Carassius auratus (goldfish): 113120880 Help Entry 113120880         CDS       T07313                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism caua  Carassius auratus (goldfish) Pathway caua04115   p53 signaling pathway caua04145   Phagosome caua04148   Efferocytosis caua04350   TGF-beta signaling pathway caua04510   Focal adhesion caua04512   ECM-receptor interaction caua04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:caua00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     113120880   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     113120880  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     113120880    04148 Efferocytosis     113120880   09143 Cell growth and death    04115 p53 signaling pathway     113120880   09144 Cellular community - eukaryotes    04510 Focal adhesion     113120880   09142 Cell motility    04820 Cytoskeleton in muscle cells     113120880  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:caua04131]     113120880   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:caua00536]     113120880 Membrane trafficking [BR:caua04131]  Endocytosis   Phagocytosis    Opsonins     113120880 Glycosaminoglycan binding proteins [BR:caua00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    113120880 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd TSP1_CFP_C EGF_3 TSP1_ADAMTS Laminin_G_3 cEGF TSP1_CCN Zn_ribbon_NUD EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  113120880 NCBI-ProteinID:  XP_026146778 Ensembl:  ENSCARG00000011080 UniProt:  A0A6P6RP19 LinkDB All DBs Position 20:10560249..10570946 Genome browser AA seq 1171 aa AA seqDB search MKSATIFLLLMLWSCESARVAESRDDNSVYDLFELVQVPKKNHEVTLVKGDDPYSPAYKI LNPDLIPPVPESAFRDLIDSIHAERGFLLLLNFKQFKHTRGSLLTVEKKDGSGPVFEIIS NGKANTLDIVFSTEDKQQVVSIEEADLAVGHWKNITLFVQEDRVQFYVGCEEVNTAELDA SIQTILTQETPGVASLRIGKGAVKDRFMGVLQNVRFVFGTTLEAILRNKGCKNSIITDII TLDNPINGSRPAIRTDFTGHKTKDLQMICGFSCEDLAAMFKELKGLGVVVQELSNELRKV TDEKNMLIGGMGIRPGVCLHNGIVHKNKEEWTVDDCTECTCQNSATLCRKISCPLIPCAN ATVPDGECCPRCGTPSDSAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQ TRDCYLQECDKRFKQDGGWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQMEGKDCQGEGR QTEKCEKSPCPVNGGWGPWSPWDTCSATCGGGVQNRKRICNNPVPMYGGKGCVGDAKASQ ICNKQACPIDGCLSNPCFEGAQCTSFPDGSWKCGKCPTGYTGNGITCKDINECKEVPDAC FEFNGVHRCENTVPGYNCLPCPSRYTGPQPFGQGLEDAASKKQVCTPRNPCLDGSHDCNK NARCNYLGHFSDPMYRCECRPGFAGNGLICGEDTDLDGWPNADLVCVENATYHCKKDNCP NLPNSGQEDYDKDGVGDACDNDDDDDGIPDDRDNCPLIFNPRQYDYDRDDVGDRCDNCPY NSNPDQTDTDNNGEGDACAVDIDGDGILNENDNCPYLYNTDQKDTDLDGVGDQCDNCPLE HNPDQVDSDSDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDYDDD NDGIPDDKDNCRLVPNKDQLDSDGDGRGDACKDDFDQDNVLDIYDVCPENFDISETDFRK FQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTERD DDYAGFVFGYQSSSRFYVVMWKQITQTYWSSTPTKAQGYSGLSIKVVNSTTGPGEHLRNA LWHTGDTPGQVRTLWHDPKNVGWKDFTAYRWHLTHRPRTGHIRVVMYEGKKIMADSGRIY DKTYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atgaagtcagctacaatctttttgctactgatgctttggagctgcgagagcgcgagagtc gcagaaagtcgagacgacaacagcgtttacgatctgtttgagctcgtccaagtgccgaag aaaaaccacgaggtgactctggtgaaaggcgacgatccgtacagccccgcctacaagatc ctgaaccccgacctgattcccccggttcccgagagcgccttcagggacctgatcgattcc atccacgcggagagaggatttctgcttctgctcaacttcaaacagttcaaacacacgaga ggaagccttctgaccgtggagaagaaagatggctccggacccgttttcgaaataatttcc aacgggaaagccaatactctggacattgtattttccactgaagacaagcaacaggtcgtg tctatcgaggaagcggatctggctgtgggccactggaaaaacatcacgcttttcgtgcag gaggacagggttcagttctatgtgggatgcgaggaggtgaatacagcggagctcgatgct tctatccagactatcctcactcaggagaccccaggtgtggcgagcctgaggatcggcaag ggcgcagtgaaggacaggttcatgggggtgttgcagaacgtgcgctttgtgtttggtacc acactggaggcaattctgaggaataaaggatgcaaaaactcaattataactgatatcatc acccttgacaatcccataaatggatccagacctgcaatcaggactgatttcactggccac aaaacaaaagatctgcagatgatttgtggcttttcatgtgaggacctggctgccatgttc aaggagctgaaaggtcttggtgtagtggtgcaagagctgtccaatgaactccgcaaagtg acggacgagaaaaacatgctcattggtggcatgggcatccgtcctggagtctgtcttcac aatggaattgtgcacaaaaacaaggaggaatggacagtggacgattgcacagagtgcact tgccagaactctgcaacgctgtgccgcaagatttcatgccccctaatcccatgtgccaac gccacagtgcctgatggggagtgttgccctcgatgtggaaccccgagcgactccgctgag gatggttggtccccctggtctgaatggacccattgttctgtgtcctgtggaaggggcatt cagcagcgcggccgctcctgcgaccgcatcaataacaactgcgaaggcacgtcggtgcag acgagagactgctaccttcaggagtgtgacaagcgctttaagcaggatggcggctggagt cactggtcaccctggtcttcctgctcggtcacctgtggtgctggtgttatcacacgcatc cgtctctgcaactccccaacacctcaaatggaaggcaaagattgccagggtgaaggtcgg caaactgaaaagtgtgagaaatcaccatgtccggtcaatggaggctggggaccatggtcg ccctgggatacttgctctgccacctgtggcggtggagtccaaaaccgtaaacgtatttgc aataacccggtacccatgtatggtggcaaaggctgtgtgggagatgcaaaggccagccag atttgcaacaaacaagcctgtccaattgatggatgcctttcaaatccatgctttgaagga gcccagtgtacaagcttcccagacggctcttggaaatgtggaaaatgccccacaggatac actggcaatggaatcacctgcaaagatatcaatgagtgtaaggaggtccccgatgcctgc tttgaatttaacggagtccacaggtgtgagaacacagtgccaggctacaactgcctgcct tgcccctcacgctacactggcccacagccgtttggtcaaggattggaggacgctgcttcc aagaaacaggtctgcacccctcgtaatccctgcctcgatggaagccacgattgcaataag aacgctcgctgcaactacctgggccatttctcagaccctatgtaccgctgtgagtgcagg cctggctttgctggaaatggactgatctgtggagaggacactgatcttgatggctggcct aatgctgatcttgtgtgtgtcgagaacgcaacctatcactgcaagaaggacaactgcccc aatcttcctaactctgggcaagaggactatgacaaggatggcgttggtgatgcttgtgat aatgatgatgacgacgatggcattcctgatgacagggacaactgcccactcatcttcaac ccaagacagtacgattacgatcgcgatgacgtgggagaccgctgcgacaactgtccgtac aacagcaacccagaccagaccgacactgacaataatggtgaaggtgacgcctgtgctgtg gacattgatggagatggtattttgaatgagaacgacaactgcccatatctgtacaacact gaccagaaagacaccgatctcgatggagttggtgaccagtgtgacaactgccctctggaa cacaacccagaccaggtcgactccgattctgaccgtgttggagacaaatgtgacagcaac caggatatcgatgaggatggtcaccaaaacaacctggacaactgcccgtacatccccaac gctaaccaggctgatcacgacaaggatggtaaaggagatgcttgcgactacgatgatgat aatgacggcatccctgatgacaaagacaactgcagattggttcccaataaagatcaactg gattctgatggcgatggacgtggtgacgcctgtaaagatgactttgaccaagacaatgtc ctggatatctatgatgtctgtcctgagaactttgacatcagtgaaacagacttccgcaag ttccagatggttcctctggatcccaagggcacttctcagatcgaccccaactgggtggtt cggcaccaaggaaaagaactggttcagacagtcaactgtgaccctggcattgctgttggt tttgatgagttcaattcagtcgacttcagtggaacgttcttcatcaacactgagagggat gatgactatgccggcttcgtttttggataccagtccagctctcgcttctacgtggtcatg tggaagcagatcacacagacctactggtccagcacacctaccaaagcacagggttactca gggctgtcgatcaaagtggttaactccaccacaggcccaggcgagcatctgaggaatgcc ctgtggcacactggagacactccaggacaggtgcgcacactgtggcacgacccaaagaat gtgggatggaaggacttcactgcttacagatggcacttgactcatagaccaagaactgga cacataagagtggtcatgtatgaaggaaaaaagatcatggcagattctggaagaatttat gacaaaacctatgcaggcggaagactaggtctctttgttttctcacaagagatggtgtac ttctcagacctcaaatatgaatgcagagatgcgtaa

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