Corynebacterium auris: CAURIS_04745
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Entry
CAURIS_04745 CDS
T09271
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
caui
Corynebacterium auris
Pathway
caui03030
DNA replication
caui03410
Base excision repair
caui03420
Nucleotide excision repair
caui03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
caui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAURIS_04745 (ligA)
03410 Base excision repair
CAURIS_04745 (ligA)
03420 Nucleotide excision repair
CAURIS_04745 (ligA)
03430 Mismatch repair
CAURIS_04745 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caui03032
]
CAURIS_04745 (ligA)
03400 DNA repair and recombination proteins [BR:
caui03400
]
CAURIS_04745 (ligA)
Enzymes [BR:
caui01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CAURIS_04745 (ligA)
DNA replication proteins [BR:
caui03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CAURIS_04745 (ligA)
DNA repair and recombination proteins [BR:
caui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CAURIS_04745 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAURIS_04745 (ligA)
MMR (mismatch excision repair)
DNA ligase
CAURIS_04745 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CAURIS_04745 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
WJY67864
LinkDB
All DBs
Position
989509..991554
Genome browser
AA seq
681 aa
AA seq
DB search
MSGPVAKLGCVTDISPDVRRTWDELAEQVRHHRDLYYNGQPVISDSEFDTLFRELEQLER
EHPELAVPDSPTKQVGAPTSSAFADVTHLERMMSLDNVFSAAELADWLAKTPGPYLTELK
IDGLSIDLVYEDGELTRAATRGDGRVGEDITANARVIEDIPRSLKGDFPPLLEVRGEVFI
RPEDFPELNEQRIKEGGKPFANPRNTAAGGLRQKNPEDVKKRRLRMICHGIGAREGFRPD
TQHEAYQKMAEWGLPVSEYTRRAETAAEVHKAVDYWAEHRHDAIHEMDGLVVKVDSVAAQ
RALGMTSRAPRWAIAYKYPPEEVTTKLLDIQVSVGRTGRATPFAVMEPVLVSGSTVSMAT
LHNQEEVKRKGVLIGDTVVIRKAGEIIPEVLGPVADLRDGTEREFVYPENCPSCGTKLAP
AREGDADWRCPNTRSCPAQLAQRLEYLAGRGAFDIEALGEKGAIDLTSRGILTDEGDLFS
LTEEDLERSEAYTTKKGAVSANGRKLLANLDTARETELWRVLVALSIRHVGPTAARALAA
RYRSMDALIDAPVDDLAETDGVGAIIAESFKDWFEVDWHRDIVRKWRDAGVTMEDSAAEA
LPQTLAGLTVVATGSLENFTRDEAKEAILSRGGKASGSVSKKTDYVVVGENAGSKAAKAE
ELGVRTLSEEEFMRLLESGQV
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggccggtggctaagcttgggtgcgtgactgatatttcccccgatgtgcgccgt
acgtgggacgagctcgccgagcaggtgcgccaccaccgcgacctgtactacaacggccag
cccgtgatctccgacagtgagttcgacacgctgtttcgcgagctcgagcagctcgagcgc
gagcaccccgagctggcggtgccggactcgccgacgaagcaggtgggagcgccgacctcc
agcgcgtttgcggacgtgacgcacctcgagcggatgatgagcctcgacaacgtgttctct
gccgcggagctcgcggactggctggccaagacgccggggccctacctgaccgagctgaag
atcgacgggctgagtatcgacctcgtgtacgaagacggcgagctcacccgggccgccacg
cgcggcgacggccgagtgggcgaggacatcaccgccaacgcgcgcgtcatcgaggacatc
ccgcgctccctgaaaggggatttcccgccgctgctcgaggtgcgcggcgaggtgttcatc
cggcccgaggacttccccgagctcaacgagcagcgcatcaaggagggaggaaaacccttc
gccaacccgcgcaacaccgcggcgggcgggctgcggcagaagaacccggaggacgtgaag
aagcgcaggctccggatgatctgccacggtatcggcgcccgcgaggggtttcgccccgac
acgcagcacgaggcctaccagaagatggccgagtggggcctgcccgtctccgagtacacg
cgccgcgcggagacggccgccgaggtccacaaggccgtggactactgggccgagcaccgc
cacgacgcgatccacgagatggacgggctggtggtcaaggtcgacagcgtggccgcccag
cgcgcgctgggcatgacctcgcgcgcgccgcgctgggccattgcctacaagtacccgccg
gaggaagtgaccacgaagctgctggacatccaggtttcggtggggcgcaccgggcgcgcg
acccccttcgccgtgatggagcccgtcctcgtctccggctccacggtgtccatggccacc
ctgcacaaccaggaggaggtcaagcgcaagggagtcctcatcggggatacggtggtgatc
cgcaaggccggggagatcatccccgaggtcctcggccccgtcgctgacctgcgtgacggc
accgagcgcgagttcgtctacccggaaaactgcccgagctgcggcacgaaactcgccccc
gcgagggagggcgacgccgactggcgctgccccaacacgcgctcgtgcccggcgcagctg
gcccagcgcctggagtacctcgccgggcgcggggccttcgacatcgaggcgctcggggag
aagggcgcgatcgacctgacctcgcgcggcattctcacggacgagggcgacctgttctcc
ctcaccgaggaagacctggagcgctcggaggcgtacacgacgaagaagggcgcggtgagc
gcgaacgggcgcaagctgttagcaaacctcgacacggcgcgcgagaccgagctgtggcgc
gtcctcgtcgcgctgtccatccgccacgtcggccccaccgcggcccgcgcgctcgccgca
cggtacaggagcatggacgcgcttatcgacgccccagtggacgacctggccgaaaccgac
ggcgtgggggcgattatcgccgagtccttcaaggactggttcgaggtggactggcaccgc
gacatcgtgcgcaagtggcgcgacgccggggtgaccatggaggattccgccgccgaggcg
ctcccccagaccctcgcggggctgacggtggtggccacggggagccttgagaacttcacc
cgcgatgaggccaaggaggcgatcctctcgcgcggtggcaaggcctccggttcggtgtcg
aagaagacggactacgtggtggtgggagaaaacgccggctccaaggccgcgaaggcggag
gagctcggcgtgcgcaccctcagcgaggaggagttcatgcggcttctcgagtctgggcag
gtgtag
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