Carassius auratus (goldfish): 113078090
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Entry
113078090 CDS
T07313
Name
(RefSeq) guanine nucleotide exchange protein smcr8a-like
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113078090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113078090
Membrane trafficking [BR:
caua04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
113078090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
ERM_helical
VPS11_N
Motif
Other DBs
NCBI-GeneID:
113078090
NCBI-ProteinID:
XP_026106170
Ensembl:
ENSCARG00000054542
UniProt:
A0A6P6NAC4
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MIGSPDVVAFTKEDDFGDSFTDPYSLPEEFTVPLFAHAASANPWTKTSYAKFAKDFILVS
EFSEQVGPQPLLTIPNDPKVCGTFDLNYFSLRIMSVDYQASFVGHPPGSNYPKLNFVEDS
KVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADERKIMHQFQELSSEFSKASE
FLKSGNRKAFANELEKKLRDLEYTRSVLHKEAELQKKNNGCYSTQAIDKANELANMEKSI
YEHRDLLRQITSYPSRKKKDGDFVQHETEKPAETSVIDDSLNSNHSEVADKTVETECESR
KSSYTPQLIKAKSAKCFDKRLKTMEELCNASFFHQTLEQLNTIEKSYRGDLCLIYTSQID
RALLSKQRITSFLFEAECDSEFGGTSKNFSVSSNNPTVPILNFSGEPQSLDSYTTCIDVD
HIKPGVESMEGRPDSSTSDITQETSEAADTETKGSFSSDKSIEAFGGVSPSSLQTNYFDG
LERKSKVSIASPSENESSSLAVPQRTSDGNLVPVDPTCCIGQDGFVFEEPLLELAQECYG
DTVVNREPLSLLQGDPALQMDYILEESALAESPNMGLTFSELNTEEVAKITIEDVSDSTS
FMSTSTSSDRAVSPFTYGNAATLKQKKKAGHSALRFIRQYPFAQQAISCLLSGRTLVILG
VDEGTVRKLVNALFIFIPNLGKYGETVQPWLSSPFQLTDLQRWKLIGLQRAASPAGSSIL
HSLNRYSRYISILDCDSKTLRCPPYKGTLVSHLADHRTQIKRGSTYFLHVQGMLTQLTAK
AFLYTFCHHIHLPMDINHQGLVTSRRTNFLLQLGYTVEESKIVQYLSELIKRHYIQGSSK
GANQSFCFNYTTSYLYKI
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgattggctcgccagatgtggtggcttttaccaaagaagatgactttggggactctttc
acggacccgtactcacttccagaggagtttactgtgcctttgtttgctcacgctgccagt
gcaaatccctggacgaagacatcctatgcaaaattcgcaaaagatttcatactcgtctct
gaattttcggaacaggtcggtccacagcctttactcaccattcccaatgaccccaaggtg
tgtgggacatttgaccttaactacttctcccttcgcatcatgtctgtggactaccaggcg
tccttcgttgggcatcctcccggcagtaactacccaaagctcaattttgtggaggactca
aaagttgtcctgggtgattccaaggaaggggcgttcgcttacgtccatcatctgacgctg
tacgatttggaggctcgcggatttgtgcgccccttctgcatggcctacatttccgcggac
gagaggaagatcatgcatcagtttcaagaactgtcatctgagttttccaaggcttccgaa
tttttaaaatcaggcaacaggaaggcttttgcaaacgagctggaaaagaaactgagagac
ctggagtacaccagatcggtgctgcacaaagaggctgaactacagaaaaagaacaatggc
tgttattccacacaagctattgacaaggcgaatgaattggccaatatggagaagtccatc
tatgaacacagagatctgctgaggcaaatcacatcttatccttccaggaaaaagaaagat
ggggattttgtacaacacgagaccgagaaaccggctgagacgagtgtaatagacgattca
ctaaacagtaatcattctgaggttgcagataagactgtggaaactgaatgcgagagtaga
aagtcctcttacacgcctcagctcataaaggccaaatctgcaaaatgctttgataaacgc
ttgaaaacgatggaagagctctgcaacgccagctttttccaccaaactctagagcaacta
aacacaattgagaagtcataccgaggagatctgtgccttatttacactagccagatcgac
agggcccttctgagcaaacagagaattactagtttcctcttcgaagctgaatgcgactcg
gagttcggaggaacctcaaagaacttcagtgtttcttccaacaatccaactgtccctata
ctgaacttctctggcgagccgcagagtctcgactcgtacaccacctgcatagatgtagat
cacattaagcccggtgtggagtctatggaagggcgtcccgactccagtacatctgacatt
acgcaggaaacctcagaggctgctgacacggagaccaaagggagttttagtagcgacaag
agcatcgaggcttttggaggtgtcagtccttctagtctacagacaaattactttgatggc
ctggaacgaaagagcaaggtgtccattgcatcaccatctgaaaacgaatccagctctctt
gctgtcccacaaaggacgtctgacgggaatctagtcccggtggatcccacctgctgtatt
ggacaggacggtttcgtttttgaggaacctttacttgagcttgcacaggagtgctatggc
gacaccgtggtgaaccgagaacctctgtctcttcttcagggagaccctgccttacagatg
gactacattttggaagagtcagccctcgcagaaagcccaaacatgggactgactttttct
gaactgaacactgaggaggtggcaaaaattacaatcgaagatgtctccgatagtacaagc
ttcatgagcacctccacaagttctgaccgtgctgtgtctccgttcacctacggcaatgcg
gcgacgctgaagcagaagaagaaagctggtcacagcgctcttcgattcatcaggcaatat
ccgtttgcgcagcaagccatttcctgccttctgagtggccggacgcttgttattttaggg
gtggacgagggcacggtgaggaagctagtcaatgctttgttcattttcattcccaatctc
ggcaagtacggtgaaaccgtccaaccatggctttcatcgccatttcagctcaccgacctg
cagagatggaaactcattggattgcagagagctgcctccccggctggatccagcattctc
cattctctgaatcgatacagccgttacataagcattttggactgtgacagcaagaccctc
cggtgtccgccatacaaaggaacactagtaagccatttggcagaccacaggactcagatc
aaacgtggcagtacctacttcctccatgttcagggtatgttgactcagctcacagccaag
gccttcctttacacattctgccatcacattcaccttcccatggacatcaaccaccagggc
ttggtaacatcacgcaggactaacttcttgttgcagctcggctacactgtggaggagagc
aaaatcgtccagtacctgagtgagctcatcaagcggcattacattcaggggtcctcgaag
ggggccaaccagtctttttgttttaattacaccaccagctatttgtacaaaatctga
DBGET
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