Carassius auratus (goldfish): 113117560
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Entry
113117560 CDS
T07313
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04620
Toll-like receptor signaling pathway
caua04621
NOD-like receptor signaling pathway
caua04622
RIG-I-like receptor signaling pathway
caua05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
113117560
04621 NOD-like receptor signaling pathway
113117560
04622 RIG-I-like receptor signaling pathway
113117560
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113117560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4_2
zf-C3HC4
EzrA
RING_XB3-XBAT31
zf-TRAF_2
Crescentin
Sina_ZnF
Spectrin_Anc-1
zf-rbx1
zf-RING_UBOX
zf-RING_2
FPP
BLOC1_2
zf-RING_4
FapA
zf-RING_6
Laminin_II
Exonuc_VII_L
DUF2203
ATG16
Motif
Other DBs
NCBI-GeneID:
113117560
NCBI-ProteinID:
XP_026142109
Ensembl:
ENSCARG00000039882
UniProt:
A0A6P6R8K8
LinkDB
All DBs
Position
17:complement(20007538..20023831)
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AA seq
570 aa
AA seq
DB search
MSAGRNVEQQIALQQRPPSLAMPSMAQRPRAEPGFLPQHGGFRDHFVTTPEAKYRCESCR
LVLCSPRQTECGHRFCESCITDLLSKPNPICPADLEPLFEDKIFRDVCCNREIMALKVYC
RSEKNGCKEQMSLQQVMDHLEVCPYFEVPCPLGKCKEKMMRKDMSEHLSRKCKHREITCE
FCNHKMALTELQKHKDTVCPAFPVACPNHCSFSSILRSELSSHQHDCPKAQVTCSFIRYG
CSFKGLNQAMREHESSFASEHLRMMAVRNTTLEAKVEDVKSELMERYKVLPSLSSRLAEV
ETQYEEMREKNRQLEQKLVSMQMLMSSHSEKLLEVEMELRELRAMREEVEALRGSVENMR
SIVSSLDPGRVGSSSGSHTLGSLEQQLSRHDDLMSVHDIRLAEMDLKLQVLETASFNGTL
IWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVM
RGEYDALLPWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTAEMNIASGCPLFV
AQTILENGTYIKDDTIFIKVTVDTSDLPDP
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagggcgtaatgtggaacagcagattgccctgcagcagcgtcctccatctctt
gccatgccctccatggcccagcggcccagggcagagccaggcttcttaccccagcacggc
ggatttagggaccacttcgtcacgacgcccgaggccaagtatcgctgcgagtcttgcagg
cttgtgctctgttcccctcgccaaacggagtgtggacatcgcttctgcgagagctgcatc
acagacctgctcagtaagcccaacccaatttgtccagctgatctagaaccactctttgaa
gataagatattccgggatgtttgctgcaacagggaaattatggctctgaaagtctactgc
cgaagtgagaaaaatggatgtaaagaacaaatgagtttacagcaggtcatggaccacttg
gaagtttgtccgtacttcgaggtgccatgccccttgggaaagtgtaaggagaagatgatg
aggaaagacatgtctgagcacttgagccgcaaatgcaaacacagagagatcacctgtgaa
ttctgcaatcacaagatggccctcaccgagttacagaaacacaaagatacagtctgtcct
gcgtttcctgtagcatgccctaatcactgctccttttcttccattctaagaagtgagctg
tccagtcatcagcatgactgtccaaaggctcaagtgacctgctcctttattcgctacgga
tgctcctttaaggggctgaatcaagcgatgagggaacatgagtccagttttgcgtccgag
cacctgagaatgatggcagtcagaaacaccacgctagaagccaaggtagaggatgttaag
agcgagctgatggagcgttataaagtcctgcccagcctcagcagtcgtctggcagaggtt
gagactcagtatgaggagatgagagagaagaacaggcagctggagcagaagctagtcagc
atgcagatgctgatgagctctcactcagagaaacttcttgaggtcgagatggagctgcgg
gagctgcgagccatgagggaggaggtggaggctctgagaggctccgtggagaacatgcgt
tcaattgtatcttctctcgacccgggtcgtgttggttccagttctggatctcacacgctg
ggctccttagagcagcagctctcccgtcacgatgacctgatgagtgtccatgacatccgc
ctggcggagatggacctgaagctgcaggtgctagagacggccagcttcaacggtacgctc
atttggaagatccgtgactacaaaagacggaaacaggaagccgtggcctcaaaaactctc
tcgctctacagccagcccttctacacgggctatttcggctacaagatgtgtgcccgcgtc
tatctgaatggagacggaatgggtaaaggcacccatctctcgctgttcttcgtggtcatg
cgtggggaatacgatgccttgctgccgtggccgttcaaacagaaagtaacattaatgcta
atggaccaggggccggcaaggaaacacttaggcgatgcctttaaaccggacccaaatagc
agtagctttcgccggcccactgctgaaatgaacatcgcctcgggctgtccactctttgtg
gctcaaactatcctggagaacggaacctacatcaaagacgacaccatcttcattaaggtg
actgtagacacctccgacctcccggacccttga
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