KEGG   Carassius auratus (goldfish): 113083521
Entry
113083521         CDS       T07313                                 
Symbol
traf2
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04010  MAPK signaling pathway
caua04137  Mitophagy - animal
caua04141  Protein processing in endoplasmic reticulum
caua04210  Apoptosis
caua04217  Necroptosis
caua04621  NOD-like receptor signaling pathway
caua04622  RIG-I-like receptor signaling pathway
caua04920  Adipocytokine signaling pathway
caua05132  Salmonella infection
caua05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    113083521 (traf2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    113083521 (traf2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    113083521 (traf2)
  09143 Cell growth and death
   04210 Apoptosis
    113083521 (traf2)
   04217 Necroptosis
    113083521 (traf2)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    113083521 (traf2)
   04622 RIG-I-like receptor signaling pathway
    113083521 (traf2)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    113083521 (traf2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    113083521 (traf2)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    113083521 (traf2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caua03019]
    113083521 (traf2)
   04121 Ubiquitin system [BR:caua04121]
    113083521 (traf2)
Enzymes [BR:caua01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     113083521 (traf2)
Messenger RNA biogenesis [BR:caua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     113083521 (traf2)
Ubiquitin system [BR:caua04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    113083521 (traf2)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_2 Paramyxo_NS_C zf-RING_6 zf-C3HC4_4 zf-RING_5 TRAFD1-XIAF1_ZnF ADIP
Other DBs
NCBI-GeneID: 113083521
NCBI-ProteinID: XP_026110350
Ensembl: ENSCARG00000021838
UniProt: A0A6P6NMR6
LinkDB
Position
5:25356651..25382929
AA seq 536 aa
MLLMISTVGPVGKWKAMARPSLPSSLDSTLPGISREVLSVSMEPKYQCQQCKDILRKPFQ
AQCGHRFCVFCFKQLTSSGPIPCEACRAEGIFEETVSVLNIEVAFPDNAARREIDSLPAK
CPNEGCSWSGTLKEYEAQHEGRCDFERIKCEACQALILSSEKDRHNERECEARTLNCKYC
KVTFNFKEIKAHDEICQKFPMQCKDCGKKKIPREKFQEHIKSCAKSKSACQFREIGCRAV
VDNSKQQDHEQTSVMEHMRLLLSVLSSLRLPAGDWQDDSGLGLYRGPEDAPPVGAHAVNH
NAGRGGSPGVQQKVSALENIVCVLNREVERSALTLEALSRQHRLDQEKIENLANKVRQLE
RILTTRDLQLAESEQSLRELQFCTYDGVFIWKIADFSRRRQDAVGGRAPAMFSPAFYSSK
YGYKMCLRLYLNGDGTGRGTHLSLFFVVMRGKYDALLKWPFSQKVTLMLLDQNNREHIID
AFRPDVSSTSFQRPISEMNIASGCPLFCPLSKLAGKSSYLRDDTIFIKAIVDLTGL
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgttgttgatgatcagcacagtgggccctgttggtaaatggaaggcaatggcacgtcca
tctttaccatcctcattggactccacattacctggaatatctcgagaagtgctgtctgtg
tccatggaaccaaaatatcaatgtcagcagtgcaaagatattcttagaaaacctttccaa
gcacagtgtggacatcgcttctgtgtgttctgtttcaaacaactcaccagctcagggccc
ataccctgcgaagcctgtcgtgctgagggtatatttgaagagaccgtgtcagtgctcaat
attgaagtggcatttcctgataatgccgcacgaagagaaattgatagcttgcctgcaaaa
tgtccaaatgaaggatgtagttggtctggaacactgaaagagtatgaggctcaacatgaa
ggtcgttgtgactttgaacgtataaaatgtgaagcatgtcaagcactcatcttgtcaagt
gagaaagatcgccacaatgagcgggaatgtgaggccagaaccctgaactgcaaatactgc
aaggtcacattcaactttaaagaaattaaggctcatgatgaaatatgtcagaaatttccc
atgcagtgcaaagactgtggtaaaaagaaaatccccagagaaaagtttcaagagcacatc
aagtcttgtgcaaagtctaaatcggcgtgccagttcagagaaattggctgcagggcagtg
gttgacaatagtaagcagcaggatcatgagcagaccagtgtgatggaacacatgcgtctc
ttgctgtctgtgctgtcctctctgcgtctgccggccggagattggcaggacgattctgga
ctaggattgtatcgcggacctgaagacgcacctccggtgggggctcatgctgttaaccat
aatgcaggaagaggaggcagtccgggtgtacagcagaaagtctcagcattggagaacata
gtgtgtgtgttgaacagggaggtggagcgatcggccctcaccctggaggcactatcccgt
caacatcggctagaccaggaaaagatagagaacttggcaaacaaggtgcgacagctggaa
cggattttaaccacgcgagatctacagttagccgaatcagagcagtccttgcgggagctg
cagttttgtacatatgatggagttttcatttggaaaatagcagacttctctcgtcgcaga
caagatgcagtcgggggccgggcacctgccatgttctcacctgcgttctactccagtaaa
tatgggtataagatgtgtctgagactatacctgaatggtgatggcacaggacggggcacg
catctttctctattctttgtggtcatgaggggcaaatatgatgcactgctgaagtggccc
tttagccagaaggtgacattgatgttgttggaccagaacaacagagagcacatcattgac
gccttcaggcctgacgtgagctccacatccttccagaggcccatcagtgaaatgaacata
gccagcggttgccctctcttctgccctctctctaagctggcaggcaaaagctcatatctt
cgagatgacaccatatttattaaagccattgtcgacctcactggcttataa

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