Carassius auratus (goldfish): 113106057
Help
Entry
113106057 CDS
T07313
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2-like
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
113106057
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
caua04054
]
113106057
Pattern recognition receptors [BR:
caua04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
113106057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_6
NOD2_WH
LRR_4
AAA_16
AAA_29
T3RM_EcoP15I_C
AAA_22
AAA_30
Viral_helicase1
nSTAND3
T2SSE
Motif
Other DBs
NCBI-GeneID:
113106057
NCBI-ProteinID:
XP_026123381
Ensembl:
ENSCARG00000043113
UniProt:
A0A6P6PRE8
LinkDB
All DBs
Position
7:complement(15955816..15962449)
Genome browser
AA seq
982 aa
AA seq
DB search
MTAHQLILKQRAELLAVLCGGGNAEPLDCVLDLLLACEVLVWEDYLSIRVAEKPLCSNVR
HLLDVVYDKGEDACSLFLAAMNQVVPEEQKAGLCFGKECAVVEKNRPDTATLTLLADRPV
LVRKLRDNIDGALNALLTTGCFTIKDCDAVQLPVYTPSQQVRRLLDQVRFKGETAAKTLL
QYLEQTETTRPNPEDKENHLSANCLLYQKKLRSSVAAQSHSLSTYGGTGRFSLDDIYTDG
LLEVIDGSGETLTLGLEDVVGPLGTLNEEADTVLVSGEAGSGKSTLLQRLHLLWAREALL
TNTFLLFPFSCRKLNAEQRELSLKELLFLHCCWPDRGQDEVFQFILDHPNLALFTFDGLD
EFKQGFTDEERHCCPTKQVPIPVLLFNLLQGTLMKGVMKVATSRPQAVGPSLKRYLRKEV
LLKGFSPGGIDCFVKKHHSDPAMARRVIESLQANTVLLSLCHIPVFCWIVTKCHQELLGG
QDVITQTITDVYLLVLQHFFQRKSPQSQGVLGKAWLEEHLDTVLKLGQLALEGLEASCYV
FSGYELQRNGLTEKEVSLGFLIYCNDLSVTDCKRYEFLHITLQCFFAALYVVLNRNIDRS
AVSRLFHPQYRQLSGLSQRCLGHCIDSSVEELESHVAETPNLQITAQFVSGLLSQRHHDL
LLECCPIAVRERKVKQVVKSLSKGMQRHFKSIPRPVEGEKKSMHAMPSFVWLIKCIYEMQ
DNSIAQDTMAKLDVEHLKLTYCNIGPVECTALAYVLKYLRNPVGLQLDNNSVGDVGAEQL
LPCLHICHSLYLRNNNISDEGIRKLLEKGMKCENFQKIALFNNNLTDACTQHFALLLKSK
QNFLSLRLGNNNITSQGAEQLAEGLSYNQSLQFLGLWGNKIGDRGAEALAAALKNSTTLI
WLSLVDNGVGSAGACALAKLISQGKTLEQLWLNKNCINREGVECLIEALKMNSSVQEVWL
RGNNLSPEEEEELSKQESRLIF
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgactgctcaccagttgatcctaaaacaacgagcagagcttctggcggtcctgtgtggt
ggaggcaatgccgaacctctggactgtgttctggatctgctcttggcttgtgaggttctt
gtctgggaggattacctaagcatacgagtggcggagaaacctctatgttccaatgtcagg
cacctattagatgtggtgtatgataaaggagaagatgcttgcagccttttcttggctgcg
atgaaccaggtcgtacctgaggagcagaaggctggcctgtgttttgggaaagaatgtgct
gtggtagagaagaacagaccagacactgcaactttaacgctactggctgacaggccagtg
ttagtgagaaagctcagagataatattgacggagcactgaatgctttattgacaactggc
tgcttcaccattaaagattgtgatgcggtgcaactacctgtatacacaccctcacaacag
gttcggcggctgttagaccaagtgaggtttaaaggggaaactgctgcaaagaccttacta
cagtatctagaacaaacggagacaaccagaccaaaccctgaagataaagaaaatcatctt
tctgccaattgtctgctctaccagaagaagctgcgaagctctgttgctgcccagtcccat
tcccttagcacctatggtgggacaggacgtttctccttggatgacatttacaccgacggt
ctgcttgaagtgatcgatggctctggagaaactcttacgctagggctggaggatgtggtg
ggtcccttggggactcttaatgaggaggctgacaccgttcttgtgtctggggaggcagga
agtggcaaaagcacactgcttcagcgactgcacttgctctgggcaagagaagctttgctc
acaaacactttcctgctgtttcccttcagttgccgcaagctaaacgcagaacagagagaa
ctgtctctgaaggagctcctcttcctgcactgctgctggcctgatcgaggtcaggatgag
gttttccagtttatcctagaccatcctaatttggctctctttacctttgacgggctcgat
gagtttaaacaggggttcacagatgaagaacgccactgctgccccacaaagcaagtgcct
atacctgttctgcttttcaatctgctgcagggtacgctaatgaagggagttatgaaggtg
gccactagcaggccacaggctgtaggcccatcactgaagcgctatctccgcaaagaagtg
ctcctgaagggtttttctcctggagggattgactgctttgttaagaagcatcacagtgac
cctgctatggctagacgtgtaatagagtccctccaggctaacacagtgttattaagtctt
tgccacatcccagtcttctgctggattgtgaccaagtgccaccaggagcttctaggtggt
caagacgttattacccagacgatcactgatgtctacctcctggttttacagcatttcttt
cagcgaaagtcacctcagtcccaaggagttctgggaaaggcctggttggaggaacatttg
gacacagttttaaaacttggacagctggcactggaaggtcttgaagcctcttgttatgtg
ttctcaggatatgagctccaaagaaatggactgacagaaaaggaagtcagcctgggtttt
ctcatttactgcaatgacctatctgttacagactgtaaacgctatgaatttctgcacatc
accttacaatgcttcttcgctgctctctatgtcgttctcaatcgtaacatcgatcgttct
gctgtctccagactctttcatccccagtacaggcagttgtcaggtctgtctcaaagatgt
ctgggacattgtattgacagttctgtagaggagctggaatcccatgtggcagagacacca
aacctccagattacagctcagtttgtgtcaggacttttatcccagcggcaccatgatctc
ttgctagaatgctgtcctattgctgtgcgggaacgcaaggtaaagcaggtagtgaagtct
ttgtctaaaggtatgcagaggcatttcaagtccattcctcgtcctgtagagggtgaaaag
aagagcatgcacgccatgccaagttttgtttggctaattaagtgcatctatgaaatgcaa
gacaacagtattgctcaagataccatggctaagttggatgttgagcacctgaagctcacc
tactgtaacattggtcctgtggaatgtactgcgctggcgtatgtgctgaagtacctgcgg
aatcctgttgggctccagttggacaacaattcagtgggagatgtgggcgcggagcagctt
cttccatgtctacatatttgtcactccctttatttaaggaacaataacatatcagatgaa
ggaatccggaaacttctggaaaagggaatgaagtgtgaaaacttccaaaaaatagcgctt
ttcaacaacaacctcacagatgcttgcacccaacactttgctttgctgttaaaatcaaag
cagaactttctgtctttgaggcttggaaacaataacatcacgtcgcagggagcagaacag
ctggcagaaggcctaagctacaaccagtctttgcagtttcttggattatggggtaataaa
attggggataggggagctgaggcattggcagctgcactgaaaaatagcacaacgctaata
tggctaagtctggtggataatggcgtgggcagtgcaggtgcatgcgctctggctaaactc
atcagtcagggcaaaactctggagcaattgtggctaaacaaaaactgtatcaacagagag
ggggttgagtgtctaatagaggcactgaaaatgaactctagtgttcaggaagtgtggctg
agaggaaacaatctgagcccagaggaagaggaggagctgagcaagcaagaaagcagattg
atcttctga
DBGET
integrated database retrieval system
