Carassius auratus (goldfish): 113119096
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Entry
113119096 CDS
T07313
Name
(RefSeq) ATP-dependent RNA helicase A-like isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113119096
03012 Translation factors [BR:
caua03012
]
113119096
Enzymes [BR:
caua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113119096
5.6.2.6 RNA 3'-5' helicase
113119096
Spliceosome [BR:
caua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113119096
Translation factors [BR:
caua03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113119096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
AAA_19
nSTAND3
PhoH
AAA_14
Motif
Other DBs
NCBI-GeneID:
113119096
NCBI-ProteinID:
XP_026144079
Ensembl:
ENSCARG00000010493
UniProt:
A0A6P6REA9
LinkDB
All DBs
Position
2:complement(18978895..18988450)
Genome browser
AA seq
1252 aa
AA seq
DB search
MADIKNFLYAWCGKKKLTPSYDIRAAGNKNRQKFVCEVRVESYSYIGMGNSTSKKDAQSN
AARDFVNYLVRMKEVSPGEVPALGVSVPDGGNEEGGGFGNLPSYCPLPPHLAVKKESDGE
PPEGSAPVPGVTGLGYSGFGNTQWERGANIQEYYSKRDEQDAKATLEAEEVDLNAGLHGN
WTLDNAKARLNQFFQKEKNQTDYKYSQVGPDHNRSFIAEMTVFVRQLGRKVTAREHGSTK
KLAAQSSALSIVRQLYHLGVIEAYTGQSKKKEGESVDVYEVNLSDDVQQQIRGIVQELGI
LIPSPPQDPNSPVSLVQGKMAQFEPSQRQSTAGVVPWSPPQVNWNPWTSSNIDEGPLAFC
TPEQISTDLLQELNYQLEQDKNLQTILMERSQLPVKNFKEQIMSTINKNPVVIIRGATGC
GKTTQVPQYILDEFIQAGRASECNIIVTQPRRISAVSVSERVSFERGEEVGKSCGYSVRF
ESVLPRPHASILFCTVGVLLRKLESGIRGISHVIVDEIHERDLNTDFLLVVLRDVVQAYP
DVRIILMSATIDTTMFREYFFNCPIIEVQGRAHPVQVYFLEDCVQMTHFVPPPMDRKKKD
KDEDGGEEDVNCNVICGSEYTAETKRAMSQLNEKETPFELIEALLKYIETLEVPGAVLVF
LPGWNLIYSMQKYLEMNPHFGGPRYRILPLHSQIPREEQRRVFEPTPEGVTKVILSTNIA
ETSITINDVVFVLDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHL
CSRARFDKLETHMTPEIFRTPLHEVALSIKLLRLGAIGNFLSKAIEPPPLDAVIEAEHTL
RELDALDCNDELTPLGRILAKLPIEPRLGKMMIIGCIFNVGDALCTISAAACFPEPFINE
GKRLGFVHRNFAGSRFSDHVALLSVFQAWDEVRMGGEDAEIRFCEHKRLNMPTLRMTWEA
KVQLKDILVNVGFPEECLLNQVFNTVGPDNNLDVVISLLTFGSYPNVCYHKEKRKILTTE
GRSALIHKSSVNCPFSSHDMVYPSPFFVFGEKIRTRAISAKGMTLVSPLQLILFGSKKIT
SNGEVVELDDWIKLKIPHDVAGGVAALRALMEALVVEVTKDPEYILNLDPNNERLLNVIR
LVSRPLSAGINLMASNPRFGDGPRPPKMARTDFGGGGEFRGRGGGGSWSGGGYRGGGGGF
RGSGGYRGGGGGYRGSGGYRGSNGGGGYRGGGGGGYGGRGNRGGWGGNRGGY
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggcggacattaagaactttttgtatgcttggtgtggaaaaaagaagctaacgccgagc
tatgacatccgagcagctggaaataaaaacagacaaaaattcgtgtgtgaggtgcgtgtt
gaaagttacagttacattggcatgggtaattctaccagcaagaaggatgctcagtccaat
gcagcccgagattttgtgaattatcttgttcggatgaaagaagttagtcctggcgaagtt
cctgctcttggggtcagcgtacctgatggagggaatgaggaaggtggtggatttggaaat
ctcccatcctactgtccactacctccacatctggctgtgaagaaggaatcagatggagaa
cctcctgagggttctgcacctgtccctggagtcacaggtttgggctattctggtttcggt
aacacacaatgggagcgaggagccaacatccaggagtattattccaagagagatgaacag
gatgcaaaagcgaccttagaagccgaggaagttgatctaaatgctggcctgcatgggaac
tggactctggacaatgcaaaagctcgtttgaaccagttctttcagaaggagaagaaccaa
accgactacaagtacagccaagtggggcctgaccacaacaggagctttattgctgagatg
acagtctttgtaagacaactgggtaggaaggttactgctcgtgagcatggctctacgaag
aagctggccgcccagtcatccgcgctgtctattgtccgtcagctttaccatttgggggtc
atagaagcctacacaggacagagcaagaagaaagaaggagagagtgtggatgtatatgaa
gtcaatctcagtgatgatgtacagcagcaaatacgcggtattgtgcaggaacttggcatc
ctgatcccttctcctcctcaggaccccaacagtccagtatctctggtgcaagggaagatg
gctcagtttgagccctcacaaaggcagagcacagcaggggtggtgccgtggtctccaccg
caggtcaactggaacccctggaccagctccaacattgacgaaggaccgctggcattttgt
accccagaacagatcagcacagacctgctgcaggagctcaactatcagctcgaacaggac
aaaaatctgcagacgattctcatggagcgaagtcagctgccagttaagaatttcaaagag
caaatcatgtccaccattaacaaaaacccagtggtcattattcgtggagccactggctgc
ggaaagaccactcaggttcctcagtacatcttggatgagttcatacaggcaggcagggca
tctgaatgcaatatcattgttacgcagccaagaaggatcagtgctgtgtcagtgtctgaa
cgagtatcgttcgagagaggagaggaggtggggaaaagctgtggctacagtgtgcgcttt
gagtctgtcctgcccagacctcatgccagcatcctcttctgcacagttggggtgttgctg
aggaagctggaatctggtatccgtggaataagtcatgtgattgtggatgaaatccatgag
agggacttaaatactgatttcctgttggtagtgttgagggatgtggtccaggcttaccct
gatgtgcgcatcatcctcatgtctgccaccattgacaccaccatgttcagggaatacttt
tttaactgtcctatcatcgaggtgcaaggacgtgcacatcctgtgcaagtgtattttcta
gaagactgcgttcagatgactcatttcgtaccaccaccaatggaccggaagaaaaaagat
aaagatgaagatggtggagaggaagatgtgaactgtaatgtcatctgtggatctgagtat
accgctgaaaccaagcgtgccatgtctcagttgaatgagaaggaaactcctttcgagctc
attgaggctttgctgaagtacattgaaacactggaagtaccaggggccgtgctagtcttc
ctgccaggctggaacctcatctattccatgcagaaatacctggagatgaacccacacttc
ggtggtcctcgctaccgaatcctgccccttcactctcagatccccagggaagaacagaga
cgagtgtttgagcccactcctgagggtgtgactaaggtcattttgtccaccaacatcgct
gaaaccagcatcactatcaacgatgtggtctttgtcctcgactcctgcaagcagaaagtg
aagttgttcacttctcacaacaacatgacaaactatgccacagtgtgggcctccaagacc
aaccttgagcagaggaaggggcgagctggcagagtcagacccggcttctgctttcacctg
tgcagcagagctcgttttgacaagctggagacccatatgactcctgaaatcttccgcacg
cccctgcatgaagtggccctcagcatcaagctactgagattgggtgccatcgggaatttc
ttgtccaaagccattgagccgcctccattggatgccgttattgaagctgaacatacactg
agagagctggatgctctagactgtaatgatgagctgactccactgggacgcattctggcc
aaactgcccatcgaaccacgtctgggaaagatgatgatcataggatgcatctttaatgtt
ggagatgccttgtgcactatctcagcagcagcctgtttccctgagcccttcatcaacgag
ggcaaacgcctcggctttgttcataggaattttgcgggctcccgtttctcagatcacgtt
gccttactctctgtcttccaggcctgggatgaagtccggatgggaggtgaggatgcagag
atccggttttgtgagcacaagaggctgaacatgcccactttgaggatgacttgggaggcc
aaggtccagctgaaagacattcttgtcaatgtcggcttccctgaagagtgcctcctgaat
caggtgtttaacactgtgggaccagacaataacttggatgtggtgatctctctgctgacg
tttggctcttacccaaatgtgtgttaccacaaagagaaaaggaagatcctgaccaccgag
gggcgaagtgctctcattcacaaatcctcagtcaattgtccattcagcagccacgatatg
gtgtatccatctcctttttttgtctttggggaaaagatccgaactcgagccatttctgcc
aaaggaatgactcttgtcagtcctcttcagcttattctgttcggctcgaagaagatcacc
tccaatggagaagttgttgagcttgatgactggatcaaattgaagattccccatgatgta
gccggtggtgtggcggccctgagggcactgatggaagccctggtggtggaggtgaccaaa
gacccagaatacatcctaaatttggatcccaacaatgagcgcttgctgaacgtcattcgg
cttgtgtctagacccttgtcagcgggcatcaaccttatggcctccaacccacgctttgga
gatggtcctcgtccaccaaagatggcacgtactgactttggagggggcggagagttcagg
ggtcgtggaggaggcggatcctggtctggtggaggatatagaggcggaggaggcggcttc
agagggtctggagggtatcgtggaggcgggggtggatacagggggtctggtggatacagg
ggatctaatggaggtggaggatacagaggaggtggaggaggaggatatggagggagggga
aacagaggtggctggggaggaaacagaggtggttattaa
DBGET
integrated database retrieval system
