Carassius auratus (goldfish): 113116947
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Entry
113116947 CDS
T07313
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113116947
Membrane trafficking [BR:
caua04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113116947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
113116947
NCBI-ProteinID:
XP_026141042
Ensembl:
ENSCARG00000003230
UniProt:
A0A6P6R6B5
LinkDB
All DBs
Position
17:complement(1594335..1633276)
Genome browser
AA seq
1774 aa
AA seq
DB search
MKRSKHRASKDDGKDEPAILETEDMRMPDPDTISLASVTAVTTNVSNKRSKPDIKIEPSA
GRPVDFQVNVTVIEARQLVGLNMDPVVCVEIGDEKKYTSMKESTNCPYYNEYFVFDFHVP
PDVLFDKILKVSVIHSKNLLRSGTLVGSFKLDVGTVYTQPEHQFFHKWATLCDPDDITAG
CKGYVKCDIAVVAKGDTIKTPHKANETDEDDIESNLLLPEDVPAERQWARFYLKIYRAEG
LPKMNTSIMANVKKAFIGENKDLVDPYIQVQFAGQKGKTSIQKSSYEPIWNEQIVFTEQF
PPLCRRMKVQLRDSDKVNDVAIGTHFIDLQKIANDGDKGFLPTLGPAWANMYGSTRSYTL
MDEYQDLNEGLGEGVSFRARLLISLSVEILDTSSPDVMSSTEVQVEGIPNIPDNATGKLE
EFFLFGCFLEATMIDRKIGDKPINFEVTIGNYGSEVDTPTKPKTKNKKGGDGDDEESELI
HGSSDEEVDDSGDMTSVSTTPPMKPVITDRNYFHLPYFERKPCIYIKSWWQDQRRRLYNA
NIIDRIADKLEDGLNDVQEIIKTEKAYPERRLRGVLEELSNGCSTFVTLANNDQNQAGKT
KLDRERLKLCMQELENMGQQAKNMRSQVKKSNVKDKIKLAQNFLHKLRFLSDEPQHSVPD
IYIWMISNNKRIAYARVPSKDILFSSVDEETGKDCGKVQTIFFKLPGKKSFGPAGWTVQA
KTELYLWLGLNKQRKDYLNGLPNGFEENKAVKVPGIHSSPPISLIYTMKQIFQLRVHLYQ
ARSLFAADSTGLSDPFARVFFSTHSQVTEVLNETLCPTWDQLLVFDNVELYGEAGELRDD
PPIIVIEIYDQDTVGKADFMGRTFAKPLTKMSDEYYGPPRFPPQLEYYQIYRGNCTAGEM
LAAFELLQIGPAGKADLPPIDGPSDFDRGPILPVPIGIRPVLSKYRIEVLFWGLRDLKRV
NLAQVDRPRVDIECAGKGVQSALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVD
CRAFGRYTLVGSNAVTSLRKFIYRPSDKSVNSWSAMEEVVIHTEPEPVVKKTETVVKLDS
ASDAVVKIDMPDDEKGGKGKKKRKKGEEAEEEELDESMLDWWSKYFASIETLTEIIKAQE
AEAEEKEDFESGEGTRKKRGKGNKNKAMPAQVPEKKHKIEELKMYNRELEYEFDTFEDWL
HTFNLYRGKCSDDADVEQNAADEDRLIGKFKGSMCIYKVQALEDVSREMSFDANMGMFQN
IPHNDPVNVLVRVYVIRATELHPADINGKADPYISIKLGKTEIKDKENYISKQLNPVFGK
SFDIEATLPMDSTLTVSIYDWDLVGTDDLIGETKIDLENRYYSKHRATCGLSASYAIHGY
NVWRDPMKPTQILAKLCKDGKMDPPQYGPGGKVKVANRVYTGLTEIEDENGLKKQTDEHL
ALAVLNRWEDMPRIGCKLVPEHVETRRLLNPDKPGMEQGRIELWVDMFPKDMPAPGPAVD
ISPRKPKKFELRVIVWNTDEVVLEDDDIFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSL
TGEGNFNWRFIYPFDYLQAEEKIVISKKESMFSWDETEYKIPARLNLQVWDADHFSADDF
LGAIELDLNRFPRGAKTAKQCSIDMVINEQDMPMVNIFKQKRIKGWWPFVARDENDELEI
TGKVEAELHLLTGEEAEKSPVGEGRNEPEPLEKPNRPDTTFLWFLIPLKAVRHLVCNQYK
WLVIKIVLVLLLLAMLGLFLYSMPGYMVKKLLGA
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaagcaagcatcgagcctccaaggatgatggcaaagatgagccggccattctg
gagacggaggatatgaggatgccagaccctgacaccatctcactcgcatcagtcactgcc
gtcacaaccaatgtctccaataaaagatcaaagcctgacatcaagattgagcctagtgct
ggaagaccagtggattttcaagtcaatgtcactgttatagaggccagacagctggtgggt
ctgaacatggatccagtggtgtgtgtagaaatcggtgatgaaaaaaaatatacctcaatg
aaggagtcgaccaactgcccttactacaatgagtacttcgtttttgacttccacgttcct
cctgatgtcctgtttgacaagatcctgaaagtttctgttatccattctaagaatcttttg
cgaagtggtacgctggtcgggagcttcaagcttgacgtgggcacagtttatacacaacct
gaacatcagtttttccacaaatgggccactttatgtgaccccgatgatatcactgctgga
tgcaaaggctatgtcaagtgtgacatcgcagttgtggcgaagggcgacactatcaaaact
ccccacaaagcaaatgagacagatgaggatgacattgagagtaatcttctgttgccggaa
gacgtcccggctgagcgtcaatgggcaagattctatttgaaaatctaccgagccgagggg
ttgcccaaaatgaacaccagcataatggcaaatgtcaaaaaagctttcattggagaaaat
aaggacttggttgatccgtacatccaagtacaatttgcagggcagaagggtaaaacttca
attcagaagagcagctatgagcctatctggaatgagcaaatagttttcactgagcagttt
ccaccactgtgccggagaatgaaagtccagctccgtgattcggataaagtgaacgatgtg
gccatcggaacgcacttcattgacctgcagaagattgctaatgatggagacaaaggcttt
cttccaactcttgggccggcttgggccaacatgtacgggtccacacgcagctacacgctc
atggacgagtaccaggacctgaatgaaggactaggggaaggggtgtctttcagggcccgg
ctgctgatcagtctgtctgtggagatactggacacctcctctcctgatgtaatgagctcc
actgaggtgcaggtggaggggatacccaacatcccagataatgccacaggaaaacttgaa
gagttctttctctttggatgtttcctcgaagccactatgattgacaggaagattggagac
aaacccatcaactttgaggttacaataggaaactatggcagtgaagtcgataccccaacc
aagccaaaaacaaagaataagaagggtggcgatggagatgacgaggagtctgagctcatt
cacgggtccagtgatgaggaggtggatgatagtggagatatgacatcagtttccaccact
cctccaatgaaaccagtcatcactgacagaaactatttccacctcccgtactttgagcgg
aagccctgcatttatatcaagagctggtggcaggaccaaagaagacgactttataatgct
aacatcattgacagaattgcagataaattggaagacgggttgaatgatgtgcaggagatc
attaaaacagagaaagcctatcctgagcgcagactcagaggagtcctggaggaactcagc
aatggctgcagtacctttgtaactttggcaaacaatgatcagaatcaggctgggaagact
aaactggaccgggagagactgaaattgtgcatgcaggaattggaaaacatgggccagcaa
gcaaagaatatgcgatcacaagtaaagaaaagtaatgttaaagacaaaataaaactggca
caaaacttcctccacaagctgagattcttgtctgatgagcctcagcatagtgttccagat
atttacatatggatgataagcaacaacaaacgcattgcatatgcccgcgttccctccaaa
gacatcctcttctcttctgtggatgaagaaaccggaaaggactgtggaaaagtccagacc
atctttttcaagctccctggtaagaaaagctttggacctgcaggctggaccgttcaggcc
aaaactgagctgtatctgtggctcggcttgaacaagcagcgtaaggactacttaaacggc
ctaccaaatggttttgaggagaacaaggcagtaaaagtgcctggcatacattcttcgccc
cctataagcctgatctacacaatgaagcagatcttccagctgagggttcacttgtaccag
gctcgcagtctgtttgcggctgacagcacaggcctgtcagacccttttgccagggtcttt
ttctccacccacagccaggtcacagaggtcctgaatgagactttgtgtcctacatgggat
cagctgctggtgtttgataatgtggagctctatggtgaggctggtgaactgagagatgat
cctcctataatcgtcatcgagatctatgatcaggacactgtcgggaaagccgatttcatg
ggcaggacatttgcaaaacctttaaccaagatgtcagacgagtattatgggccgccacgc
ttccctcctcagctggagtattaccagatctaccgggggaactgcactgcaggagaaatg
ctggcggcctttgaactgctgcagattggaccagctggaaaggccgacctgcccccaata
gatggcccttcagatttcgatcgtggtccaatcctgcctgttcctattggcataagacct
gtcttgagtaaataccgaattgaggttctcttctggggcctgagggacctgaagcgagtg
aatctggctcaagttgaccgtccccgcgtggacatcgagtgtgcagggaaaggtgttcag
tcagcgctgattcagaactacaagaaaaaccccaacttcagcactctggtcaagtggttt
gaagtggacctgccagaaaacgagctcctccaccctcctctgaacatccgtgtggtggac
tgccgggcatttggtcgttacacactagttggctctaatgccgtcacatctctacgcaag
ttcatttacaggccatcggacaagagtgtcaatagctggtctgccatggaggaggttgtg
atccacacagagccagaaccagttgtgaagaagactgagacagtggtcaaactcgactca
gcatctgatgccgtggttaagatcgatatgccagatgatgagaaaggtgggaaagggaaa
aagaagcgaaagaagggtgaagaggcggaagaggaggagctggatgaaagcatgctggac
tggtggtccaaatactttgcctccattgaaactctgacagagatcattaaagcacaagag
gcagaagctgaagaaaaggaagattttgagtctggagaagggaccaggaaaaagagagga
aaaggaaacaagaacaaagccatgcctgcacaagtaccagagaagaagcacaaaattgaa
gagctgaagatgtacaacagagagcttgaatatgagtttgacacctttgaagactggctt
cacacttttaacctttatcgaggcaagtgttcagatgatgctgacgttgagcagaatgca
gctgatgaagacagactgattggcaaattcaagggatccatgtgcatctacaaagtccaa
gcattggaagatgtgtccagagaaatgagctttgatgctaacatgggcatgttccagaac
atcccacacaacgaccccgttaacgtcctcgtccgagtctatgtcatccgggcaacagaa
ctgcatcctgcagacatcaatgggaaggccgacccgtatatctccatcaagctcgggaag
acagagatcaaggacaaagagaactacatctccaaacaactcaaccctgtgtttggaaag
tcttttgatattgaagcgacgctcccgatggattccaccctcaccgtgtccatctacgac
tgggatttggtgggaactgatgacctgattggggagacaaagattgacttggagaaccgt
tactacagcaagcacagggcaacatgtggtctcagcgccagctacgcaattcatggctat
aatgtgtggagggacccaatgaagccaacccaaatccttgccaaactctgcaaagatgga
aaaatggatccgccccagtacggcccagggggaaaagtcaaagtggcgaacagagtttac
acgggactgactgaaattgaagatgaaaatggactgaagaaacagacagatgagcacctg
gctcttgctgttctaaaccgctgggaagatatgccacggatcggctgcaaactcgtccca
gagcacgtggagacgagacgtctcctgaatccagataaacctgggatggagcaggggagg
attgagttgtgggtggacatgttcccgaaggatatgcctgcgcctggacccgctgtcgat
atttcaccaagaaagccaaagaagtttgagctcagggtgatcgtgtggaacacagacgaa
gtcgttctggaggacgatgacattttcacgggggaaaaatccagtgacatatttgttaga
ggatggctgaaaggtcaacaagaagacaagcaggacacagacgtccactatcactctttg
accggagagggcaatttcaactggcgcttcatttacccctttgactacctacaagccgaa
gagaaaatcgtcatctcaaagaaagagtccatgttttcttgggacgagacggagtataaa
attcctgctcgactgaatttgcaagtgtgggatgcggatcacttctctgcagatgacttc
ttgggtgcaattgaactagacctgaaccggtttcctcgtggtgcgaagacagccaagcag
tgctccattgatatggtgataaacgagcaagacatgcccatggtcaacatcttcaaacag
aagagaattaaaggctggtggccatttgtggcccgggatgaaaacgatgagctggaaatt
acaggaaaagtagaagcagagcttcacctgctgacaggtgaggaggctgagaagagtccc
gttggtgaaggacgcaatgaaccagagcctctggagaaaccaaaccgccccgacactaca
ttcctgtggttccttatcccgctaaaggcagtccgtcatctcgtctgcaaccagtacaag
tggctggtcatcaaaattgtgttggttctgctgttattagcgatgctgggcttgtttctg
tacagtatgccaggttacatggtgaaaaagcttctaggggcttga
DBGET
integrated database retrieval system