Carassius auratus (goldfish): 113109853
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Entry
113109853 CDS
T07313
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1-like isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04530
Tight junction
caua04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
113109853
09142 Cell motility
04810 Regulation of actin cytoskeleton
113109853
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
caua04990
]
113109853
Domain-containing proteins not elsewhere classified [BR:
caua04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
113109853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_Tiam1
Tiam_CC_Ex
PH
PH_9
RBD
PDZ
SOS1_NGEF_PH
PDZ_6
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
113109853
NCBI-ProteinID:
XP_026129442
Ensembl:
ENSCARG00000057293
UniProt:
A0A6P6Q8G2
LinkDB
All DBs
Position
10:11319215..11368704
Genome browser
AA seq
1626 aa
AA seq
DB search
MGNIESQNGDHAYYGEGQGHLSRKHMTRSLRISNKQSRRSRHASSSKAEHRNSETSTKSS
STPSIPQSLSENGLEPFNEKNALEGYRGTIWVDKMAMNLRPMSFHDNMGDPTTTPGSEDG
VELDTVVADNCDYEGLFTGEDTYLQRTRDGPREGGSFMKKRSKSADMWREDSMEFSLSDL
SQEHLTSTEEIIGTNEEEDKGFTNCGGRRRTSSPRTLESHSGERANSLDELCTQRLPPLR
GSHHLYNGHNPERKQGGVMNGEILSPAEEEGNAYGAYTLPCRRSHCLSEGRSNHQITICS
RMQGRRAQTTHDITAGEGSEYGDSGIDGGAAEVEHSSRRCKAMSASFSVYSTASGSIFAG
SDSGSSSGGGGDRERQPGGDQGVYENFRQELDLNSRQTWDCLEEAVSAASDERSSGTLSS
IYPSDILISTVQGTVRKAGLLAVKNFLGHKKNKRVEPAAKRKWKQYWVSLKGCTLFFYET
DGRSGIDHNSIHKHAVWVENSIVQAVPEHPKKDFVFCLSNALGDAFLFQTSGQTELENWI
TAIHSACAAAVARQHHREDTVRLLRSEIKKLEQKIDMDEKMKKMGEMQLSAVTDGKKRKT
ILEQIFLWEQNLEQFHMDLFRYRCYLSSLQGGELPNPKRLLAVASRPTKLSMGRLGIFSV
SSFHALVAARTDGGIQRRTQALSRSSSKRKSRFSSLWGLDTTSKKKTKGRPSINQVFVDG
EESIKRNLEHMFEDSGKEMLKDQEGLVKSLDQHKTDSDVWVPDYLTPSWVSLPDDRPVLA
IIQPGDSAMEALEALCRTYRLDLSKHYIRLKFLIENQVQLYVPKPEEDLCDLLYKEIEIC
AKTTKVIQFDRDESCAIGYGFSVVVVEEDGGQQLHITDVKAGGLAFAKGLRAGDEILKLN
SKPASVLELADMQAAFSLPSLTLTVSTLPATDLHQLCQMPPRRSDGAQDLCTDIFSQSQE
DILDEGLGLVLHSPDDTGEDGVNLLAESPADSLEDETDSPHKSTEQVTAFCRNLHDMNTT
EGPVSCSSSSSGSSSSSSCVPSPISPLPVLFTPRQLSDADKLRKVISELVDTERTYVKDL
NILIERYLNPLQKESFLSQDELDVLFGNLAEMVEFQVEFLKTLEDGTRLVPDLDKLERVD
QFKKVLFSLGGSFLYYADRFKIYSAFCASHTKVPKVLTKAKTDPEFKAFLSERNPRQQHS
STLESYLIKPIQRVLKYPLLLRELHSLTSPDSEEHYHLDVAMKAMNKVASHINEMQKIHE
EYGAVFDQLISDQSSDKKEVADLSMGDLLLHDTVVWINPPSSLMKGKRDPELAAFVFRTA
VVFVYKDCSKHKKKIGGSHRASILDERDPFRFRHMISTDALQVRNLPNSEGSAMCEIVHM
RSESEGRPERTFHICCSSPESKKDFLKTVHSILRDKQRRQLMKTESLPPNQQYIPFGGKR
LCALKGSRPTVNRAVSAPSRTLGRRKLIRNRFTIDMSVVFDDGTSQELSPIPPTEPPLSS
LQRPQQPIRDTDRWVEDQFDLQHYENQDDVKETDILSDDDEYCQSVRAPSSEPSLEESLE
ALSVEGDEDKGLNGLSDDKPPKSHAPLKLTLLRKQCAVEGVASERDCEVIWVRRDDFKNS
CNSDIF
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacatagagagccaaaatggtgaccacgcctactacggtgaggggcagggccat
ctctcacgaaagcacatgacccgatcacttcgcatctctaacaagcagtctcgacgatca
cgtcatgcctcatccagcaaggctgaacaccgcaactctgagaccagcacaaaatcaagc
agcaccccttccattccacaatccctgagtgaaaatggcctggagcctttcaatgagaag
aatgcgttggagggctatagaggcaccatttgggtggataagatggccatgaacttgcgg
ccgatgtccttccacgacaacatgggggatcctaccaccacaccaggctctgaagacgga
gtggagttggacacagtggtggcagacaattgtgattatgaaggacttttcacaggtgag
gacacgtatcttcagaggaccagagatggtcctcgggaaggcggcagctttatgaagaag
cgctccaaatctgctgacatgtggagagaggattccatggagttttccttgtcggatcta
agccaagagcatctgacaagcacagaggagattatagggacaaatgaggaagaagacaaa
ggcttcaccaactgtggaggtcgccgtcgcacctccagcccacggacacttgagagtcac
tcaggagagagagccaactctttagacgaactttgcacacagaggctacctcctcttcgg
ggctcccaccatctctataatggtcacaatcctgagaggaagcaggggggtgtaatgaac
ggtgagatcttgtctcctgcggaggaggaagggaacgcatatggagcatacactcttcct
tgtcgtcgttctcactgcctgtcggaaggacggtccaatcaccagattaccatctgctca
cgtatgcagggacggcgggcacaaacaacacatgatatcacggccggtgagggcagcgag
tatggagacagcggtattgacggtggcgcagctgaagtcgagcattcctcacgccgttgc
aaggctatgtctgcgtccttctctgtctactctactgctagcggaagcatctttgcggga
agtgacagcggcagtagcagcggaggtggaggagaccgggaacgtcaaccgggtggagat
caaggcgtttacgagaacttccgtcaggagctggacttgaactcccggcagacgtgggat
tgcctcgaagaggcagtttcggctgctagcgatgagaggagcagtggaacgctaagctcc
atttacccctcagacattctaattagcacggtgcagggcactgtgcggaaggctggcctg
ctggctgtgaagaacttcctgggccacaaaaagaataagagggtggagccagcagcgaaa
aggaaatggaaacagtactgggtatcactcaaaggatgcactctgtttttttacgaaacg
gatggacgttcagggattgaccacaacagcatccacaaacatgcagtctgggtggagaac
agcattgttcaggctgtcccagaacatcccaagaaagactttgtgttttgtctgagcaat
gcactgggagatgccttcctcttccagacatcaggtcaaaccgagctggaaaactggata
accgcgatccactcagcctgcgccgcagccgtcgcccgtcagcaccaccgcgaggacacc
gtacgattgctgcgctcagagatcaagaagcttgaacaaaagatcgacatggatgagaaa
atgaagaagatgggcgaaatgcagctctctgccgtcactgatgggaagaagaggaagact
atcctagagcagatattcctctgggagcagaatttggagcagtttcatatggacttgttc
cggtatcgctgttacctgtccagcctgcaaggcggcgagcttccaaatccaaaacgccta
ctcgccgttgcttcccgccccaccaaactgtccatgggtcgtcttggcattttttcagta
tcatcattccatgccctggtggcagcaaggacggatgggggaattcagagacgtacccag
gccctgtcacgttcctccagtaaacgaaagagccggttctcctctctatggggtctggac
actacctcaaaaaagaaaaccaaaggcagacccagcatcaaccaggtgttcgtagacggt
gaagagtcgattaagaggaatctcgagcacatgtttgaggactctggaaaggagatgctg
aaggaccaagaaggtttggtgaaaagtcttgaccaacacaagacggacagtgacgtttgg
gtacctgactatctcacgccatcctgggtctctttacctgatgatcggcctgtgttggct
atcatacagccaggcgattcagccatggaggccctggaggcactgtgcaggacttacaga
ctggatctttccaagcactatatacggctgaagttcctcattgagaatcaagtgcaattg
tacgtccccaagcctgaggaggacctctgtgacctgctctacaaagaaattgaaatttgt
gccaagacaaccaaagtcatccagtttgacagagatgagtcctgtgccataggctatggt
ttttcagtggtggtagtagaggaggacggaggccagcagcttcatatcactgatgtcaaa
gctggaggtctggcatttgccaaaggtctgcgagcaggtgatgagattctgaaactgaac
agtaagccagcgagtgtgttggagctggctgatatgcaggctgcgttttctttgccctct
ctcaccctgaccgtcagcacgctgcctgctactgatctgcaccagctgtgccagatgcct
ccccgccgatcggacggggcacaggacctctgcactgacatcttctcccaaagtcaggag
gacatcctggatgaaggtcttggcctggtgctgcacagccctgatgacacaggcgaagac
ggggtaaacctattggcggagagccctgctgacagcctggaggatgaaacggactcgcca
cacaagagtacagagcaggtgactgccttctgtcgcaaccttcatgatatgaacaccacc
gagggtcctgtttcgtgttcctcatcttcctctggatcttcctcctcttcatcctgtgtg
cccagccccatctcacccctaccagttctcttcacccctcgccagctctccgatgctgac
aaactgcgtaaagtcatcagtgagctggtggacactgagaggacctatgttaaggacctg
aacattttgatagagcgctacctgaaccccctgcagaaggagagcttcctctcacaggat
gagctggatgtgctttttggaaacttggcggagatggtggaattccaagtggagtttctg
aaaactctggaagatggaaccagattggttccagatttagacaaactggagagagtggat
caattcaagaaagttctgttttctcttggtggatccttcctgtactatgcagatcgtttt
aagatctacagtgctttttgcgccagccacacaaaggtcccaaaggtccttaccaaagct
aaaacagacccggagttcaaggcattcctgtctgagaggaaccccaggcaacagcactct
tccacgctggagtcctacctgatcaaacccattcagagagtcttaaaataccctctactc
ctgagggagcttcactcccttaccagccctgacagcgaggaacattaccatctggatgtt
gcaatgaaagccatgaacaaagtggccagtcacataaatgaaatgcagaagattcatgag
gagtatggagctgtgtttgaccaactcatcagcgatcagagctctgacaaaaaagaggtt
gctgacctgtcaatgggtgacctcttgttacatgacactgtggtttggatcaacccaccc
tcttctctcatgaagggaaagagggacccagaactggctgcgttcgttttcagaacagca
gttgtttttgtgtataaggactgctccaagcacaagaaaaaaatcggtggatctcacaga
gcatcaatccttgatgagagagacccatttaggtttagacacatgatctctacagatgct
ctccaagttcgcaacctccctaattcagaggggtctgcaatgtgtgagattgttcacatg
aggtcagaatctgaggggagacccgagaggaccttccacatctgctgcagctctccagag
agtaaaaaagacttcctgaagacagttcattctatcctgagggacaaacaacgccggcag
ttaatgaagactgagagtttgcctccaaatcagcagtatattcccttcggagggaagcgg
ctttgtgcgctaaagggttcacgacccacagtgaacagagcggtttcagccccatctcga
accctcggccgccggaagctgatccgtaatcgtttcaccatagacatgagtgtggttttc
gacgacggcacgtcccaggagctttcacccatcccccccacagagcccccgctgtcttcg
ctccagagaccccagcagcccatccgggacacagaccgctgggtggaggatcagttcgac
ctgcagcactacgaaaaccaggatgacgtgaaggagacggacatcctcagtgacgacgat
gagtactgccaatccgtccgggccccttcctctgagccgagtctggaggagtctttagag
gccctttcagtagaaggagatgaagacaagggtctcaacggactttcggatgacaaacct
ccgaaatcccacgccccactgaagctgaccctcctgagaaagcagtgcgcggtggagggt
gtcgcttctgagagggactgcgaggttatttgggttcgcagggatgattttaaaaacagc
tgcaacagcgacatcttctga
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