Candidozyma auris: CJI96_0001664
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Entry
CJI96_0001664 CDS
T04850
Name
(RefSeq) U5 snRNP GTPase SNU114
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
caur
Candidozyma auris
Pathway
caur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CJI96_0001664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caur03041
]
CJI96_0001664
Spliceosome [BR:
caur03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CJI96_0001664
Complex C
U5 SnRNP specific factors
CJI96_0001664
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GFIT
Motif
Pfam:
GTP_EFTU
EFG_IV
EFG_C
MMR_HSR1
EFTUD2
Roc
EFG_III
Motif
Other DBs
NCBI-GeneID:
40028348
NCBI-ProteinID:
XP_028890440
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Position
2:complement(467373..470264)
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AA seq
963 aa
AA seq
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MDNEDLYDEFGNFIGGSNDSGSESFSGSDLEPVDEEVSDEEAPHDVDVEQNTDSALVTTD
DLSQRFSGAETIIVEPKQVPENQPVLRADSQKRSHIEFTAESAEDLPETTYSREYMLKLA
NDLPERIRNVAFVGNLHTGKTSLIDSLVLETHPTVTLSKKDMQELKPLRYLDTHVLERGR
GMSIFAHPMTLLLPDHRDRSLVLNILDCPGHPEFDDETQSMLEVADGAVLVLDAVEGLSK
RDKRLITSIMKRNIPFTVVLNKIDRLIIESRLPVSDFYLKLRHIINDINATIHHNEFASL
YKHKKLISPLEGNVVFASNVFQVSFSLKSFGDIYARQLEDGKKPSIQFESLLWGDLYYNE
STRKFAKDKKLGKRTFDHFVSEPLYKLVTYTITTDNKNSKNLSKILWENFRITLKKDQLE
KDPQELLRVTLSRIFGFTRDLVMSISTSVPSPEKADSNNENLPDPAHNEVVATVIKHAFS
SDYGTRFALVKVRKGAISTGDSVKLLFNKEGDSKNVRVGAIRIPAGRYTFTAQRVSAGMF
AYIEGFESINVSTATIYSKNVPSNKMVPLHRVSSGQRSVFKVALEPEYPHELPRLVESLR
KLSLTYISSVIKLEESGEHVLLAPGELYLDIFLHDLRNSFDEYLSIKVSDPMVKFGETSS
EMSATKLPSYGPSKKTHISITAEPFDDRNFSKAVTKGTLDVCQPSRNLSKTLRNEFGWDA
LAARSLWVLGPSDMQQPSTLLDDTISNETDKNTLLSFKEPILKGFKLGVEEGPLCGEPVR
DTKFKILDAVLSSSNISSHGAQITTMTRNAVHTGLLTAAPRLLEPVYRVSIVCTMRSVQA
AQIILDKRRGWIVSEIPIPASPLFELEGFVPVIDSVGLDTDMRLHTQGQAMCLVEFDRWK
VVPGDPLDKNVPMPSLRPVPHESMARDFVMKTRRRKGLSDEPNLQKYIDPSLFSRLRESG
LID
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggataacgaggacttgtatgatgagtttggcaatttcatcggcggctctaatgactcc
gggtctgaatctttctcaggttcggatcttgagccagttgacgaagaggtctctgacgaa
gaggcacctcatgatgttgatgttgaacaaaacacagatagtgccttggtcactactgat
gatctttcacagcgcttttcaggggccgaaaccatcatagtcgagcccaagcaagtacct
gagaatcagcctgtgctcagagcagatctgcaaaagagaagtcatattgaatttacagct
gagagtgcagaggacctaccggaaacgacatactctcgagaatacatgttaaaacttgcc
aacgatttacctgaaagaattcgtaatgttgcttttgtggggaatcttcatactggtaag
actagtttgattgactccttagtccttgaaacccatcctacggtgactttatcaaagaaa
gacatgcaagagcttaaaccattgcgctatctcgatacacatgtgctagaacgaggcagg
ggaatgtccatatttgcacatcccatgactcttttgttgcctgatcatcgcgacagatcc
ctcgtgctcaatattttggactgtccgggccatcctgaattcgacgatgaaacacagctg
atgctagaggtggctgatggagcagttttggtactcgatgcggtggaaggtttatcaaag
cgagacaagagacttatcacgtccattatgaaaagaaatattcccttcaccgtggttctt
aacaagattgaccgtctcataatcgagctgcgtctaccagtttctgatttctaccttaaa
cttcgtcacattatcaacgatatcaatgcaactatccatcacaatgaattcgcactgcta
tataagcacaagaagcttataagtccacttgagggcaatgttgtattcgcatcaaacgtc
tttcaggtgtccttctctcttaaatcgttcggtgatatatacgctcgtcagcttgaagat
ggcaagaagccatcaatccagttcgaaagtcttctatggggtgatttgtactacaatgaa
agcactcgaaagttcgctaaggacaagaaactcggaaagcgcacctttgatcactttgtc
ctggaacctctttacaagttggtaacatatacgattacaacagacaacaaaaatctgaag
aacctctctaaaattttatgggaaaatttcagaataacactcaagaaggatcaactcgaa
aaggatccccaggagttgttgagggtgacattgtctcgaatctttggatttacgagggat
ctagtgatgctgatatcgaccagtgtaccttcaccagagaaagcagattcgaacaatgaa
aacttacctgatccggctcataacgaagtcgttgcaactgtcatcaagcatgctttctct
tctgattatggcactcgattcgctttggtgaaggttcgcaaaggtgctatcagcactggt
gactctgtaaagctattgtttaataaagaaggtgatagcaaaaatgttagagttggagca
atacgaattccagcgggaagatacacttttacggctcaaagagttagtgctggaatgttt
gcctacatcgaaggcttcgagtccatcaatgtttcaacggccacgatttacagtaagaat
gtaccttcaaacaaaatggtgcctttacatagggtatcatcgggtcagcggtccgtgttc
aaggtagctttggagccggaataccctcacgaattaccaagacttgttgagagtcttcgt
aaactcagcctcacttatatatcctccgtcattaagcttgaggaaagtggggagcatgtc
ttgctagctcctggtgaattatacctagatattttccttcacgatttacgcaactccttt
gacgagtacctatccattaaggttagtgatccaatggttaagttcggcgagacaagttca
gagatgtctgcaaccaagttaccatcttacgggccctccaagaagactcacatttcaatt
acagcagaaccattcgacgacaggaactttagtaaggctgtcacgaaaggcacactcgat
gtttgtcagcccctgcgcaacctttcaaagacccttcgaaatgagttcggttgggatgct
ttggcggcaaggtcgttatgggtactcgggcccagcgatatgcagcaaccctctacactt
ctcgatgacacaatcagtaatgagactgataaaaatactctcctctctttcaaagagcct
attttgaagggcttcaagctaggtgtcgaggaggggccattgtgcggcgagcctgttcga
gacaccaagttcaaaatccttgatgcagtgctttcatcctcgaatatcagcagccatgga
gctcaaattacaacgatgacacgtaatgcggtacacactggcttactcacagctgctcct
cgtttgcttgaacctgtttatcgtgtctccattgtctgcacgatgagaagtgtccaagca
gcacagatcattctagacaagaggcgtggatggatcgtttctgagataccgatacccgca
agtccgttgtttgagctcgagggttttgtcccagtcatagactcagttggtttagataca
gacatgaggctacacacacaaggtcaagcaatgtgcttagtggagtttgatcgctggaaa
gtggttccaggagaccctctcgataaaaacgtgccaatgccctcactcagaccggttccg
cacgagtcgatggcaagagattttgtcatgaagactagacggagaaaaggcttgagtgat
gaacctaatttgcaaaagtatattgacccaagccttttctctcgcttgcgagaaagtggt
ctcattgattaa
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