Carassius auratus (goldfish): 113120786
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Entry
113120786 CDS
T07313
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113120786
Membrane trafficking [BR:
caua04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113120786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
113120786
NCBI-ProteinID:
XP_026146612
Ensembl:
ENSCARG00000029670
UniProt:
A0A6P6RMF7
LinkDB
All DBs
Position
20:complement(8511525..8567512)
Genome browser
AA seq
2044 aa
AA seq
DB search
MALVVYLKTVTELRGKGDRIAKVTFRGLSFFSRVLENCEDEARFEQAFRWPIGSQVDGDE
MLEIQVFNYSKVFTNRLIGTFRMVLQKVVEEGHLEVSDTLIDDNNSAIRTSISIEIKYQT
MDGSVKVWSDGEFLDIPDDCDGTFQFETDSLLSGRSQSSGTSPGRSIHGIPTFRKTGKGV
FSAMKLGKTRISKDDHKKGDDAAILDAEDLDRKTMRLGGGLDPDTISLASVTAVTTNVSN
KRSKPDIKMEPSSGRLVDYQISVTVIEARQLVGLNMDPVVCVEIGEEKKYTSMKESTNCP
YYNEYFVFDFHVPPDVMFDKILKISVIHSKNLLRSGTLVGTFKLDVGTVYSQAEHQFHHK
WAMLSDPDDITAGCKGYVKCDIAVVGKGDNIKTPHKANETDEDDIEGNLLLPEGVPSERQ
WARFYVKIYRAEGLPKMNTSIMANVKKAFIGENRDLVDPYVLVQFAGQKGKTSVQKSSYE
PIWNEQVIFTEMFPPLCRRLKVQIRDSDKVNDVAIGTHFIDLRKIANDGDKGFLPTMGPA
WVNMYGSTRNYTLMDEHQDLNEGLGEGVSFRARLLISIAVEILDTSSAEIMSSTEVQIEP
VSNMSESATGKMEEFFLFGSFLEATMIDRKIGDKAISFEVTIGNYGNQIDGVSKPASAKK
KKEGGGESEEEETELIHNSSDEEGEDDGDLTSVPSTPPMKPVITDRNYFHLPYFEKKPCI
YIKSWWQDQRRRLYNSNIMDKIADKLEEGLNDVQEIIKTEKAYPERRLRGVLEELSTSCS
RFVTLANKDQNLSGRTKLDKERLKSCMRELESMAQQAKTIRSQVKRNTVRDKLKLVLNFL
HRLRFLADEPQHSIPDVFIWMISNNKRIAYARIPSKDILYSIVDEEMGKDCGKVKAVFLR
LPGKKGFGPAGWTVQAKLEMYLWLGLNKQRRDFLSGLPSGYEENKATKGTGIQAVPPISL
VYNMKQVFQLRAHMYQARSLFAADTSGLSDPFARVFFSTHSQVTEVLSETLCPTWDQLLV
FDNVELYGEAGELRDDPPIIVIELYDQDTVGKAEFIGRTFAKPLTKMVDEHYGPPRFPPQ
LEYYQIYRGNCAAGDLLAAFELLQIPYDDEEIRRALIAVHDFAVPQIKIGPAGRAALPPI
DGPTDSDRGPILPVPLGIRPVLSRYRIEVLFWGLRDLKRINLAQVDRPRVDIECAGKGVQ
SALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSHAVTSLRK
FIYSPPDKTANNWAHTARLANGYMALTNGTSHSRPHSRPISHPSGEIVVNMDPEPHIKKM
DTVVKMDATTDAVVKVDLNEDEKEKEKKKKKKKKGEEVDEEEPDESMLDWWSKYFASIET
MMENLRAQEAALAEAEEREDLEIAAESAEIKADDFPMKGTKPKEKSKDKKSSKDKKKNHD
GTDKRPPKPKVDELMVYNKELESEFGSFEDWLHTFNLFRGKAGDDIDHNVVDDDRIVGRF
KGSLCMYKLPLSEEIIRDAGFDPNMGMFQSIPHNDPINVLIRIYIIRATDLHPADINGKA
DPYIVIRLGKSEIRDKENYISKQLNPVFGKSFDIEATFPMESMLTVAVYDWDLVGTDDLI
GETKIDLENRYYSKHRATCGIASNYSVHGYNVWRDPQKPTQILAKLCKEAKLDGPNYGPG
GKVKVANRIFLGPTEIEDESGLKKQTEEHLALTVLRHWEEIPRVGCKLIPEHVETRPLLN
PDKPGIEQGRIEMWVDMFPMDVPAPGPAIDISPRKPKRYELRVIIWNTDEVILEDDDYFT
GEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRFVFPFDYLMAEEKIVISKKES
MFSWDETEYKIPARLTLQVWDADHFSADDFLGAIELDLNKFPRGAKTAKQCSLNMVLKEH
ELPTISIFKQKRVKGWWPFVARDENDEFELTGKVEAELHLLTAEEAEKNPVGLGRNEPEP
LEKPNRPDTTFLWFLSPLKAIRYLICNRYKWLIIKIVLALLLLIMVGLFLYSMPGYLVKK
LLGA
NT seq
6135 nt
NT seq
+upstream
nt +downstream
nt
atggctttagtagtgtacctgaagactgtcacggagcttcgtggaaagggggaccgcatc
gctaaagtgactttcagaggtctctcctttttctcccgggtgcttgaaaactgcgaggat
gaagctcggtttgagcaggcattccgctggccaattgggagtcaagtggacggcgacgag
atgctggagattcaagtgtttaattacagcaaagttttcactaacaggttaattggcact
ttccgcatggttctgcagaaggtggtggaggagggtcacttggaggtgtctgacactctt
attgacgacaataactcagccatacggacaagtatttccatagagatcaaatatcagacc
atggacgggagtgtgaaggtatggagcgatggtgaattccttgatattccagatgactgt
gatggaactttccagtttgagacagacagtctactctctggacgcagccagagctctggg
acatcacctggacgttctatccacggcattcccacattccgcaagacaggaaaaggagtg
ttttcagccatgaaactgggaaagacacgcatctctaaagatgaccacaaaaaaggagat
gacgctgccattttggatgcagaagatcttgatcgaaagaccatgcgtctgggcggtggg
ctcgaccctgataccatctcactggcctctgtcactgcagtaaccacgaacgtctccaac
aaaagatcaaagcctgacattaagatggagcccagttcagggcgtcttgtggattatcag
atcagcgtaacagtaatcgaggcccgtcagttggttggtttgaacatggatcctgtggtt
tgtgtggaaattggcgaggagaagaagtatacatcgatgaaggagtccacaaactgcccc
tactacaatgagtactttgtctttgacttccatgtgcctccagatgtcatgtttgacaag
atcctgaagatttcggttatacattctaaaaaccttctacgaagcggtactctggtgggc
accttcaaactagatgtgggaactgtttactcacaagctgagcatcagttccaccacaaa
tgggcaatgctgtcggaccctgatgacatcacagccggctgcaaaggttacgttaagtgt
gacattgcagtcgtaggaaaaggagacaacatcaagacaccgcacaaggccaatgaaaca
gatgaggatgacatagaggggaatcttcttttgccggagggtgttccatcagagagacaa
tgggctcggttttatgttaagatttacagagctgagggactaccaaaaatgaacaccagc
atcatggccaatgtgaaaaaagcatttatcggggagaacagggatcttgtggacccttat
gtcctggtgcaatttgcagggcagaagggtaaaacgtcagttcagaagagcagctacgag
cccatctggaatgagcaagtaatcttcaccgagatgttcccacctttgtgtaggcgactg
aaagttcagatccgtgattcagacaaggtgaatgatgttgccataggaacccatttcatt
gatctacgaaagatcgcaaacgatggagacaaagggttcctacctactatgggcccagcc
tgggtgaatatgtatggttctacccgtaactacaccctgatggatgagcaccaggaccta
aatgaggggctgggggaaggtgtgtcttttagggcacgcctcctcattagtatcgcagtg
gagatcctggacacctcctctgcagaaataatgagctctactgaggtacaaatagagccg
gtgtccaacatgtcagagagtgccacggggaagatggaggaatttttcctttttggatcg
ttcttggaggccacaatgatagacagaaaaattggagataaagccatcagctttgaagtc
actatcggtaactatggtaaccagattgatggagtgagcaagcctgcatcagcaaagaag
aagaaagagggtggaggggagagtgaagaagaggagactgagctcatccataactccagc
gatgaagagggagaggatgatggagatttgacatctgtgccgtccacccctcctatgaaa
ccagttataactgacaggaattacttccacttgccttactttgaaaagaaaccctgcatt
tacatcaagagctggtggcaagatcagaggagacggctctacaactccaatataatggac
aagattgcagataaactggaggaaggtctgaatgatgttcaagaaatcataaaaacagag
aaagcatatccagaacgcagacttcgaggagttttagaggagcttagcacaagttgcagt
cgatttgttacactggcaaacaaagatcagaatctatccggaagaaccaagctggacaaa
gagaggctcaagtcctgcatgagagagttggagagtatggctcagcaggcgaagactatc
cgctcacaggtgaagagaaacacagttcgagacaaactcaagctagtgttgaatttcctt
cacaggcttcgtttcctggcagatgagccccagcacagcatccctgatgtgttcatatgg
atgattagcaacaacaaacgcatagcgtacgcccgcattccctccaaagacatcctctac
tcaattgttgacgaagagatgggaaaggactgtgggaaagttaaagctgtttttctcagg
ctgcctggaaagaaaggctttgggcctgctggctggacagttcaggctaaactggagatg
tatttgtggctgggcttgaacaaacagaggagggacttcttgagtggcctccctagcggc
tatgaagaaaacaaggctactaagggaaccggcattcaagctgttcctcccatcagcctg
gtttataacatgaagcaggtgtttcagctgagggcccacatgtatcaggctcgcagtctg
tttgctgctgacactagcggcctgtctgacccttttgcaagggttttcttctccacccac
agccaggtgacagaggtcctcagtgagactctttgtcctacatgggatcagttgcttgtg
tttgataatgttgaactctacggtgaggctggggaactccgtgatgatccaccaatcatt
gtcattgaactgtatgaccaagacactgtggggaaagctgagttcattgggcgaacattt
gcaaagccactaactaagatggttgatgaacactacgggccgccacggtttccccctcag
ctggagtactaccagatctacagaggaaactgcgctgcaggagatctgttggctgctttt
gagctcctgcagattccttatgatgatgaggagatcaggagggcccttattgctgtccat
gactttgctgtacctcagatcaagattggtccagcagggcgggcagctcttcctccaatt
gatgggccgactgattctgaccgtggacccattcttcctgttccattgggcatacgacca
gttctcagcagatatcgtatagaggtcctgttctggggtctgagggaccttaaaagaatc
aatctggctcaggtggacaggcctcgtgtggacatcgagtgtgcagggaaaggagttcag
tccgccctcattcagaactacaagaagaatcctaacttcagcacgttagtgaagtggttt
gaagtggatctgccagaaaatgagcttcttcatccaccactcaatattcgggtggtggac
tgcagggcattcggacgctacaccttggtggggtctcatgccgtgaccagccttcgcaag
ttcatctacagccccccagacaagactgctaacaactgggctcacaccgctagactggcc
aatggctacatggctctcacgaatgggacatctcattcccgcccccactcccgtcccatt
tctcatccctcaggtgaaattgtggtcaacatggaccctgaaccccacattaagaagatg
gacacagttgtcaagatggatgctaccaccgatgctgttgttaaagtagacttgaatgag
gatgagaaggagaaagagaaaaagaaaaagaagaaaaagaaaggcgaagaagtggacgag
gaggagccggatgagagcatgttggactggtggtccaaatactttgcctcaatagagact
atgatggagaatctcagagcccaggaggctgctctggcagaggcagaggaaagagaagat
ttggagatagcagcagagagtgcagagatcaaagctgatgactttcctatgaaaggcacc
aaacccaaggagaagagcaaagacaagaagagctccaaggacaaaaagaagaaccacgat
ggcacagataaacgacctccaaaaccaaaagttgatgaactcatggtgtacaataaagag
ctggagagtgagtttggtagctttgaggactggctccacaccttcaacctgtttagagga
aaggctggagatgacattgaccacaatgtggttgatgatgacaggattgtgggcagattc
aagggctccctctgtatgtataaactcccactgtctgaggagatcatcagggacgcagga
tttgacccaaacatgggcatgttccaaagtattcctcacaatgaccctatcaatgttctc
ataaggatttatatcattagagccacagatctgcatcccgcggatataaatggtaaagca
gatccttatatagtcattcgattgggaaagtcagagattcgggacaaggagaactacata
tccaagcaactaaatcctgtctttggaaaatcgttcgacatagaggctacgttcccaatg
gagtccatgctgacggttgcagtatatgactgggatttggttggaactgacgacctgatt
ggtgagactaagatcgatttggagaaccgatactacagcaaacacagagccacatgtggc
attgcatccaactactctgtccatggttacaatgtatggcgtgaccctcagaagccaacc
cagatccttgctaagttgtgcaaagaagctaaactggatggacccaattatggacctggt
gggaaggtcaaagttgcaaaccgcatctttcttgggccaacagaaattgaagatgagagc
ggtctgaagaagcagactgaagaacacttggctcttacggttcttaggcattgggaagag
atcccacgtgttggttgcaaactcatccctgagcatgtggagaccagaccgctcctcaac
ccagacaagccaggcatagagcagggaaggattgaaatgtgggtggacatgtttcctatg
gatgtaccagcaccaggaccagccattgacatatcaccacgcaaaccaaagagatatgag
ctcagggtgataatatggaatactgacgaggtaattctggaagacgatgattacttcaca
ggggaaaagtccagtgacatttttgtgaggggttggctaaaaggacagcaggaggacaaa
caggacacagatgtgcattatcactctctaactggggaaggaaacttcaactggcgcttt
gttttcccttttgactatctcatggctgaggagaagatagtcatctctaagaaggaatcc
atgttttcctgggatgagaccgagtacaagattcctgctcgactcacccttcaagtatgg
gatgctgaccatttctccgcagatgacttcctgggtgcgattgagctggacttgaataag
tttccccgtggggcaaaaacagctaagcagtgctctctcaacatggttctcaaagagcat
gagctgccaaccatctccatcttcaaacagaaaagagtgaagggctggtggccatttgtg
gcccgggatgagaatgatgaatttgagctcacagggaaagtggaggcagagctccatctg
ttgacagcggaggaggcagagaaaaatccagtcggccttgggcggaatgaacctgaacca
cttgagaaaccaaaccgtcctgacaccaccttcctgtggtttttgagtccgctgaaggcc
atccgctacctgatatgcaaccgctacaaatggctcatcatcaagatcgtcttggctctg
ctgctgctgatcatggtgggcctgtttctctacagcatgccaggctatctggtcaagaag
ctgctcggggcctaa
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