Carassius auratus (goldfish): 113112840
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Entry
113112840 CDS
T07313
Name
(RefSeq) guanine nucleotide exchange C9orf72-like isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113112840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113112840
Membrane trafficking [BR:
caua04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
113112840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
113112840
NCBI-ProteinID:
XP_026134527
Ensembl:
ENSCARG00000010145
UniProt:
A0A6P6QME8
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All DBs
Position
13:15781929..15787645
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AA seq
462 aa
AA seq
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MSAAGPPQSPSVDKTEVLVEDWCPVLAATFAYWDNILGPRVQHIWAPKGQGLSLLSDGEV
TFLANHTLNGEILRSAESGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQS
ELSFYLPLHSVCVERLKHIIRKGRICMQKGYNIISVLSSEIVPIMELLTSMKKHSVPEEV
DLKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSMVVGSNPDKVNKIVLTLCLFLTPAE
RKCSRLCHPEGSFKYDTGLFVQGLLKDSTGSFVLPYRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYHQRRYMRAELSALWKAASEDDISSDNLLNAQDSYTPDLNIFQDVMHKDTLVKS
FIDEVFLLKPGLSLRSVYLSHFLLLLHRKSLTLLRYIEDETQKGKKPFRSLRNLKTDLDL
MMEGDLNIIMAMAEKLRAGLHSFVFGKSFLTSVQERDLLINF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagccggtccgccgcagtctcctagtgtggataagactgaagtgctggtcgag
gactggtgtcccgtgctggctgcaaccttcgcttactgggacaacatcctgggacctcgt
gtacagcacatctgggcccccaaaggtcaggggttgtcgctgctgagtgatggcgaggtc
acatttctggccaatcacacgctgaacggcgagatcttgcgaagtgctgagagtggcgca
gtggacgtgaagttcttcgtcctggcggaaaagggagtcatcatagtctcgctgattttc
gacggagaactcaagggtgataagaacacctgcgcgctgtcaatcatcctgccgcagtca
gagctaagcttttacctgccactgcacagcgtgtgtgtggagagactcaagcacatcatc
cgcaagggacgcatctgcatgcagaagggttacaacataatctcggtgttatcatctgag
attgttcccataatggagctccttacctccatgaagaaacacagtgtacctgaggaagtg
gatttaaaggacactgtgctcaatgatgatgatatcggagacagctgtcacgaagacttt
ttacacaaggctatcagctctcatcttcagacgtgcggctgctccatggtggttggcagc
aatcctgacaaagtcaataagatcgtgctcacgctatgcctcttcctcactccagcggag
agaaagtgctctcgactgtgtcaccccgaaggctcgtttaaatatgacactggcctcttt
gttcaaggcctccttaaggactccacaggcagctttgtgttgccttatcggcaggtgctt
tactccccataccccaccacccacatcgatgtggacattaacacggtcaagcagatgcca
ccctgccacgagcacacgtaccatcagcggcgctacatgcgagctgagctcagtgccctc
tggaaggccgccagcgaggatgacatcagttctgacaacctcctcaatgcccaggactcc
tacactccagacttgaatatatttcaggacgtcatgcacaaagacacacttgtgaagtcc
ttcattgatgaggtgtttctgttgaaaccaggtctgtctctgcggagtgtgtatttgtcc
cacttccttctcctgctgcacaggaagtccctgacactgctcagatatattgaggatgag
acgcagaagggcaaaaaacctttcagatctctacgcaacctgaaaacggatttggactta
atgatggagggtgacttgaatatcatcatggcgatggcggagaagctgcgggcaggcctt
cactcctttgtttttggaaagtctttccttaccagtgtgcaggagcgtgacctcctcatt
aacttctga
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