KEGG   Carassius auratus (goldfish): 113098081
Entry
113098081         CDS       T07313                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like
  KO
K06752  MHC class II antigen
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04145  Phagosome
caua04514  Cell adhesion molecules
caua04672  Intestinal immune network for IgA production
caua05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:caua00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    113098081
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    113098081
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    113098081
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    113098081
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:caua04147]
    113098081
Exosome [BR:caua04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113098081
  Exosomal proteins of epithelial cells
   113098081
  Exosomal proteins of breast milk
   113098081
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 C2-set_2 Ig_2 I-set Ribonuc_P_40
Other DBs
NCBI-GeneID: 113098081
NCBI-ProteinID: XP_026118851
Ensembl: ENSCARG00000051329
UniProt: A0A6P6PC48
LinkDB
Position
Unknown
AA seq 234 aa
MEGFLRVTLIGVCVLYSNAQSYHEYGLIEACGDSDQKDFIVQIDDEQVAHTDFKEQREIF
TLPDFVAQIEFPSLYEDAKKATSICRTIIDMLKDVYINSSEPIEPPWNSVYPKSDPQLNA
KNTLICHVTGFFPPPVRVSWTKNNVNVTDESTLSRYYPNKDGTLNVFSRLSFIPEEGDIY
SCSVEHKALQQPQTRTWDVEITEPSNGPSVFCGVGLALGLLGLVTGVFFIAKGN
NT seq 705 nt   +upstreamnt  +downstreamnt
atggaaggattcttaagagttacactcatcggtgtctgtgtgctttacagtaacgcccaa
agttaccatgaatatgggctgattgaagcatgtggtgactcagatcaaaaagatttcatc
gtccaaattgatgatgaacaggtggctcacactgacttcaaagaacagagagaaatcttt
acattacctgactttgttgcccagattgagtttccatcactgtatgaggatgctaaaaaa
gctacatctatttgtagaaccatcattgatatgcttaaagatgtgtacatcaattcatct
gaaccaattgaacccccctggaactcagtttatcccaaaagtgatccacagttgaatgcc
aagaacacccttatctgtcatgtgactggattcttccctccacctgtcagagtctcatgg
accaagaacaatgtgaatgtgacagacgaatcaactctcagcagatattaccccaacaaa
gacgggacattgaatgtattttctcgactgagtttcattccagaggaaggagacatttac
agctgttctgtggagcacaaagcccttcaacaacctcaaaccagaacatgggatgtagag
ataacggagcccagcaatggtccatccgtattctgtggagttggtctggctcttgggctc
ttgggtctcgtcactggagtcttttttattgccaaaggaaactga

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