Carassius auratus (goldfish): 113109117
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Entry
113109117 CDS
T07313
Symbol
rapgef4
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04081
Hormone signaling
caua04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
113109117 (rapgef4)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
113109117 (rapgef4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113109117 (rapgef4)
Membrane trafficking [BR:
caua04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
113109117 (rapgef4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
Motif
Other DBs
NCBI-GeneID:
113109117
NCBI-ProteinID:
XP_026128458
Ensembl:
ENSCARG00000054818
UniProt:
A0A6P6Q4P5
LinkDB
All DBs
Position
9:complement(33908015..33962952)
Genome browser
AA seq
1029 aa
AA seq
DB search
MIRCMISQKMVAAHTSSHPSASAEWIICLDKRPEERSGEDVDIILARLKRVKAFEKFHPS
LLQQICLRGFCECLEKGITLYRQGDIGTNWYTVLSGSLDVKVSETANHQDAVTICTLGIG
TAFGESILDNTPRHATIVTREFSELLRIEQRDFRSLWESYRQCMAGLLVPPYGVMESIPH
TDRMPDKENLDHGSPGSSSKHLNKKSFIQSPTKLHPKSIAQVPSGKILRAGKVLRITILS
RAPHMIRDRKYHLKTYRQCCIGTELVDWLMQHTSCVHSRVQAVGMWQVLLEEGVLNHVDQ
ELSFQDKYLFYRFLEDETEDAPLPNEEEKKESDEELQDTLLLLSQIGPDAHLRMILRKQP
GQRTVDDLEIIYEELLHIKALSHLSTTVKRELAAVLIFESHAKAGTVLFNQGEEGTSWYI
ILKGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRV
LRDVEANTVRLKEHEEDVLVLEKTNNRASTSSPLKYTVMSGTPEKILEHLLETTKLDSQF
TESDPALDDFLLMHCVFVPNSQLCPLLMAHYHSQSSQGSEQERMDYSLNNKRRVIRLVLQ
WAAINTDHLQEEDSSFHFLQEFYETVFEDSRLIPALKEQLPELEKIIKQNCDDGRPSQKK
HKVLLRQFSTGNDRLQKKQPIKSTDEILFKVYCSDHTYSTIRVPVAASVREVITAVTDKL
GSGDDLLLIHLNSAGDKELLKPSDVSIFSSLSINGRLFVSPRDQIDSLTPLPEQEGPSAG
SMSTFELMSSKDLAHQMTLYDWELFGCVHEHELIYHTFGRQHFKKTTANLDLFLRRFNEV
QLWVVTEVCLCPTLSKRVQLLKKFIKIAAHCKEFKNLNSFFAIIMGLGNPAVCRLSQTWE
KLPSKFKKFYGEFENLMDPSRNHRAYRLTVAKLEPPIIPFMPLLIKDMTFTHEGNKTFTD
RLVNFEKMRMIANTVRIMRYCRSQPFSQEAPQATGKSHQDVRSYVRHISVIDNQRTLSQL
SHRLEPRRT
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggtgcatgatttcacagaagatggtcgcggcacacacctccagccacccgtcc
gcttctgctgagtggatcatctgtctggataagagaccggaggagcgttcgggggaggat
gtggacatcatcttggcccgtctgaaaagagtgaaggcctttgagaagttccacccttct
ctacttcagcagatctgtctgcgtggcttctgcgagtgtctggagaaaggcatcacactg
tacaggcagggtgacattggcactaactggtacaccgtcctgtccggttccctagatgtc
aaagtctcagaaactgcaaaccatcaggatgctgtcactatctgtacgctgggcatcggc
acggctttcggggagtctattctggacaacacgccgcgccacgccacaatcgtcacccga
gagttcagtgaacttctgcggattgagcagagggactttaggagcctgtgggagagttat
cgtcagtgtatggctggtctgctggtccctccctacggtgttatggagagcatcccgcat
actgacagaatgcctgacaaagagaatctggaccacggctcacccggatcatcatccaaa
cacttaaataagaaatcattcattcaaagtcccaccaaacttcaccccaaatccatcgct
caggtgccgtcaggaaagatcctgcgggcaggtaaagtgttacgaatcaccatcctgtcc
cgagcacctcacatgatcagagacaggaagtaccaccttaaaacatacaggcagtgctgt
ataggcacggagctcgttgattggctgatgcagcacacttcctgtgttcactcgcgtgtt
caggctgtagggatgtggcaggtgctgctggaggagggcgtcctaaaccacgtggaccag
gagctgagttttcaagataagtatctgttttatcgcttcctggaggatgagaccgaagac
gcacccctccccaatgaggaggagaagaaagagagcgatgaagagctacaggacaccctc
ctgctcctctctcagatcggacctgacgcccatctgcgaatgatcctgaggaaacagcct
ggccagaggacagtagatgacctggagatcatttatgaggagctgctgcatattaaagcc
ttatcacatctctccaccactgtgaagagggaactcgctgctgttctgatatttgagtcc
catgccaaagcaggcacagtgttgtttaatcaaggggaggagggcacgtcatggtacatc
atcctgaagggctccgttaacgtggtgatctatggaaagggtgtagtgtgcacactacat
gagggagatgacttcgggaagctggctctggtgaatgacgcacctcgggcagcgtctatc
gtcctgagagaggacaactgccacttcctgagagtggataaagaagacttcaacagagtc
ctcagggatgtggaagcaaacacggtccgtctgaaggaacatgaggaggatgtgttagtt
ttggagaaaacgaacaacagggcctccacttcctctcctctcaagtacactgtgatgtcc
gggactccggagaagattctggaacatcttctggagacaacaaaactcgactcccagttc
acagagtcagatcctgctctggatgactttttgcttatgcactgtgtttttgtcccgaac
agtcagctgtgtcctctactcatggctcactatcattctcagtcgtctcagggcagtgaa
caggagcggatggattactctctcaataacaagcgcagggtgattcgtctggtcttacag
tgggccgccatcaacacagaccacctgcaggaggaggacagctctttccatttcctccag
gagttttatgagacagtgtttgaagattccagactcattccagctctcaaagaacagctg
cctgaattagagaagatcatcaagcagaactgtgatgatggccgtccctctcagaaaaag
cacaaagtcctgctgcgtcagttcagcacggggaatgacagactgcagaagaaacagcca
atcaaaagcacagacgagatcctctttaaagtgtactgcagtgatcatacctactccact
atccgagtgcctgtagctgcatctgtcagagaggtcatcactgcagttaccgataaactg
gggtcaggagatgatcttctgctcatccacctcaactcagccggagataaagagcttcta
aagccatcagatgtgtccatcttctcatctctgagcattaatggtcgtctgtttgtcagc
ccgagggaccagatcgactctttgaccccgctgcccgagcaagaagggccgtctgcagga
tccatgtccacctttgagctcatgagctcaaaagatctggctcatcagatgactctgtac
gactgggagctcttcggctgtgtacacgagcatgagctgatctaccacacgtttggccgt
cagcacttcaagaagaccacggctaatctggatctgttcctgcggcgctttaatgaggtc
cagctgtgggtggtcacagaggtttgtttgtgtcccacgctcagcaaacgcgtccaactg
ctcaagaagttcatcaagatcgccgcgcactgtaaagagtttaagaatttgaactcattc
tttgccattatcatgggcctgggaaaccctgcggtctgtcgcctcagtcagacatgggag
aaactgcccagcaagttcaagaagttttacggagagtttgaaaacctgatggatccctcc
agaaaccaccgagcgtatcgacttacagtggccaagttagaaccgcctatcattcccttc
atgcctttattaattaaagacatgactttcacacatgagggcaacaagacgtttactgac
agattggtgaacttcgagaaaatgagaatgattgcaaacacagtccgaatcatgagatac
tgccggagtcagccgttcagtcaggaagcaccgcaggccactggtaaaagccatcaggac
gtgcggagctacgtgcgtcacatcagtgtgatagataaccagcgtaccctgtcccagctg
tcccaccgactggagccgcgcaggacctga
DBGET
integrated database retrieval system
