Carassius auratus (goldfish): 113111974
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Entry
113111974 CDS
T07313
Name
(RefSeq) pleckstrin homology domain-containing family M member 1-like isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04140
Autophagy - animal
caua05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113111974
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113111974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113111974
Membrane trafficking [BR:
caua04131
]
SNARE
SNARE associated proteins
Others
113111974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_13
Motif
Other DBs
NCBI-GeneID:
113111974
NCBI-ProteinID:
XP_026133057
Ensembl:
ENSCARG00000031466
UniProt:
A0A6P6QI99
LinkDB
All DBs
Position
12:complement(16306109..16324923)
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AA seq
1048 aa
AA seq
DB search
MLATQTPESGPETRDVKQWIKDKIARTLKVLQKRYITTDTAVTSEDLEANLLCCALEAVF
IHGIKSKFIRFDGSQVRKGGSRGALPQPVFWSLLKTVTHRDVVQELERLSFINSDIGRCR
AWVRLALNDGLLECYLTSLLREGSNLGSYYQPGALLLDPEDREVLLTLLQGLSSMIFQLS
YKSAVLNEWTNTPLVLAGLCPPTPADEHLVGPKRKESWDTVSQSSAGSGGSDWAQEVLQR
EPRREQLNTPLTTSNQSLDTSGSSQLSSSLSSDSLLQGHELRSPEKEPWSCDTEISQHTQ
QKISAADDSSSSNQDLKEDFDVFIPASDSATQAVNDNTHKPDASLTAAQDTHQSEAHISE
QSKACSENISAETLPETQESKTLVKTATVTETPEGGQKNSPVDSPSVSALTEMVEKTSDL
KDPDALPSETFIASSSVEQSQHAAYRRSASTVSRKTSSDSLYSSCKSTSWISEDDFYKPE
KMDSPEAYAVIDIAQMNGPETPTSEPTSIQSTPSVVHRRQNGLRNPFRGLLKLGQLERRS
AVGMWWDYSCELSPFELRLYIDAEERICYENLSLLRCEDVHLSSSTEGRFRLSFPGKRIY
LRAPSRGEAEDWVDRIVEAISKLRPMIKEEQWEVLHSSSDQDVPSPTPSSPEHTNSELPD
TPQLDWTRYKDPEPDAIKEAVVYQNLEEKGWRCVLLSLSLETLRGYQVQGDSKTPLFSYP
IGSIRDVVPDVSLGSPAFFKVLTVRDTLTLRAESGEEARGWRSLIRGALDSYLETEDDGA
GQGVSAVGSVHKLVQHRLKGDGVLLSHLSTVPNERGLDAQNYKCAGCPRQIGMSLGRARL
CEFSGQYYCESCHQGDTTIIPSRMLHNWDLTARQVSKQAFKLLTQIEHEPLLHLEVLNPD
LFDHTDIMEKVQSLRLRLRFLGDYILICRSGISKQIQPRLQQRTYLLDNSDLYSVLDLQQ
IADEHYESYLQSLIQFGSKHVLSCDLCTQRGFICQICNSDNIIFPFQFDSTIRCDICKTV
FHSSCKAKCPVCPRCVRIQKYMERDLED
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgttggccacccaaacacctgagagtggcccagaaaccagagatgttaaacagtggatt
aaggacaagattgcacggacactgaaagtcctgcagaagcggtacatcaccacagacacg
gcggtcaccagcgaggacctggaggcgaacctgctgtgttgtgctttggaggccgtcttc
atccatggaatcaagagcaagttcatccggtttgatggaagtcaggtgcgcaaaggaggg
tcacggggagcacttcctcagcccgtcttctggagcctgttgaagaccgtcacccacagg
gatgtagttcaagaactggagcgtctaagcttcataaactcagacatcggccgctgcaga
gcatgggttcgcctggcgctaaatgacgggcttctggagtgttacctgacctcgctgctt
cgtgaaggctccaacctgggctcctactaccagcccggggctcttttgctggacccggag
gaccgtgaggttctcctcaccctcctgcagggtttgtcctccatgatcttccagctctcc
tataaatcagctgtgctgaatgagtggaccaacacacccctggtcctcgcgggtctgtgt
cccccaacgcctgccgacgagcatcttgtaggccccaagcgcaaggagtcttgggatacg
gtctcccagtcatccgcagggtctggaggctcagactgggctcaggaggtgctccagagg
gagcccaggagagagcagctgaacacacctctgaccacatcaaaccagagtctggacacg
tccggatcatcacagctgtcctccagcctgagctctgatagtctgctgcagggtcacgag
ctcaggagtccagagaaggagccctggagctgtgacacggagatcagccaacacacacaa
cagaagatcagcgctgcagatgacagcagttcctctaatcaggacttgaaggaagacttt
gatgtgttcataccggcttcagattctgcaacacaagctgtcaatgacaacacacacaag
cctgacgcatctctcacagctgcacaggacacacatcagtcagaggcacacatctccgag
caatctaaagcatgctcagaaaacatttcagctgagacgttaccggagacgcaagaatcc
aagactctagttaaaaccgccacagtcaccgagactccagaaggtggccagaagaactca
cctgttgattccccttcagtttctgctttgactgagatggttgagaagacctccgacctt
aaagaccccgacgctcttccttcagagaccttcatcgcctctagttcagtggagcaatcc
caacatgctgcatatagacgctccgcaagcaccgtcagcaggaaaacctcctcagactct
ctgtattcctcctgcaaatccacatcttggatatcagaggatgatttctacaaaccagaa
aaaatggacagtcctgaagcgtatgccgtcattgacatcgcgcagatgaacgggccagag
acgcctacctctgaaccgaccagcatccagtcaacaccgagtgtagtgcaccggagacag
aacggtcttcgtaacccgttcaggggtctgctgaagctgggtcagctggagcgccgcagt
gcggtgggcatgtggtgggattattcctgcgagctctctccgtttgagctgcggctttac
atcgacgcagaggagcgcatctgctacgaaaacctgtccctgttgcgctgcgaagacgtt
cacctgtcctccagtaccgagggccgattccggctctccttccccggcaaaagaatctac
ctgcgtgcaccgtctcgaggagaggcggaggactgggtggatcgcatcgtggaggccatc
agcaaactacggcccatgataaaagaagaacagtgggaggtgctccactcgtccagtgac
caggacgtcccctcaccgacaccatcaagccccgagcacaccaactctgagcttccagat
accccacagttagattggactcgttataaagacccagaaccagacgccataaaggaagcg
gtggtctatcagaacttggaggagaagggttggaggtgtgttttactttccctctccctg
gagaccctcagaggttaccaggtccaaggggactcgaagacgcctctgttctcatacccc
attgggagcatcagggatgtggttccggatgtctctttaggaagcccagccttttttaaa
gttctgactgtgcgggacactctgacgctgcgggcggagagcggtgaggaagcacgagga
tggaggagtctgatcagaggagcgctcgactcgtatctggagacggaggatgacggagcg
ggtcagggcgtctcagcagtgggcagtgtccacaaactggtccaacacagactgaaggga
gatggggtgctgctctctcacctgtctaccgtcccgaatgagagaggactagatgcacaa
aactacaaatgtgcaggttgccctcgtcagatcgggatgtctctggggagagccagactc
tgtgagttctcgggtcagtattactgtgagagctgccatcagggagacaccaccatcatc
ccctcacgcatgctgcacaactgggacctgaccgcacgccaggtttcaaagcaagccttt
aagttgctgactcagattgagcacgagccgctcctgcaccttgaggttttgaaccctgac
ctgtttgatcacactgacatcatggagaaagtgcagagcctgagactaaggcttcgtttt
ctcggagactacatcctcatctgccgcagcggcatcagcaaacagatccaacccagactt
cagcagcggacatacttactggacaacagtgatctctacagtgtactggacttgcagcag
atagcagacgagcactatgaatcttacctgcagtctctgattcagtttgggtccaagcac
gtgctcagctgtgacctttgcacccaaaggggctttatatgtcagatctgcaatagtgac
aacatcatcttccctttccagtttgacagcaccattaggtgtgacatctgcaaaacggtg
tttcattcctcctgcaaggccaagtgtccggtctgtccacgctgcgttcgcatacagaag
tatatggagagggatttggaggactga
DBGET
integrated database retrieval system
