacactggacctctcttgggccaacatctccaagaagcagctcagctgg
ctcatcaaccgcctgccaggccttaaagatctggtgctatcagggtgcaactgggcgtca
gtctctgcgctgagctctccaagctgtcctttactgcgctctttagacctgagctgggcc
gatggagtcaaagatgcacaaatcagggagctgctcaacccaccaggcagcgacaaccgt
tcccagatgaagcacatgcagtgcttgtggctgtgcggtctggaggtgaccgaagccacg
ctgaggctcatcatcagacacatgcctctgctcactcgcctcgagctctcgcattgtccc
atcacagacggtgctctcaacctcctcagcgccgtgggctcctccacacgcaacacactc
acacacctcaacttagcaggttgtagccgcctgacagaccggtgtctggtgtacctgcgg
cgcctgtcctgcctctccgtactggacctgcgcggctgcaaaggggtctcgcgacaggcg
tgcgaaagctttatctccgagctgtctgtcaatgccctctactgcctgtcagatgacaaa
ctcatccagaggatatcataa

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