KEGG   Carassius auratus (goldfish): 113073269
Entry
113073269         CDS       T07313                                 
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04010  MAPK signaling pathway
caua04137  Mitophagy - animal
caua04141  Protein processing in endoplasmic reticulum
caua04210  Apoptosis
caua04217  Necroptosis
caua04621  NOD-like receptor signaling pathway
caua04622  RIG-I-like receptor signaling pathway
caua04920  Adipocytokine signaling pathway
caua05132  Salmonella infection
caua05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    113073269
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    113073269
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    113073269
  09143 Cell growth and death
   04210 Apoptosis
    113073269
   04217 Necroptosis
    113073269
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    113073269
   04622 RIG-I-like receptor signaling pathway
    113073269
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    113073269
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    113073269
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    113073269
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caua03019]
    113073269
   04121 Ubiquitin system [BR:caua04121]
    113073269
Enzymes [BR:caua01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     113073269
Messenger RNA biogenesis [BR:caua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     113073269
Ubiquitin system [BR:caua04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    113073269
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-C3HC4_2 zf-RING_6 ATG16 zf-C3HC4_4 Lar_restr_allev Sina_ZnF Dynamitin
Other DBs
NCBI-GeneID: 113073269
NCBI-ProteinID: XP_026101946
Ensembl: ENSCARG00000001854
UniProt: A0A6P6N0U9
LinkDB
Position
5:complement(7882138..7899206)
AA seq 604 aa
MAAQEPSPPSSIENNKPGFPKKILAIKLEDKHLCNCCQNILRRPFQAQCGHRFCSYCFNR
TVGSGPQKCNACIKEDIFEEPTSILKPGCAFPDNAARREVENLPAVCFNEGCSWKGSIKD
YELSHEGKCEFMILPCPLCKELIRLNEQERHNERECPERTLNCKYCKEPFHFKNIKVSER
SDKSAIHLKEEKGISCYKIMFSQAHDEICPKYPMICEGCAKKKIPREKYVDHIKFCSKFR
TPCRYHVVGCDISVEKEKIHDHERVCAHEHLNLLLHYIMSMKVCLEGLQPQSLELAGHKA
QELHQALRDLETRVSQLNGPPVQGVPSSSSSSSSSSALPTTLPTSFTPLPSSVGAALELQ
LHSEKTKVADLGRRCQELEVKAGTFEDVVCVLNREVERFATTMEASNRQHRLDQDKIEAL
SNKVRQLERQVGVKDLTVAEMEGRLREMSATTFDGVFIWRIADFTKKRQDAIAGRAPAMF
SPAFYTSKYGYRMCLRIYLNGDGTGRGTHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQ
SNREHIIDAFRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLEGKNSYIRDDTIFIKVIVD
LTGL
NT seq 1815 nt   +upstreamnt  +downstreamnt
atggctgctcaagaaccctcccccccgtcctccatagagaacaacaagcccgggttccca
aagaagattctggccatcaaacttgaagacaaacatttatgcaactgctgtcagaacatt
ttgaggagaccgttccaagcgcagtgcggccatcgcttttgttcttactgcttcaaccgg
actgttggatcaggaccacagaaatgtaatgcctgtatcaaggaggacatcttcgaagag
cccacgtccatcctcaaaccaggctgcgcgtttcccgacaatgctgccagaagagaagtt
gaaaatcttccagctgtttgcttcaacgaaggctgctcctggaaaggcagtattaaagat
tatgagttgagccatgaagggaagtgtgagttcatgattctgccgtgtcccttgtgcaaa
gagctcattagactgaacgaacaggagcgtcataatgaacgcgagtgtcctgagagaacg
ctcaactgcaagtactgtaaagaaccatttcatttcaaaaacatcaaggtaagcgagcgg
tctgacaaaagcgccatacatttgaaggaggaaaaaggcatttcatgttacaaaataatg
ttttcacaggcccatgatgagatctgccccaaatatcctatgatttgtgaaggatgtgcg
aagaagaaaatccccagggaaaagtatgttgaccacatcaagttctgcagcaagttcagg
actccatgcagatatcatgtggttggctgcgacatttcagtggagaaggagaagatccac
gatcacgagcgtgtctgtgctcacgaacatctcaacctgctgttgcactacatcatgagc
atgaaggtctgtctggagggtctgcagccccaaagcctggagctggccggtcacaaagca
caagagcttcaccaggcgctccgagacctagagaccagagtcagtcagctgaacggaccg
cccgtgcagggggtcccctcctcttcatcctcatcctcgtcctcctctgcgcttccgacc
acgctgcccacctccttcacccctctgcccagctcggtgggcgcagcgctggagctccag
ctgcacagcgagaagaccaaggtggcagatctgggccgtcgctgccaggagctggaggtg
aaggcggggacgtttgaagacgtggtctgcgtgctaaaccgagaagtggagcgcttcgca
accaccatggaggccagcaaccgccaacacagactcgatcaggacaaaatcgaggctctt
agtaacaaggtgcgtcagctggagcggcaggtgggtgttaaagacctgactgtggctgaa
atggagggcagattgcgggagatgtctgccaccacgtttgacggcgtcttcatctggcgg
atagcagatttcactaaaaagagacaagatgccattgctggacgggcgcctgccatgttt
tcacccgcattttacacaagcaagtacggctacaggatgtgcctgcggatttacctgaac
ggcgacgggacgggacggggaacgcatctctcgctgttttttgtggtcatgagagggttg
agtgatgcgctgctcaaatggcccttcaaccagaaggtcacactgatgctgctggaccag
agtaacagagagcacatcatcgatgctttccgtcccgatgtcacttcctcctcgttccag
aggcctgtaagcgagatgaacatcgccagcggctgcccgctcttctgtccactgtccaag
ctggagggcaagaactcatacatacgtgacgacaccatcttcatcaaagtcatcgtggac
ctcactggcctttaa

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