Carassius auratus (goldfish): 113113110
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Entry
113113110 CDS
T07313
Name
(RefSeq) slit homolog 1 protein-like
KO
K06838
slit 1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113113110
Glycosaminoglycan binding proteins [BR:
caua00536
]
Heparan sulfate / Heparin
Axon guidance molecules
113113110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
hEGF
LRRCT
EGF_TEN
LRRNT
LRR_9
LRR_14
LRR_1
EGF_Teneurin
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
113113110
NCBI-ProteinID:
XP_026135067
Ensembl:
ENSCARG00000046849
UniProt:
A0A6P6QNZ8
LinkDB
All DBs
Position
13:25392367..25450295
Genome browser
AA seq
1526 aa
AA seq
DB search
MPVRGGHSVGRLVEVCIQILLLCKAATACPALCTCSGTTVDCHGLKLKTMPRNIPRNTER
LELNGNNLTRINRNDFSGLKYLRVLQLMENQIGTVERGAFDDMRELERLRLNRNQLHQLP
ELLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFRALRGLEV
LTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLNCDCNLAWLSQWLRERPTIGLFTQCSTP
APLRGLNVAEVQKHEFSCSGQSEDAAVQSCSFTAGSCPAVCTCNNNIVDCRGKGLMAIPA
NLPDSMAEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY
GNKITDLPKGVFDGLYALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTF
TSLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCTSPRRLANKRIGQIKSKKF
RCSAKEQYVIPGTEDARLSYDCNNDPVCPAKCRCESNVVDCSNLRLNRIPEHIPASTTEL
RLNNNEITTIEATGVFKTLSHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDSAH
SGMFRGLDGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNMLTTITPGAFDTLQSLST
LNLLANPFNCNCHLAWLSSWLRNRKIVTGNPRCQRPAFLKEIPLQDVALPDFRCQEDQEE
ASCTPPVQCPTECTCLESMVRCSNKHLHVLPKGIPRNVTELYLDGNQFSVVPKELSNFKN
LQLVDLSNNKISTLTNSSFANMSQLTTLILSYNALRCIPTLAFGGLRSLRLLSLHGNDIS
ELPDGIFNDAASLSHLAIGANPLHCDCRLRWLSDWVKTGYKEPGIARCVGPHGMEGKLLL
TTPAKRFECQGEVDAAILAKCNPCMSKPCLNHGSCEADHTDGYRCRCSDGFKGKNCETPL
NACIGEPCMNGGTCHMSGEEDEGFSCSCAAGFEGPTCDIDIDECKDNDCQNGATCIDGIN
NYTCLCAPFYTGEMCDDMEDMCASTRSPCKHQSTCFITVTGPKCICAPGYVGEDCSMNYD
DCKDHRCQNGAQCVDEVNGYSCVCPKAYSGQLCEVPSTPRSLCELADCQNNAPCVERGGH
ALCQCLEGFGGPRCEKLVSVNFVDRDSYLLLSDLKNWPQANITLQVSTAEDNGILLYNGD
NDHIAVELHEGHVKVSYDPGSQPSHAIYSTETINDGQFHTVELVTFDQMVNLSIDGGIPT
TMDSFGKVQPLRGEAPLYVGGMPVSVHPIAPRVWQIQNSSSFHGCIQNLYINNELQDFTK
TQMKPGVVPGCEPCRKIYCLHGICQPNTTIGPVCHCQPGWSGQHCDQPSANPCLGSKCVH
GRCIPMDMQSYRCECQEGFHGALCNQQEELFNPCRKLQCKHGHCQISDTGDAYCHCETGY
SGEHCDKESECHGEPVRDFYQVQRGYAICQTTRMVSWVECSGSCDTGSCCASQRMKRRKY
TFECSDGTSFSEEVEKTIKCGCVGCM
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgagaggaggacactctgtaggcagactggtggaggtgtgtatccagatactg
ctgctgtgtaaggctgccacggcatgccctgcgctctgcacttgcagcggcaccacagtg
gactgccatgggctgaagctcaaaaccatgcccaggaacataccccgaaacacagagagg
ctggaattgaatggaaacaacctcacacgcatcaacagaaatgacttttctggactcaag
tatcttcgagttttgcagctgatggagaaccagattgggacggtggagcgcggtgcgttt
gatgacatgagagagctggagagactacgtctgaacagaaaccagcttcaccagcttcca
gagcttctgttccagaagaacgcggctctctccagactagacttgagtgagaacttcatc
caggcgattccccgaaaggccttcagaggagcgactgacatcaagaacctgcagttagac
aagaatcacatcagctgcatcgaggacggagctttccgcgccttacgtggacttgaagtt
ttaaccctgaacaacaacaacatcagcagcatcccagtgtccagcttcaaccacatgccc
aagctcaggaccttccgtttacattccaacaacctgaactgcgactgtaatctggcctgg
ttgtcccagtggctgcgcgagcggcccaccatcggtctgttcacccagtgcagcactcca
gctccgcttcgaggacttaatgtagccgaggtccagaaacatgaattcagctgttcaggt
cagtctgaagacgctgctgttcagtcgtgtagtttcaccgccggctcgtgtccggccgtc
tgtacctgcaataataatattgtggactgcagagggaaaggactgatggcgataccggca
aacctgcccgacagcatggcagagatacgactggaacagaacagcatcaaatccatccct
cctggagcgttttctccttataagaaactgcgcagaatagatctcagcaacaaccagatt
tctgagctcgctcctgacgccttccagggcctgcgctcgctgaactccctggttctgtac
ggaaacaagatcactgatctgcccaaaggagtgttcgacggactctacgccctccagctg
ctccttttgaacgcaaacaagatccactgtcttcgcgccaacacctttcaggacctgcag
aatctctcgctgctttctttatatgacaacaaaatccagacgttggccaagggcacgttc
acctcgctgcgtgccatccagacccttcatttggctcagaatcccttcatctgtgactgt
aatctgaagtggttggctgattacctgcgctctaaccccatcgagaccagtggtgcccgc
tgcaccagccctcgccggctcgccaacaaacgcatcggccagatcaagagcaagaagttc
cgctgctccgccaaagagcagtacgtcatcccaggaacggaggacgccaggctgagctac
gactgtaataatgacccagtctgtccagccaaatgccgctgcgagtcaaatgtagtggac
tgctccaatctacggctgaaccgcatccctgaacacatcccagcatccaccaccgaactg
cgtctcaacaataatgagatcacgacaatagaagccacaggggttttcaagacgctttct
cacctgaagaaaataaacctgagcaacaataagatctcagagatcgaggatggggcattt
gagggggcatcttcggtcaatgagctgcacctgacggcgaaccagctggattcggcgcac
agcgggatgttcagaggactggatggcctgcgcatgctaatgctgcgcaacaatcgcatc
agctgcattcacaacaacagcttcacaggcttgcacaacgtccgtctgctatcgctctac
gacaacatgctgaccaccatcacacccggagccttcgacacgctgcaaagcctctcaacc
ctaaacctgctggccaacccattcaactgtaactgccatctggcatggctgagcagctgg
ctgagaaaccgtaagattgtcacgggaaacccgcgctgccagcggccagcgttcctcaaa
gagattcccctgcaggatgtagcgttaccagacttccgctgccaagaggatcaagaagag
gcgagctgcacgccgcccgtccagtgtcctaccgagtgtacttgtctggagtccatggtc
cgctgtagcaacaaacacctgcatgtcttacccaaaggaatcccgcgcaacgtcactgag
ctgtatctggatggaaaccagttcagtgtggtgccgaaggagctgtccaacttcaaaaac
ctgcagctagtagacctgagtaacaacaaaatcagcacgttgaccaactcttcgtttgcc
aacatgagtcagctgacgaccctgatcctgagctataacgctcttcgctgtatcccgact
ctggcctttggaggtcttcggtctctccgcttgttgtctctgcatggtaatgacatctca
gagctgcctgatgggatcttcaacgacgctgcatcgctgtcacatctagcaattggtgcg
aaccctttgcactgtgactgccgtctgcgctggctctctgactgggtgaaaactggctac
aaggagcctggcatcgcacgctgtgttggaccgcacggcatggaggggaaattactgctc
accaccccggccaagaggttcgagtgtcaaggtgaagtggacgctgctatactagccaag
tgtaacccgtgcatgtccaagccctgtctgaaccacggcagctgtgaggccgatcacacg
gacggctacaggtgtcgctgttcagacgggtttaagggcaagaactgtgagacgccgctc
aacgcttgcatcggtgagccctgtatgaacggaggaacatgccacatgtctggagaagag
gatgaaggctttagctgttcgtgtgctgcaggctttgaaggccccacatgtgacattgat
attgacgagtgtaaagacaacgactgtcagaacggagcaacctgcatagatgggatcaac
aattacacctgtttatgtgcccctttttacacaggggagatgtgtgacgatatggaggac
atgtgtgcttctacacgcagtccctgcaagcaccagtccacctgcttcatcacagtcact
ggcccaaagtgtatatgcgcacctggttatgtgggtgaggactgcagtatgaactatgac
gattgcaaggaccacaggtgtcagaatggggcacagtgtgtggacgaggttaatggatac
tcctgcgtttgccccaaggcctacagtggacagctttgtgaagtcccatctactccgcgc
tctctctgcgaattggctgactgtcaaaacaatgccccctgtgtggagcgggggggccat
gcactgtgtcagtgcctggaagggtttggtggaccacgctgtgaaaagttggtcagtgtc
aactttgtggaccgagactcctacctgctactgagtgacctgaagaactggcctcaggct
aacatcacgctacaggtgtccacagcagaagataatggaattcttctgtacaatggggac
aatgaccacattgctgtggagcttcatgaaggtcatgttaaagtcagctatgaccctggc
agccaaccaagtcatgcaatctacagcactgagaccatcaatgatggtcagttccacact
gtagaactggtgacctttgaccagatggtgaacctttccatagatggtggtatcccaacc
accatggacagctttggtaaagtgcagcccttgagaggagaagctccactgtatgtggga
ggcatgccggtcagtgtccaccccatagctccccgcgtctggcagatccaaaacagctcc
agttttcacggctgtattcagaacctttacatcaataatgagctacaagactttaccaaa
acccagatgaaacctggtgtggtgcccggatgtgagccctgccgaaagatatactgcctc
catggtatttgccaacccaacaccaccataggccctgtatgccactgccagcccggatgg
agtgggcaacactgtgaccagccttcggcgaacccctgcctgggcagcaagtgtgttcat
gggagatgtattccaatggacatgcagtcgtaccgctgtgagtgccaggagggttttcat
ggtgccctgtgcaaccagcaggaagagctcttcaatccatgcagaaagcttcaatgcaaa
catggtcactgtcagatatctgacacaggagatgcctactgtcattgcgagacgggctat
agtggagaacattgtgacaaagagtctgagtgccatggggagccagtgcgggacttctac
caggtccagcgtggttacgccatctgtcagaccacacgcatggtgtcgtgggtggagtgc
agcggttcctgcgacaccggctcctgctgcgccagtcaaaggatgaagcgcaggaaatac
acttttgagtgcagcgatggcacatccttcagcgaggaggttgaaaagaccatcaagtgt
ggctgtgtggggtgcatgtag
DBGET
integrated database retrieval system