Candidozyma auris: CJI96_0003280
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Entry
CJI96_0003280 CDS
T04850
Name
(RefSeq) hypothetical_protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
caur
Candidozyma auris
Pathway
caur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJI96_0003280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caur03019
]
CJI96_0003280
Messenger RNA biogenesis [BR:
caur03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CJI96_0003280
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
RsgA_GTPase
AAA
AAA_23
AAA_29
AAA_15
AAA_18
Rad17
NACHT
AAA_25
AAA_33
SRP54
AAA_22
AAA_27
ORC-CDC6-like
AAA_28
Motif
Other DBs
NCBI-GeneID:
40025972
NCBI-ProteinID:
XP_028893202
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All DBs
Position
3:1425755..1426723
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AA seq
322 aa
AA seq
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MTQTLAVETTNLTYVFNNKKCGLEDINLQIPWGTTNLLVGPNGAGKSTLLKILAGKTLVK
QGKLRLGGFDPFEFSPTRHEQHNSDINNYISYLGTEWANNEVVKRDIPVKLLISSIGGEA
YRERRDELIQIMDLDPDWSMCSISDGERRRVQLVMGLLKPWKLLLLDEVTVDLDVIVRQN
LLNFLKRECKERGCCVIYATHIFDGLGKNWCDRVIHLNAGRKTDDVDVSKIEFSDDTKEI
EVQKSEEGIINRIKVAMAQSLHPLVLHWLRDDLEERGSREDEKARIAQRQLDWDNARDGH
YFDKDSKIAQYFQATRGRPNKS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgacacagacgctagcagtcgagacaacaaacctcacatatgtgtttaacaataagaaa
tgcggattggaggatattaatttgcaaatcccatggggtaccaccaatcttctcgtggga
cctaacggtgctggtaaatccacgcttttgaagattcttgctggaaaaactctagtgaaa
caaggcaagttgaggcttggagggttcgatccttttgaattctctccgactcgtcacgag
caacataattccgacatcaacaactacatctcgtacttgggcacagagtgggcgaacaac
gaggtagtgaagagagatatccccgtcaagctcctcatatcatcaattggcggtgaagca
tacagggagagacgtgacgagctcattcagatcatggacttggaccctgattggtccatg
tgttctatcagtgatggtgagcgtaggagggtgcaattggtgatgggcttactcaagcca
tggaaattgcttttattggatgaagtgacggtggatttggacgtgatcgtgcgccagaac
ttgctcaatttccttaagagggagtgtaaggagagaggctgttgtgtgatatatgccaca
catatcttcgatgggcttggcaaaaattggtgtgaccgtgtaattcacttgaacgctgga
agaaagacagatgatgttgatgtgagcaagatcgaattctctgacgataccaaggagatc
gaagtgcagaagagcgaagaaggcatcattaatcgaatcaaagtggccatggctcaatcc
ttacatcccttggtgttgcactggcttcgagacgatcttgaggagcgaggcagccgtgaa
gatgagaaagccagaattgcgcagaggcaattggactgggacaatgccagagacgggcac
tacttcgacaaggacctgaagattgcccagtactttcaagccacacgtggccgtcccaac
aagagctga
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