KEGG   Carassius auratus (goldfish): 113107870
Entry
113107870         CDS       T07313                                 
Name
(RefSeq) F-box/WD repeat-containing protein 7-like isoform X1
  KO
K10260  F-box and WD-40 domain protein 7
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    113107870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:caua04131]
    113107870
   04121 Ubiquitin system [BR:caua04121]
    113107870
Membrane trafficking [BR:caua04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    113107870
Ubiquitin system [BR:caua04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     113107870
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Gbeta WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR41 DSE1_N Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_MABP1-WDR62_2nd F-box-like ANAPC4_WD40 Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd ASA1 Beta-prop_DCAF12 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_EIPR1 WDR90_beta-prop_4th F-box Beta-prop_ACSF4 Beta-prop_Aladin Beta-prop_NOL10_N CFAP251_N Beta-prop_SPT8 PAC11 Beta-prop_VPS8 WD40_MABP1-WDR62_1st PQQ_2 Beta-prop_RIG_1st WD40_RFWD3 Ge1_WD40 Beta-prop_NWD2_C TRM82_WD KNTC1_N Beta-prop_LRRK2 Beta-prop_IFT140_1st eIF2A CDtoxinA Beta-prop_IFT140_2nd Beta-prop_pof12 PALB2_WD40 Beta-prop_WDR19_2nd Vts1 Nop14
Other DBs
NCBI-GeneID: 113107870
NCBI-ProteinID: XP_026126456
Ensembl: ENSCARG00000034272
UniProt: A0A6P6PYL6
LinkDB
Position
1:complement(32253948..32357611)
AA seq 701 aa
MNQDLLSGGSSSRASQPPRPGAGNSSSGGAEHMNLVLEEQQRREAAEEEEGRRREVNGDQ
KGISEWMWEQEQRRRHHDDDDEEEENNGGREARLHSQEDDDERPEDGLEEMDQDSDEFER
SEEEEEEEEDEEEGLHSPSLRTPASDRNDNSEQSSGRQHQRSSSFCKNKMKRKLDHDSEV
RTSGKKPCHSPTGLPFPATPTTFRDIRVVIGQGQQRRRITSIQPPTGLQEWLRTFQSWSG
PEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISHLPRELALHVLSFLEPKDLLQAAQ
TCRYWRILAEDNLLWREKCREEGIDEPLYIRRKKVIKPEFTHSPWKSAYIRQHRIDTNWR
RGDLRSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS
SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVW
DIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS
LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW
DIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLWDLRTGEFIRNLVTLESG
GSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDMK
NT seq 2106 nt   +upstreamnt  +downstreamnt
atgaaccaggatctgctgtcggggggcagcagcagcagggcgtcccagccgccgaggcct
ggggcaggtaacagctcctccggcggcgcggagcacatgaacctggtgctggaggagcaa
cagagaagagaagcagccgaggaggaggaaggacggaggagggaggtgaacggagaccaa
aagggcatttctgagtggatgtgggagcaggagcagcgtagacggcatcacgacgacgac
gacgaagaggaggagaataacggcggaagggaagcgagacttcattcacaggaagatgac
gacgagcggccggaggatggcttggaggaaatggaccaggatagtgatgagtttgagcgt
tcagaagaagaagaggaggaggaggaagatgaggaggaaggcctacactctccctccctc
aggacccctgcgtcggaccgtaatgataactcggagcagtcctctggacgacagcaccag
cgctcttcctcgttttgcaagaataagatgaagaggaagttggaccatgactccgaggtt
cgaacttcaggaaaaaagccctgtcacagtcctacaggactgccgttcccagccaccccc
actacgtttcgggacattcgagtggtcattgggcagggtcagcagagacggcgcatcacg
tccatccagcctcccaccggtctgcaggaatggctgcgcacctttcagagctggagtggt
ccggagaagctgctggcgctggatgagttgattgacagctgtgagcccacgcaggtgaag
cacatgatgcaggtgatcgaaccacagtttcagagagacttcatctcacacctgcccaga
gagttggccttacacgtgttgtcattcctggagcccaaggatctgcttcaggcagctcag
acgtgtcgttactggcgcatcctagcggaggacaacctgctctggagggagaaatgcaga
gaagaaggtattgacgagcccttgtacataaggagaaagaaggttatcaagccagagttc
acacacagtccctggaagagtgcctacattagacaacacagaatagacaccaactggagg
agaggagacctcagatcaccgaaggtgttgaaaggccatgacgatcatgtgatcacctgt
ctccagttctgtggaaaccgcatcgtgagcggctcagacgacaacacgctcaaagtatgg
tctgctgttaccgggaagtgtttacggacgttagttggccacaccggcggggtctggtcc
tctcaaatgcgagacaacatcattatcagtggctccacagaccgaacgctgaaggtctgg
aatgcagagacgggagaatgtatccacacgctgtacggtcatacctcaacagtgcgctgt
atgcacttgcatgagaaaagggtggtgagtggttcccgggacgccacgctacgggtttgg
gacattgagacgggtcagtgtttgcacgtgctcatgggtcacgtggcggccgttcgctgc
gtacagtatgacggccgtagggtggtcagcggagcctacgacttcatggtgaaagtgtgg
gatcctgaaacagagacctgtctacacacactccagggtcacaccaacagagtctactcc
ctacagtttgacggcatccatgtggtgagcggttcgttggacacgtcgatccgggtgtgg
gatgtagagactggaaactgtattcacacgctcacaggtcatcagtctctcaccagcggc
atggagctcaaagataacatcctggtctccggaaacgcagactccaccgtcaagatctgg
gacatcaagaccggccagtgcctacagacactgcaaggtccccacaagcaccagagtgca
gtaacctgtctgcagttcaacaagaattttgtcatcaccagctctgatgacggtacggtg
aagttgtgggatcttcgtacgggcgagttcatccgtaatctggtcacactggagagcggc
ggcagcggcggcgtggtctggcggatccgtgcatccaatactaaactggtttgtgcagtg
ggcagccgtaacggcacggaggaaaccaagctcctggtgctggacttcgacgtggacatg
aagtga

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