Carassius auratus (goldfish): 113104475
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Entry
113104475 CDS
T07313
Name
(RefSeq) plakophilin-1-like isoform X1
KO
K10387
plakophilin 1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
caua04812
]
113104475
Cytoskeleton proteins [BR:
caua04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
113104475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
HEAT
Atx10homo_assoc
HEAT_2
RIX1
PIR2-like_helical
Motif
Other DBs
NCBI-GeneID:
113104475
NCBI-ProteinID:
XP_026121882
Ensembl:
ENSCARG00000030233
UniProt:
A0A6P6PMB2
LinkDB
All DBs
Position
6:26150756..26164862
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AA seq
737 aa
AA seq
DB search
MMPEPLKSALSLGDVEDTSLALPSDRELRSAQQRVLEQVHTIKRSKSKYSSKSVSGLPSP
TSPESDSVFHDFKYSPGASHSGPSFSRGGNMTNGGMQRQGFVRQAANSRSFSGQRVTSGP
SKIDRPFYSATGTLPDQTRTTNQLYSYKSTRSAPDLGFQSTGNTGANGTNVRTQTTRQTL
IRVPNTQPAQAYGNGNVPRMPNSNQAGAMQRTVRRPSSLQSNGESRMSMIRTGQAKDFSG
MNSEKLLADMTMQDAIEYLYSTDESVQLCGAAYIQHSTFADEKAKQEVLTLKGIPPLVNL
LNSPSPQVQETVAAALRNVVFKNQANKEEVRRCGGITQTVQLLGDTSSETQKHLTGLLWN
LSSADNLKPDLLRVALPVLTEKVIEPFSASSDDNSNSSLAPDVFYNATACLRNLSASKLA
NRHAMRNCKGLIDSLMRYTENCINAGTPDNQSLENCVCILHNLTYQLETEMPTLFTKINA
LASSARNRSSPSETGPIGCFSSQSQKLQQEQSVFDYPVMEDNNPKGAGWLFHSKALQMYL
NLLSSSERDATLEASCGALQNLTATDGLVSNVLSDTIIQKLNGLKYISPLLQSPNAALQK
SAVALIGNLSRSTRTNKTMARQTLPQLVGFLNSGFTKGDSSPEYDSTMATAIHSAHTLMK
ADPEISKSLLNNSLINSFNNMSLNLGLPKSSTAAGVLLHSLWSEKNFQSFLKKQGMIKKS
FVNDTTSAAFRSLQVID
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccgaacctttaaaatcggctctgtccctcggagatgtggaggacacgtccctc
gcgcttccgtccgatcgcgagctgagatccgcgcagcagcgagttctggagcaggttcac
accatcaagaggagcaagtccaaatacagcagcaaaagcgtgtctggtctcccgtccccc
accagccctgaaagtgacagtgtttttcacgacttcaagtattctcccggcgcgtctcac
agcggcccctcgttcagcagaggaggaaacatgacaaatgggggtatgcaaagacaaggc
tttgtgcgccaggccgccaactcccgcagcttcagcggtcagcgggtgaccagcggcccc
agcaagatcgatcggcccttctacagcgctacaggcaccctccctgaccaaacccggacc
actaaccaactgtacagctacaaatccactcgcagcgctccagacctgggcttccagtcc
accggcaacaccggggccaacggcaccaatgtacgcacccaaaccaccagacagaccctc
atcagggtgccaaatactcaacctgctcaggcttacggaaatggcaatgtccccagaatg
cctaacagcaatcaggccggcgccatgcaacggaccgtgagacgcccgtcttccctgcag
tccaacggagagtccaggatgtccatgatcaggaccggacaggccaaggacttctctggg
atgaactcagagaagcttctggccgatatgacgatgcaagacgcaatcgagtatctgtac
agcacagatgagagcgtccagctgtgtggagccgcttacatccagcacagcaccttcgct
gatgaaaaagccaagcaagaggtgctgaccctgaagggcattcctccgctggtcaacctg
ctgaacagccccagtcctcaggtccaggagacggtggccgctgctctgagaaacgtggtc
ttcaaaaaccaggccaacaaagaggaagtgcggcgctgcggaggaatcacacagactgtg
cagctgctcggagacaccagctctgagacacagaaacacctgacaggtctcctgtggaac
ctctcctctgcagataacctcaagccggatttgctccgcgtagccttgcctgtgctcact
gagaaagtcatagagccgttttcagcaagttcagatgacaactccaacagcagcctggca
ccagatgtcttctacaacgccacggcatgccttcgcaacctaagcgcctccaaactggcg
aaccgacatgcaatgcgcaactgcaaaggcctcatcgactcgctcatgcgctacacagag
aactgtataaatgccgggacacctgacaaccagtctttggagaactgcgtctgcattctg
cacaatctcacctaccagctggagaccgagatgccaactctcttcactaaaataaatgct
ctggccagttctgctcgcaatcgctctagcccttcagaaactggtccgatcggctgtttc
agctcccagagccaaaaactgcagcaggagcagagcgtctttgactatccagtgatggag
gacaacaatcctaaaggtgccggctggctcttccactccaaagcccttcagatgtacctc
aatctgttgagctccagtgaaagagacgccactcttgaggccagctgtggagcgctgcag
aacctcacagccaccgatggcttggtatcgaatgtattgagtgatacgatcatccagaag
ctcaacggtcttaagtacatcagtccgttgttgcagtcgcccaatgctgctctacagaaa
agtgcagtcgctctgatcgggaatctgtccagatccacacgtacaaacaaaaccatggct
cggcagactctcccacagctggtcgggttcctgaactcagggttcacgaagggcgactcc
tcgcccgaatacgacagcaccatggccacagctattcacagcgcacacaccctgatgaag
gcggaccccgagatcagcaagagtctgctgaacaacagcctgatcaactccttcaacaac
atgagtctcaatctgggtctgccgaagtccagcactgcagcaggagttctccttcacagt
ctgtggtcagaaaagaattttcaaagtttccttaaaaagcaaggcatgattaagaagtct
tttgtgaatgacacaacgtcagctgctttcagatctcttcaggtgatcgattaa
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