Caulobacter sp. NIBR1757: AMEJIAPC_00141
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Entry
AMEJIAPC_00141 CDS
T10944
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
caub Caulobacter sp. NIBR1757
Pathway
caub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AMEJIAPC_00141 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caub03400
]
AMEJIAPC_00141 (nth)
Enzymes [BR:
caub01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AMEJIAPC_00141 (nth)
DNA repair and recombination proteins [BR:
caub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AMEJIAPC_00141 (nth)
Prokaryotic type
AMEJIAPC_00141 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
ORC6_2nd
IMS_HHH
vRNAP_plug
H2TH_5
SdiA-regulated
Motif
Other DBs
NCBI-ProteinID:
WGM37247
LinkDB
All DBs
Position
143259..143954
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AA seq
231 aa
AA seq
DB search
MPAAPKKTNKQPLRKRVSPKERARVDALFERFSTLAENPKTELHFDSPFTLVVAVALSAQ
ATDVQVNKATDKLFAVYNTPQAIFELGVDGLIPWINSIGLFRNKAKNVIELSRIILEKHG
GQTPLNREDLQALPGVGRKTASVVLNELDIEPAIAVDTHVFRVSHRLKLSAGKTPDAVEA
DLMAIVPQPYLTRAHHWLILHGRYVCLARKPRCAECQVADLCPSRELFLGG
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgcgccgaagaaaacaaacaaacagcctctacgtaagcgtgtctcgcccaaa
gagcgcgcccgcgtcgacgccctgttcgagcgcttctccaccctggcggaaaaccccaag
accgaactccacttcgacagtcccttcaccctggtcgtcgccgttgcgctctcggcccag
gccaccgacgtccaggtcaacaaggcgaccgacaaactcttcgccgtctacaacacgccg
caagcgatcttcgagctcggcgtcgatggcctgatcccttggatcaactcgatcggcctg
ttccgcaacaaggcgaagaacgtcatcgaactgagccgcatcatcctcgagaagcacggc
ggccagaccccgctcaatcgcgaggacctccaggccctgcccggcgtcggccgcaagacc
gcatccgtcgtcctcaacgagctcgacatcgaaccggccatcgcggtggacacccacgtc
ttccgcgtctcccaccgcctgaagctgtcagccggaaagacccccgacgccgtcgaagcc
gacctgatggccatcgtgccgcagccctacctgacccgcgcccaccactggctgatcctg
cacggccgctacgtctgcctggcccgcaagcccaggtgcgccgaatgccaagtcgccgac
ctgtgcccgtcgcgcgaactgttcctgggagggtga
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