Corylus avellana (European hazelnut): 132181473
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Entry
132181473 CDS
T09426
Name
(RefSeq) ATP-dependent helicase rhp16-like isoform X1
KO
K15083
DNA repair protein RAD16
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cave03400
]
132181473
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
132181473
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-Di19
Motif
Other DBs
NCBI-GeneID:
132181473
NCBI-ProteinID:
XP_059450691
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All DBs
Position
ca5:complement(3656134..3675596)
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AA seq
932 aa
AA seq
DB search
MEPRPCSRRRISNAPFDGATSVEVLQISDDSSDEEGSDLEIYVPSNARDGDEEYGGEMDL
DLNQKPKDIMEVNDGEDGDYNFKDYDKPWTKNRKAGPDMKTVVEHGEPSCEENMAEYGGP
VWEENAVHCGGIDGNQFTQEGVVEIDFLRLSEMKTCEERTSGAKPMLMWNQWEEEHERWI
DENLTKDFDLDHQNEVIRETAEAPPELIKALYKHQKEWLAWALKQENSSTKGGILADEMG
MGKTIQAIALILAKRQVHRMICEPDEPSVLPGPSKGLPGIKATLVICPPVAVSQWKSEIG
QFTSEGSTKVLVYHGANREKNSEQFREYDFVITTYYIVGTEYRKCMMPPKKKCPYCRKSF
YDSELSVHLKYCGPDAVRTKKQSQQARKKWKTVMSNQKMESAEDKMNECDGKKGEGTFKK
TSYQQSKEKDMGIRFGNENSDGVEGSSRVKSPLHAVKWERVILDEAHYIKARHCHTAKAV
FALESSYKWALSGTPLQNHIGELYSLVRFLQIIPYSYYLCKDCDCRILDHSSKDCSNCSH
SSVRHFCWWNKYVATPIQRYGNGDGGRRAMVLLTRKILKNIVLRRTKADLALPPRIVSLR
WDTLDIKEQDYYEAIYNESQAQFNTYVQAGTLMNNYAHIFELLTRLRQAVDHPYLVVYSR
TAALRSGNMVNNDNSERVCGICHHPAEDPRDTASEHFLLNAVLIGVYASLGQAFCSSCSN
LFTVDSPKNGDGDHASKTTIKGFRSSSILNRIQLDDFQTSTKIEALREEIRFMVERDGSA
KGIVFSQFTSFLDLINYSLHKSGVNCVQLDGTMSMSARDAAIKRFNEDPDCKIFLMSLKA
GGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQHKPTRIVRFVIENTIEERILKLQ
EKKELVFEGTIGGSSEALGKLTEEDLRFLFVI
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcgtccttgtagtcgtagacgaatatctaacgctcctttcgatggagcaacc
agtgtggaagtgcttcagattagtgatgatagctctgacgaagagggctctgatttggaa
atttatgtgccgtcgaatgctcgtgatggagatgaagaatatgggggggaaatggatttg
gacttgaaccagaaaccaaaagatataatggaggttaatgatggggaagatggtgattat
aatttcaaggattatgataagccttggacaaaaaataggaaggcaggaccagatatgaaa
acagtggtggagcatggagaaccgagttgtgaagagaatatggcggagtacggaggaccg
gtttgggaagagaatgccgtgcattgtgggggtatagatggaaatcagtttactcaagaa
ggtgttgttgaaattgatttcctcaggctgagcgagatgaaaacatgtgaagagaggaca
agcggtgcaaagccaatgctaatgtggaatcagtgggaagaagagcacgagagatggatt
gatgaaaatttgacgaaagattttgatttggatcaccagaatgaagtgattcgtgaaact
gctgaggcaccgcctgaattgatcaaggcattgtacaagcaccaaaaggaatggttggcc
tgggctttgaaacaggaaaactcttcaactaaagggggaattcttgcggatgagatggga
atggggaagacaattcaagcaattgcacttatccttgccaaacggcaagtccacaggatg
atttgtgaaccagatgaaccctcagtattaccaggtccatccaaaggcttgcctggaatt
aaagccacccttgtaatttgtcctccagttgctgtgagccagtggaagagtgagattggt
cagtttacttcagagggaagcaccaaggtgcttgtttatcatggggccaatagagagaag
aattctgaacaattcagagaatatgattttgtcataacaacatactatattgttgggact
gagtacagaaagtgcatgatgcctcccaaaaagaagtgcccttactgtcgcaaatcattt
tatgatagtgagctgtcagttcacttgaaatattgtgggcctgatgctgttagaacaaag
aagcagtctcaacaagcaaggaaaaaatggaaaactgtaatgtcaaatcagaaaatggaa
tctgctgaagataagatgaatgaatgtgatggcaagaagggagagggaacttttaagaag
acatcataccagcaaagcaaagagaaggatatgggaattagatttggaaatgaaaattca
gacggcgttgaaggttcatccagagtgaagtcacctttgcatgctgtgaaatgggaacgt
gtaattctggatgaggcccattatataaaagctagacattgtcatactgcaaaagccgtt
tttgctttagagtcttcatacaaatgggctttaagtggcactccccttcagaaccatatt
ggagaactttactctttggttcgcttcctgcaaataattccatattcttattacttgtgt
aaggactgtgattgcagaattctagatcatagttcaaaagactgttcaaactgttctcat
agttctgtgagacatttttgttggtggaataaatatgtggctacaccaatacaaagatat
ggaaatggtgatgggggacgaagagctatggttttgctcacgcgcaaaattttaaagaac
atagtgctaagacgcacgaaagctgatctcgcacttcctcctagaattgtttcattgagg
tgggataccttggatatcaaagaacaagattattacgaagcaatatacaatgaaagtcag
gcacagtttaatacatatgttcaggcgggaactttgatgaataactacgctcacatattt
gagcttctgacacgcttgcggcaggcagtggatcatccttacctcgtagtatattctaga
actgctgcactaagaagtggaaacatggttaataatgacaatagtgaacgagtttgtggt
atttgtcaccatccagctgaagatcctagggatactgcttctgagcattttttattaaat
gctgttttaattggtgtctatgcttccttgggacaagccttttgctcttcatgttcaaat
ttatttactgttgattcacctaaaaatggggatggagatcatgcttctaaaactaccatc
aaggggttcagatcctcaagtattctgaacagaattcaacttgacgattttcagacaagc
acaaaaatagaggctttgagggaagaaattaggttcatggttgaaagggatggttctgca
aaaggaattgttttcagccagttcacatcattcttggatcttataaattattccctccac
aagtctggtgtcaattgtgttcaattagatggaaccatgtccatgtctgctagagatgct
gctatcaagaggtttaatgaggacccagattgcaagattttccttatgagcttgaaagct
ggtggtgttgctctgaatcttacagttgcatcacatgtcttcttgatggatccttggtgg
aacccagctgtggagcggcaagcacaagatagaatccaccgaatagggcagcataaacca
accagaattgtgagatttgttattgagaatacaattgaggagaggattctgaagctgcaa
gaaaagaaggaattagtgtttgaagggactataggtggctcttcagaggccctcggaaaa
ttaactgaagaagacttgagatttctatttgttatctga
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