Corylus avellana (European hazelnut): 132181471
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Entry
132181471 CDS
T09426
Name
(RefSeq) ATP-dependent helicase rhp16-like isoform X1
KO
K15083
DNA repair protein RAD16
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cave03400
]
132181471
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
132181471
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
132181471
NCBI-ProteinID:
XP_059450688
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Position
ca5:complement(3641079..3649550)
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AA seq
936 aa
AA seq
DB search
MELRPRRRISKSPIDEASDVEILQLSDDSSIESGSDSEIFVPSDTSDEDEDYGGRGDLDL
NQKPKATTKVDDWEDNGYGFENYDEPSRKRRKKGGEKKTVERGGPSWEGNLVEHGEQVRE
DNAVHHGGVDGNQFTQQGAVEIDFLGLSKKKTYKKRTKNGSKPILMWNLWEEEHERWIDE
NLTKDFDLGCQNEVIIETAEAPPELIMPLLRYQKEWLAWALKQEKSATGGGILADEMGMG
KTIQAIALVLARREIHRICEPDKPSTLPGPSEGLPGIKATLVICPVVAVSQWVSEIDRFT
SEGSTKVLVYHGANRGKNSKHFRDYDFVITTYSIVEAEYRKHMMPPKKKCLYCGRSFYDR
KLSMHLKYFCGPDAVRTEKQSKQARKKGKSVMSNQKMESAEDKMNECDGKKRKGAFKKTS
YQQSKEKDMGIRFGNENSDGVEGSSRGKSFLHAVKWERVILDEAHYIKARHCNTAKAVLA
LESSYKWALSGTPLQNRVGELYSLVRFLRIIPYSYYLCKDCDCRTLDHSSSKECSNCSHS
SVRHFCWWNKYVATPIQIYGNGDGGRRAMILLKHRILKNIVLRRTKKGRAADLALPPRIV
SLRRDTLDIKEQDYYESVYNDSQAQFNTYVQDGTIMNNYAHIFELLTRLRQAVDHPYLVV
YSRTAALRSGNMVNNDNSERVCGICHHPAEDPRVSACEHVFCKTCLIDFCASLGQASCPS
CSKLLTVDLTRNVDDGDQTSKTTIKGFRSSSILNRIQLDDFQTSTKIEALREEIRSMVER
DGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSLPARDAAIKRFTEDPDCKIFLM
SLKAGGVALNLTVASQVFLMDPWWNPAVERQAQDRIHRIGQFKPIRIVRFVIENTIEERI
LKLQEKKELVFEGTIGGSSEALGKLTEEDLRFLFVT
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcgtcctcgaaggcgaatctccaaatctcctatcgatgaagcaagcgatgtg
gaaatactacagcttagtgacgatagctctatcgaatcgggctctgattccgaaattttt
gtgccgtccgataccagtgatgaagatgaagactatggcgggagaggtgatttggacttg
aaccagaaaccaaaagctacaaccaaagttgatgattgggaagataatggttatggattt
gagaattatgatgagccttcaagaaaaaggaggaagaaagggggagagaagaaaacagtg
gagcgtggaggaccgagttgggaagggaacttggtggagcatggagaacaggttcgggaa
gataatgcagtgcatcatggaggtgtagatggtaaccaatttactcagcaaggagctgtc
gaaattgatttccttgggctgagcaagaagaagacatacaaaaagaggacaaaaaatggt
tcaaagccaatccttatgtggaatctatgggaagaagagcacgagagatggattgatgaa
aatttgacgaaagattttgatttgggttgtcagaatgaagtgataattgaaactgctgag
gctccgcctgaattgatcatgcccttgctaagataccaaaaggaatggttggcttgggct
ttgaaacaggaaaagtctgcaacaggagggggaattcttgcggacgagatggggatgggg
aagaccattcaagcaattgcacttgtccttgccagacgggaaatccacaggatttgtgaa
cctgataaaccctctacattaccaggtccatccgaaggtttgcctggaattaaagccacc
cttgtaatttgtcctgtggttgctgtgagccagtgggtgagtgagattgatcggtttact
tcagagggaagcaccaaggtgcttgtttatcatggggccaatagagggaagaattctaaa
cacttcagagattatgattttgtcataacaacatactctattgttgaggctgagtacaga
aagcacatgatgcctcccaagaagaagtgcctttactgtggcaggtcattttatgatagg
aagctgtcaatgcacttgaaatatttttgtgggcctgatgctgttagaacagagaagcaa
tctaaacaagccaggaaaaaagggaaaagtgtaatgtcaaatcagaaaatggaatctgct
gaagacaagatgaatgaatgtgatggcaagaaaaggaagggagcttttaagaagacatca
taccagcaaagcaaagagaaggatatgggaattagatttggaaatgaaaattcagatggt
gtcgaaggttcttccagagggaaatcctttttgcatgctgtgaaatgggaacgtgtaatt
ctggatgaggcacattatataaaagctagacattgtaatacagcaaaagctgttcttgct
ttagagtcttcatacaaatgggctttaagtggtactccccttcagaaccgtgttggagaa
ctttactctttggttcggttcctgcgaataattccgtactcttattacttgtgtaaagac
tgtgattgcagaacacttgatcatagttcttcaaaagaatgttcgaactgttctcatagt
tcggtgaggcatttttgttggtggaataaatatgtggctacaccaatacaaatatatgga
aatggtgatgggggacgaagagccatgattttgctcaaacacagaattttaaagaacata
gtgctaagacgcacaaaaaaaggcagggctgctgacctggcacttccccccagaattgtt
tcattgaggcgggatactttggatatcaaagaacaagattattatgaatcagtgtacaat
gacagtcaggcacagttcaatacatatgttcaggacggaaccataatgaataactacgct
cacatatttgagcttctcacacgcttgcggcaggcagtggatcatccttaccttgtagta
tattctagaactgctgcactaagaagtggaaacatggttaataatgacaatagtgaacgc
gtttgtggtatttgtcaccatccagctgaagatcctagggtctctgcttgtgagcatgtt
ttctgtaagacttgtctgattgatttttgtgcttccttgggacaagcctcatgcccctca
tgttcgaaattacttactgttgatttgactagaaatgtggatgatggagatcagacttct
aaaacaaccatcaaggggttcagatcctcaagtattctgaacagaattcaacttgacgat
tttcagacaagcacaaaaatagaggctttgagggaagaaattaggtccatggttgaaagg
gatggttccgcaaaagggattgttttcagccagttcacatcattcttggatcttataaat
tattcccttcacaagtccggtataaattgtgttcaattagttggaagcatgtccttacct
gcaagagatgcggctatcaagaggtttactgaagacccagattgcaagattttccttatg
agcttgaaagctggcggtgttgctctgaatcttacagttgcatcacaagtcttcttgatg
gatccttggtggaacccagctgtggagcggcaagcacaagatagaatccaccgaataggg
cagtttaaaccaatcagaattgtgagatttgttattgagaatacaattgaggagaggatt
ctgaagctgcaagaaaagaaggaattagtgtttgaagggaccataggtggctcttcagag
gccctcggaaaattaactgaagaagacttgagatttctatttgttacctga
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