Corylus avellana (European hazelnut): 132170919
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Entry
132170919 CDS
T09426
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like
KO
K12126
phytochrome-interacting factor 3
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04075
Plant hormone signal transduction
cave04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
132170919
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
132170919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cave03000
]
132170919
Transcription factors [BR:
cave03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
132170919
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
132170919
NCBI-ProteinID:
XP_059438059
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Position
ca2:17768130..17770435
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AA seq
486 aa
AA seq
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MLEPTRPTMRSSLATLASMPEDEFVELVWENGQIHMRGRSGRTQKGHSCTTASSLYPSNA
QAENGGNMISNDSTFSGFMGHRDSDLKFTHNNSSPNGYQFNLGPTDSQPRSARGGIPELG
SSRNSSRKGDPSSSQSQASDLLIRLVNSSETQVSVDQHDRRRGALVYFSDLRPAARFQAN
SRSRPTCGRVVSTRVDGLKYYGKDESNPLEAEAAAIEPPSLQNQPQADVFGHRNHKSGDQ
LGGQTSSLAAGKPNINKFAEPPVASSSVRSFGASNDASYSLRRTYEDTEESAYPSEDFTR
EVEEPHQGLTSGTSAKRSRTAQVHNFSERRRRDKINKKMRALKELIPNCNKVDKASMLDE
AIEYLKTLQLQLQIMSMGSSLCIPPMMLPTMMQHMCAPHLTHFSPMGMGIGCNPGGQFPT
SEMPTFQMLGFPGQAFPMSVSHSPFIPLVGMPATQTVVAPGIPGAAAFGEHLASAPLTSS
KDSNQK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaccaacacgaccaacgatgaggagcagtctggctactctagcttctatgcct
gaggatgagtttgtggagctggtgtgggaaaatggtcagattcatatgcgaggtcgatcc
ggtagaacccagaagggtcattcatgcaccactgcttcttccttatacccttccaatgct
caggcagaaaatggaggaaacatgatttcgaatgactccactttctcaggtttcatgggt
cacagggattctgatctcaaatttacccataacaattcttcaccaaatggttatcaattc
aatttgggtcccacagattcccagcctaggtctgcaaggggggggattcccgagcttggt
agctctaggaatagctctaggaagggggacccatcttcctcgcagagccaagcatcagat
ttgcttataagactagtgaattcaagcgagacccaagtgtcagtggatcagcatgataga
aggcgtggggcactagtgtatttttccgacttaagacctgcggctcgttttcaagcaaat
agtcgaagccggccgacatgtggtagagtggtttcaacaagagttgatgggttgaaatat
tatgggaaagatgagagcaacccccttgaggctgaggcagcagcgattgaaccacctagt
cttcagaatcaaccacaggcagatgtttttgggcataggaatcataaatctggcgatcag
cttggaggccaaacatcaagcttagcagctggaaaacccaatatcaacaagtttgctgag
ccacccgttgcatcttcttcagtacgctcgtttggagcttcgaatgacgcatcatattct
ttgaggaggacatatgaggacactgaggagtcggcatatcccagcgaagattttacaagg
gaggttgaagagcctcatcagggtttgacaagcggtacaagtgctaagagaagtcgaact
gcacaagttcataatttctctgaaaggaggcgaagagataaaattaacaaaaagatgcgt
gcattaaaagagctcatacctaattgcaacaaggtggataaagcttcaatgcttgatgag
gccattgagtatttgaaaacccttcagcttcaactacagattatgtcaatgggaagtagc
ctttgtatacctccaatgatgctacctactatgatgcaacatatgtgtgcaccgcatttg
acacatttctctcccatgggtatgggaattggttgcaacccaggaggacagttccctact
tcagaaatgcccacatttcaaatgcttggatttcctggtcaagcatttcccatgtcagtt
tcacattcacccttcattcctttggttggaatgccagctacacaaacagttgtggcgccc
ggcatccccggagctgccgcctttggggaacatcttgcttctgctcccctaaccagttca
aaggattccaatcagaaatga
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