KEGG   Carassius auratus (goldfish): 113113665
Entry
113113665         CDS       T07313                                 
Name
(RefSeq) lysine-specific demethylase 2A-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    113113665
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:caua03000]
    113113665
   04121 Ubiquitin system [BR:caua04121]
    113113665
   03036 Chromosome and associated proteins [BR:caua03036]
    113113665
Enzymes [BR:caua01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     113113665
Transcription factors [BR:caua03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    113113665
Ubiquitin system [BR:caua04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     113113665
Chromosome and associated proteins [BR:caua03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    113113665
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     113113665
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like JmjC F-box Cupin_8 LRR_6 Rubredoxin
Other DBs
NCBI-GeneID: 113113665
NCBI-ProteinID: XP_026135839
Ensembl: ENSCARG00000015168
UniProt: A0A6P6QQP8
LinkDB
Position
14:12750587..12762501
AA seq 1279 aa
MEGESSRYSKRLRTGTRRRYQDDGISDDEIEGKRSFDIEEKLQSDRYNSDLVKIMDGKDF
TLEYIQREGLRDPIIFKKADGLGIKMPDPDFSVSDVKLFVGSRRMVDVMDVTTQKGIEMS
MGQWRRYYETPASEREKLYNVISLEFSHTKLENLVKRPTSVDMIDWVDNMWPRHLKESQR
DSTNAIIDMQYPKVQKYCLMSVEGCFTDFHIDFGGTSVWYHILRGRKVFWLIPPTPQNLE
LYENWVLSGKQGDIFLGDKARMCQRIELKQGYTFMIPSGWIHAVYTPMDTLVFGGNFLHS
FNIPMQLNIYNIEDRTRVPAKFRYPFYFEMCWYVLERYLYCLTNTSHLTPEFQKHSLGIG
LKKEDVIKQAGFNDQGETVVKEEEEEEEEEEVKEEPEEEAASPTRPGVKVHLTPLELEGL
WELLHKLEDLPAHKKCVPAGIRNAPALLSDIRKLLEEHANDNPKLSYTGKPIVKWPKRPS
WYEPPPPLSLLYRPRAPGSAPVLPPVPRPVKPSSSISALRRRRVRCKRCEACLRTECGDC
NYCRDMRKFGGPGRLKKSCVLRQCLAPALPLTAVCAICKEGYQESIDPESVQTLMECSEC
AQITHPECIKVHVPGEGIINKDLPSCWECPKCVQGKKTESSSSSDEETDSSVSNGSRLSG
PPAKRAYREGIGVGGLRIGRRGRPPLSLSSPPLTRSRRQPPPSQRLLLQHQQNRRRAGAL
ELQLRKRIKLERNKIIQSTRSSVSLSPKLLRQRSLERGGVVRAGPGRSVSRGRGVSSFRG
RGVRLRGGGRGGGLRERMEMEVERDDSVEEEQEERKENGQYNGKENRPQRRGAKAGEDEN
GESHRNGESEGSSEGGEATPSDTSVVLNDDVRGQGSCVTVTLQPSRGRRDPSAIVPKMEA
NLSSRSLPQNPKTLLRPPLRNGAPHSDGPRSPADRLHVNKSHALSSSPHTLTRSASKHSH
MVRSLRSNFKDSPHRLTQERVGKKTRSEKAKSSDSCSSSTLRPSAEQNGGNEPGWEREVW
VSVFRYLTRAELCVCMAVCKSWYKWGCDKRLWTRISLSRCRSISPQALTGIIKRQPVTLD
LSSANISKKQLSWLINRLPGLKDLVLSGCNWASVCALSSPSCPLLRSLDLSWADGVKDAQ
IRELLNPPGSDNRSQMKHMQCLWLCGLEVTEATLRLIIRHMPLLTRLELSHCPITDGALN
LLSAVGSSTRNTLTHLNLAGCSRLTDRCLVYLRRLSCLSVLDLRGCKGVSRQACESFISE
LSVNALYCLSDDKLIQRIS
NT seq 3840 nt   +upstreamnt  +downstreamnt
atggaaggggagagttcccgttatagcaaacgcctgcggactggcactcggcggcgttac
caagatgatggcatttcagacgatgaaatcgaagggaagagatccttcgacattgaagag
aaactccaaagtgaccgatacaactcggatctggtcaaaattatggacgggaaagacttc
accttggagtacatccaacgggagggactccgggaccccattatcttcaagaaagcagat
ggtcttggcataaagatgcctgacccagacttcagtgtcagtgatgtgaaattgtttgtg
ggcagtcgtaggatggtggatgtgatggatgtgaccactcaaaaaggcattgagatgtca
atggggcagtggaggagatactatgagaccccggcatcagaacgtgaaaaactctacaat
gtgatcagtctggagttcagtcacacaaaactagaaaatctagtcaagagacctacctcg
gttgatatgattgactgggtggacaacatgtggccgcggcatcttaaagagagtcagaga
gactccaccaatgccattatagacatgcagtaccctaaagtacagaagtattgtctgatg
agtgtcgagggatgcttcacagatttccacatagactttggcggcacatcggtctggtac
cacatcctcaggggaaggaaggtgttctggctgatcccgcccacacctcagaacctggag
ctctatgagaactgggtgttgtcagggaagcagggtgacatctttctcggcgataaagcc
aggatgtgccaacggattgaactgaagcaaggctacacattcatgatcccctcagggtgg
atccatgcagtttacactccgatggatacgctggtgtttgggggaaactttctgcacagc
tttaacattcccatgcagctcaacatttataacattgaggaccgcacacgggtccctgct
aagttccgctaccctttctactttgagatgtgctggtatgtgttggagcgttacttgtac
tgtctgaccaacacgtctcacctcacacctgagttccagaagcactcactgggcattggg
ctaaagaaggaggatgtgattaaacaagcaggctttaatgatcaaggagaaactgtagtg
aaagaggaggaggaggaggaggaggaggaggaggtgaaagaggagccggaggaagaggca
gcatcccctactcgtccaggggtgaaagttcacctgacacccttagagctggaagggctt
tgggaactactgcacaagttggaggacttgccagcacacaagaaatgtgttccagcaggc
atcagaaacgcccctgcactactcagtgacatacggaagctgctagaggaacatgccaat
gataaccccaaactgtcttacactggaaaaccaatcgtcaaatggcccaaaaggccctcg
tggtatgagccgcctccgcctctgtctctgctgtaccgcccgcgtgctcccggttcagcc
cccgtgctgccaccggttcctcgacccgtgaagccgtcttcctccatctctgctctgaga
cgcagacgcgttcgctgcaaacgctgcgaggcctgtctgcgcaccgagtgtggcgactgt
aactactgtcgggacatgaggaagtttggagggccgggcagactcaagaagagctgtgtt
ctccgtcagtgtcttgcaccggcgctacctcttactgcagtgtgtgccatatgtaaggaa
ggctatcaggagtctatagaccccgagtccgtccaaacgctcatggagtgctccgaatgc
gctcagatcactcatccagaatgtataaaggtacatgtgcccggtgagggtattattaat
aaggaccttcccagttgttgggaatgtccaaaatgtgtccagggcaaaaaaaccgagtct
tccagtagtagtgatgaggagacagacagcagcgtgtccaacggcagtcgcttgtctggt
cctccagctaagcgggcatacagagaggggattggggtggggggtctgcgtataggacgc
agaggtcgcccgcccctctccctctcctccccgcctctgacccgctccagacgacagccg
cccccttcccagagactcctgctgcagcaccagcagaacaggaggagagcaggagcgctg
gagctacagctcaggaaaaggataaaattagaacggaacaaaatcatccagtcgacccgt
tcgtctgtctctctttctccaaagctcctgcgtcagcggagtctggagagagggggcgta
gtcagagcgggacccggacggagcgtttcacgtggccgaggggtgtcctcctttcgcgga
agaggggtacgactccgaggcggtggccgagggggaggcctgagagaaagaatggagatg
gaggttgaaagagatgactccgtggaagaagaacaggaggagaggaaagagaacggacag
tataatggtaaagagaaccgtcctcagagacgaggagctaaagctggtgaagacgagaat
ggagaaagccatcgaaacggagagagcgaggggagcagtgagggaggagaggccactcca
tctgacacttctgtggtgctaaatgatgatgtcagaggccaggggtcctgcgtcacagtg
acgttacagccatcgaggggtaggcgcgaccctagcgccattgttcccaaaatggaagcc
aacttgtcttctagaagccttccgcaaaaccccaaaaccctgctccgtcccccactgcga
aacggtgcccctcactcagacggtcctcgttcgcctgcggacagattgcacgtaaacaaa
tcacatgctctttcatcatcaccgcacactctgaccagaagcgcatccaaacactcacac
atggtgcggagtctgagatcaaacttcaaagattcccctcaccggctgactcaggagcga
gttgggaaaaagactcgatcggaaaaggcgaagtcctcagactcttgttccagttccacc
ctgcggccgtcagcggagcagaacggagggaacgagcccggctgggagagagaggtgtgg
gtgtccgtgttccgctacttgactcgtgcagagctgtgcgtctgcatggctgtttgcaag
agttggtacaaatggggctgtgacaagcgtttatggacgcggatcagtctgagccgctgc
cgctctataagtcctcaggccctcacgggcatcatcaaacggcagcctgtcacactggac
ctctcctcggccaacatctccaagaagcagctcagctggctcatcaaccgcctgccaggc
cttaaagacctggtgctatcagggtgtaattgggcgtcagtctgcgcactgagctctcca
agctgtcctttactgcgctctttagacctgagctgggccgatggtgtcaaagatgcacaa
atcagggagctgctgaacccaccaggcagcgacaaccgttcccagatgaagcacatgcag
tgcttgtggctgtgcggtctggaggtgaccgaagccacgctgaggctgatcatcagacac
atgcctctgctcactcgcctcgagctctcgcactgtcccatcacagatggtgctctcaac
ctcctcagcgccgtgggctcctccacacgcaacacactcacacacctcaacttagcaggt
tgtagccgcctgacagaccggtgtcttgtgtacctgcggcgcctgtcctgtctctccgta
ctggacctgcgcggctgcaaaggggtctcgcgacaggcgtgcgaaagctttatctccgag
ctgtctgtcaatgccctctactgcctatcagatgacaagctcatccagaggatatcgtaa

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