Carassius auratus (goldfish): 113111978
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Entry
113111978 CDS
T07313
Name
(RefSeq) sodium channel protein type 4 subunit alpha A isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113111978
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
113111978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
Motif
Other DBs
NCBI-GeneID:
113111978
NCBI-ProteinID:
XP_026133065
Ensembl:
ENSCARG00000031600
UniProt:
A0A6P6QLF0
LinkDB
All DBs
Position
12:complement(16337865..16381784)
Genome browser
AA seq
1832 aa
AA seq
DB search
MASLLPPKGNRVFHRFTPESLVEIDRLIQERSTREDVEGVEEEPQAPSSDLEAGKCLPMI
YGDPPENFLNTPLEDIDPFYKTQKTFIVITKGNTIFRFTAEPALFCISPFSLVRRGAIKI
LIHSYFSMFIMITILSNCVFMTMSNPPAWSKTVEYVFTGIYTFEATIKVLSRGFCIGPFT
FLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSV
KKMVDVMVLTLFALAVFALIGLQLFMGNLRHKCIRWPIPNSTMFDDYNSTMVNDTTLNVT
DTFDFKAYIENEENQYFLEGSLDALICGNSSDAGRCPEGYTCMKAGRNPNYGYTSYDNFG
WAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYDEQ
NEATMAEAREKEEEFQRLLEQLKNQEQELQAGSKASLASLVTQSQGSNRTGSLHSLGGDD
VINDCNGRILPRLIVNRASSNKELSAEEDHRSLNSKHSMQYLDQPKLSKRTASAISVLTA
TMEVLEDSQRPCPPGWYKFADIFLKWDCCTPWIIFKKWVHFVVMDPFVDLGITICIVLNT
LFMAMEHYPMSPDFEHVLSVGNLVFTGIFTAEMVFKLIAMDPYYYFQVGWNIFDSIIVTL
SLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLSMLIKIIGNSVGALGNLTLVLAIIVF
IFAVVGMQLFGKSYKDCVCKISEDCELPRWHMNDFFHSFLIVFRILCGEWIETMWVCMEV
AGASMCLIVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSGGDDDGEMNNLQIAIGRITRG
IDWLKSFIARKLRQILGKKPPDNNEGGREGDIELCAINHLDEGKMADGLTNCLPPTLTVP
IARCESDVEDDEDSDESSDEGDGKAALDDDDSSVCSTVDYQPPEPEPEPEEEEEPEPEEP
ESCFTEGCVKRFTFLNVDITEGWGKKWWNLRRTCFTIVEHDYFETFIIFMILLSSGALAF
EDINIERRRVIKIILEYADKVFTYIFIVEMLLKWVAYGFKTYFTNAWCWLDFLIVDVSLV
SLTANLLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIF
WLIFSIMGVNLFAGKFYHCINTTTEERFPMDVVNNKSDCMALMHTNEARWVNVKVNYDNV
GLGYLSLLQIATFKGWMDIMYAAVDSREVEEQPSYEINLYMYLYFVIFIIFGSFFTLNLF
IGVIIDNFNQQKAKFGGKDIFMTEEQKKYYNAMKKLGSKKPPKPIPRPSNAIQGVVFDFI
TKQFFDIFIMVLICLNMVTMMIETDDQSAEKEDILYKINLFFIIIFTGECVLKMFALRHY
FFTIGWNVFDFVVVILSIAGLMLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRT
LLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKQAGIDDIFNFETFGGSIICLF
EITTSAGWDGLLLPILNSGPPDCDPDIENPGTDVRGNCGNPGMGIMFFCSYIIMSFLVVV
NMYIAIILENFNVAQEESGDPLCEDDFTMFDETWEKFDIDGTLFIEYSRLFDFVDALQEP
LRIAKPNRLKLITMDLPIVTGDKIHCLDILLAVTREVLGDTIEMAAMKESIEAKFTMSNP
TSASFEPITTTLRRKEEVHAAVAVQRTYRRHLLKRAIRYACFMHRSKRKVRGQNDEEPPE
TEGLIARKMDALYGSNPELAMALELQARPLPPNAQPPKPTSVMQHRVSIAYPRPQGQLTL
PVELTSEAILQSAPMMHGLCSLENATIKESVV
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcctgctcccacccaaaggcaacagagtcttccacagattcaccccagagtca
ctggtggaaatcgacaggctcatccaggagaggagcaccagggaggatgtagagggggtt
gaggaggaaccacaggctccgagcagtgatttagaggcaggaaagtgcctgccaatgatc
tatggtgacccacctgagaatttcctcaacactcctctggaggacatagaccccttctat
aaaacacagaagacttttattgtcattacaaagggaaacacaatcttcaggttcactgct
gaaccagcgctgttttgtatcagtccttttagccttgtcagaagaggagccatcaaaatt
cttatacattcatattttagtatgttcatcatgatcaccatcctgtccaactgcgtgttc
atgacaatgagtaaccctccagcctggagtaaaactgtagagtatgtgtttactggtata
tatacctttgaagcaacaatcaaagttttgtcccgaggcttctgcatcggacctttcaca
ttcctccgtgatccatggaactggcttgatttcatggtgatcagcatggcgtacgtcaca
gagtttgtagaccttggtaatgtgtcagcactgaggacatttcgtgtgcttcgagctctc
aaaaccatcacagttattcctggtttgaaaaccattgtcggggctttgattcagtctgtc
aagaagatggtagatgtcatggttttgactctttttgcactggctgtatttgccctcatt
ggcctgcagctgttcatgggaaatctacgccacaagtgcatccgttggcccattcccaac
agcaccatgtttgatgattacaactccaccatggtcaatgacaccaccctcaatgtcaca
gatactttcgatttcaaagcatacatagaaaatgaagaaaaccaatactttctggaagga
agtttagatgctttgatatgtggtaacagctctgatgctgggaggtgcccagaaggttac
acatgtatgaaggctggacgaaacccaaactatggctacaccagctatgacaactttggc
tgggcatttctcgccctcttcagactcatgactcaagactattgggagaatctcttccag
ttgacccttcgtgccgctgggaaaacctacatgatcttctttgttgtggtcatattcctg
ggctctttctacctcatcaacctgattttggctgtggttgctatggcatacgatgaacaa
aacgaagccaccatggctgaagctcgtgagaaagaagaggagtttcaaagattacttgag
caactcaagaaccaagagcaagagttacaggcaggcagtaaagcatctttagccagcctg
gtgacacaaagtcaagggtcaaacaggacaggttccctgcacagtcttggtggtgatgat
gttataaatgactgtaacggacgaatattgcctcgcctcattgtcaacagagcctcctct
aacaaagagttatcagctgaagaagaccacaggtccttgaactccaaacacagcatgcag
tacctggaccagcccaaactctccaagagaacagctagtgctatcagtgttctcactgca
acgatggaggtgttggaagattctcagaggccttgtccccctggctggtataagttcgct
gatattttcttaaaatgggactgctgcactccctggatcatatttaagaaatgggttcat
tttgtagtgatggacccatttgtggatttaggtatcaccatctgcattgtgctcaacaca
cttttcatggccatggagcactaccccatgagtccggattttgaacatgttctctcagtg
ggaaacttggtatttacaggaatcttcacagctgaaatggtgttcaagctcattgccatg
gacccctactactacttccaggtgggctggaacatttttgacagtatcattgtcacactc
agcctggtagagttgggactggccaatgttcaaggattgtccgttctcaggtcctttcgt
ttgctacgtgtcttcaaactggctaaatcttggcccacccttagcatgctgatcaagatc
atcggcaactcagtaggtgccctggggaacctaacacttgtcctggccatcatcgtcttc
atcttcgccgtggtgggcatgcagctttttggcaagagctacaaagactgcgtctgtaag
atttctgaggactgcgagctgccccgctggcacatgaacgacttcttccactctttcctc
attgtctttcggatcttgtgtggagagtggatcgagaccatgtgggtctgcatggaggtg
gcgggagcgagcatgtgcctgatagtcttcatgatggtcatggtcattggaaaccttgtg
gtactgaacctgttcctggctctgctgctcagctccttcagcggggataacctgtctgga
ggggatgatgatggtgagatgaacaaccttcagatcgccattggtcgcatcaccaggggt
atagattggctcaaatccttcatcgccagaaagttgcgccagattctaggaaagaaacct
cctgacaataatgaaggaggaagggaaggagacatagaactgtgtgctattaatcacctg
gatgaggggaaaatggcagatggcttgaccaactgtttgcctccaacactgactgtacct
attgctcgttgtgagtctgatgttgaagatgatgaggactctgatgaatcttctgatgag
ggggatggaaaggctgctctcgatgatgatgactcatcagtttgtagcacagtggactac
cagcctccagaacctgagcctgagcctgaagaggaagaagaaccagagcctgaagagcca
gagtcctgtttcacagagggttgtgtcaagcgatttacatttttgaacgtagacatcaca
gaaggatgggggaaaaagtggtggaaccttcgaagaacatgcttcaccatcgttgagcat
gactactttgaaaccttcatcatctttatgatccttcttagtagtggagctctggctttt
gaggatatcaacatagagcgccgcagagtgatcaagattatcctggagtatgctgataaa
gtctttacatacattttcatagtagagatgttactaaagtgggtggcatatggtttcaag
acttacttcactaatgcgtggtgctggctggacttcctcattgtggatgtgtcactagtc
agtttaacagctaatttattgggatattctgagctgggagcaatcaaatctctccgaaca
ctcagggctcttcgaccacttcgagccctgtcaagatttgaaggaatgagggtggtagtg
aatgcactggttggtgccattccctctattttcaatgtgctgctggtgtgtctgatattc
tggctcatcttcagcattatgggagtcaatctgtttgctggaaagttctaccactgcata
aacaccaccacagaggaacgcttccccatggatgtggtcaacaacaagagcgactgtatg
gccctgatgcacaccaatgaggcacgctgggtcaatgtgaaggtcaactatgacaacgtg
ggactcggctacctctctctactgcaaattgctacgtttaaaggctggatggatatcatg
tacgctgcagtggactctagagaggtggaagagcagccgtcatatgagatcaacctttac
atgtacctatattttgttattttcatcatttttggatcctttttcactctcaacctcttc
attggtgtcatcattgacaatttcaatcagcagaaggctaagtttggagggaaagacatt
ttcatgacagaggagcaaaaaaagtactacaatgccatgaagaagttgggttccaagaaa
cctccaaaacctattcctaggccatcgaatgcgatccagggtgtggtgtttgacttcata
acaaaacagttctttgacatctttatcatggtgcttatctgcctcaatatggtgaccatg
atgatagagacggatgaccagagtgctgagaaagaggatatcttgtacaagatcaatttg
ttcttcatcatcatcttcacaggagaatgcgtacttaagatgtttgcgctcagacattac
tttttcactattggctggaacgtctttgattttgttgtggtcattctttctatagcaggt
ctgatgttatcagatatcattgagaagtactttgtgtctcccaccttgttccgtgtgatc
cggctcgccagaatcggccgtgtgctacgtctcatcagaggggcaaaaggcattaggact
cttttatttgccttaatgatgtcacttcctgccctcttcaacatcggactgcttctgttc
ctcattatgttcatcttttcaatctttggcatgtctaattttgcctatgtaaaaaagcag
gcaggcatcgacgatatcttcaactttgaaacctttggcggcagcatcatctgcctgttt
gagatcacaacctcggcaggctgggatgggcttctgctgcctattctgaacagcggccct
ccagactgtgaccctgacatagagaaccctggtacagacgttcgggggaactgcgggaat
cctggcatgggtatcatgtttttctgcagttacatcatcatgtcattcctggtggtcgtg
aacatgtacattgctatcattcttgagaacttcaacgttgctcaagaggagagtggagac
ccgctctgtgaggatgactttacgatgtttgacgagacgtgggaaaagtttgacattgat
ggaacactgtttattgagtacagccgcttgtttgacttcgtcgatgctttgcaggagcct
ttacgaattgccaaacccaaccgccttaaactaatcaccatggatctacccattgtaacc
ggtgacaaaatccactgtctggatattcttttggcagttacccgtgaggttcttggtgac
acgattgagatggctgccatgaaggagagcattgaagccaaattcacaatgagcaatcct
acatctgcctcctttgaaccaatcaccaccactctcaggaggaaagaggaagtgcatgca
gccgttgcggttcaacgaacataccgtagacatctcctcaaacgtgctatccggtatgca
tgcttcatgcatcgttcaaagaggaaagtcaggggtcaaaacgatgaagaacctcctgaa
accgaagggttaattgcaaggaaaatggatgccctttatggcagcaatccagaacttgcc
atggctcttgagctgcaggctaggccgctgccacctaatgcacagccgcccaagcccacc
tcggtcatgcagcaccgagtatccatagcctaccctcgtccacagggacaactcacactt
ccagtggagcttacaagtgaggcgatcctccagtctgcacccatgatgcatggcctctgc
agtttagagaatgcaacaataaaagagtcagtagtataa
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