Corylus avellana (European hazelnut): 132170815
Help
Entry
132170815 CDS
T09426
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132170815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132170815
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
132170815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_15
Arf
AAA
AAA_23
ORC-CDC6-like
nSTAND3
Stereocilin
ATP-synt_ab
AAA_30
Zeta_toxin
AAA_7
Motif
Other DBs
NCBI-GeneID:
132170815
NCBI-ProteinID:
XP_059437914
LinkDB
All DBs
Position
ca2:complement(4148399..4151999)
Genome browser
AA seq
329 aa
AA seq
DB search
MGVEQNSEPAIEINGLRFTYPGIDGHPPAGSTPLIDDFYLTLHAGDRCLLVGSNGAGKTT
ILKILGGKHMVEPHMVRVLGRSAFHDTTLTSSGDLSYLGGEWRREVAFAGFDVPIQMDVS
AEKMIHGVAGIDPQRRAELIKVLDIDLSWRMHKASDGQRRRVQICMGLLKPFKVLLLDEI
TVDLDVLARADLLRFLKRECVERGGTIIYATHIFDGLEDWPSHIVYVAHGKLQIAMPMDK
VKENSKLSLMRTVETWLRKERDEDRKRRKERKARGLPEFNEQTEGSRAIGDPARAAVRAI
NNGWAAGRLHSTVAGEDNFSFSSNSVLRS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcgagcaaaattcagagccagcgatagagatcaacggtctgagattcacctac
ccgggaatcgacggccatccgcctgcgggctccacacctctcatcgacgatttctatctc
accctccacgccggtgatcgctgcctccttgttggatccaatggcgctggtaaaaccaca
attctgaagatattgggagggaagcacatggtggaaccccatatggttcgtgtgcttgga
agatcagcttttcatgacaccacattgacatcttccggtgatctcagctatcttggtggg
gagtggagacgagaagttgcttttgcagggtttgacgttccaatacaaatggatgtttct
gcagaaaaaatgatacatggagttgcagggattgatcctcaaagaagagctgagttaatc
aaggtactggacatcgatctatcatggaggatgcacaaggcatctgatggtcagagaaga
cgagtgcagatttgtatgggtctcctcaagccgttcaaggttcttcttcttgatgagata
acagttgaccttgatgtactagcgagggctgaccttctaaggtttctaaaaagggagtgt
gtagagcgaggtggcacaatcatctatgcaacacatatatttgatggcctagaggactgg
ccatctcatattgtttatgtggctcatgggaagttgcaaatagcaatgcctatggataaa
gttaaggaaaacagcaaattgtcattaatgagaacagttgagacatggctgaggaaagaa
cgagatgaggacaggaagagaaggaaggagagaaaggcacgtggtcttccagaattcaac
gaacaaactgaaggaagccgtgcgataggtgatccggcccgtgctgctgttcgtgcaatt
aacaatggctgggcagcagggcggctgcattctaccgttgccggagaagacaacttttcg
ttcagctcaaatagtgttctgaggtcgtag
DBGET
integrated database retrieval system
