Corynebacterium auriscanis: CAURIC_10570
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Entry
CAURIC_10570 CDS
T09334
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
caus
Corynebacterium auriscanis
Pathway
caus03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CAURIC_10570 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caus03400
]
CAURIC_10570 (pdg)
Enzymes [BR:
caus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CAURIC_10570 (pdg)
DNA repair and recombination proteins [BR:
caus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CAURIC_10570 (pdg)
Prokaryotic type
CAURIC_10570 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WJY73712
LinkDB
All DBs
Position
complement(2387369..2388202)
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AA seq
277 aa
AA seq
DB search
MMSRLRDMVDPMPDSQSPSTKRPSLPRPGSHRAFKGEETPLGTTRRARKINRMLAEAYPD
AHAELDFSNPLELLIATVLSAQCTDVRVNIVTPGLFGRYPDAQAYAEADREELEQIIRPT
GFYHSKANSILGLARAIVDKHDGQVPNNLKDLVALPGVGRKTANVVLGNAFDIPGITVDT
HLGRLARRWRLTDSEDPVQVERDLMDLIERKEWTEFSHRAIFHGRRVCHSRKPACGACLL
ARQCPSFGQAGPINPEEAAQLIKSNDRERLLKLAGFS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctcgtttgcgcgatatggtggatcccatgccggattcccagtcgccgtcgaca
aaacgaccttcactaccccgtcccggaagccatcgggctttcaagggcgaggaaactccg
cttggcaccaccagacgcgcacgcaaaataaaccggatgttggccgaagcctatccggac
gcgcacgccgagttggacttcagtaatccattggaattactgatagccactgtgctctca
gcccagtgtaccgacgtccgtgtgaatattgtcacaccggggttatttgggcgctatccc
gatgctcaagcgtacgccgaggcagatcgggaggagctggagcagatcatccgccccacg
gggttctaccattccaaagcaaacagcattctgggcttagctcgggccattgtagataaa
cacgacgggcaggttccgaataacctcaaggacctggtggccctaccgggagtagggcga
aaaactgccaacgtggtgctgggtaacgctttcgacattccgggaatcacggtcgataca
caccttgggcgcttggcgcgacggtggcggctcactgactctgaggatcccgtgcaggta
gagcgcgacctcatggacctcatagagcggaaagaatggaccgagttctcccaccgggca
attttccacggccgccgtgtttgtcattctcgaaagcccgcgtgcggtgcctgcttactc
gcccgccaatgcccgagcttcgggcaggcaggtccgattaacccagaggaagcggcgcag
ctcattaaatccaacgaccgtgaacgattgctaaaattagcaggattctcatga
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