Corylus avellana (European hazelnut): 132186813
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Entry
132186813 CDS
T09426
Name
(RefSeq) transcription factor PIF3 isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04075
Plant hormone signal transduction
cave04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
132186813
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
132186813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cave03000
]
132186813
Transcription factors [BR:
cave03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
132186813
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
132186813
NCBI-ProteinID:
XP_059456869
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Position
ca7:complement(206331..212037)
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AA seq
744 aa
AA seq
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MMPLSELYRMAKGKLDSIREKNTTCSTDLSFLPEDDLFELVWENGQILKQGQSSRPRKIP
TTNSLPSHTPKTRDKDIGNGTSSKMGKFGGMDSILDEIPMSVPSDEMDLSQDDDMMPWLN
YPIDEPLQHEYCSDFLPELSGVTVIELSAQNNLASIDKRSSCNMVYRDCHTDSVNDGVNL
RHGHGDVSKVSSVGGGEATRPRNSSFPLYPSSSQQCQTSLPSLRSRVSDVTGNNMSNAMH
HAVCGDSTRVASAAGGFPTIKMQKKDPMPPSSNSNLMNFSHFSRPAALVKANLENIGLMA
ASGLSSMERMARKEKGSAASSENPPESTLVTSSSGLRRESSSHCQPVAVPLKVDLKPLGE
KPVEEPIATKQSEAVCQGDACKNDKSFNQVLGESATKGLPDGEKPIEPLVASSSVCSGNS
VERASDDPTHSLKRKYRDTEESECHSEDVEEESMGTKKAVPARGGVGSKRSRAAEVHNLS
ERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMSPMM
LPTGMQHMGAPHMAHFSPMGVGMGVGLGMGYGMGMPDINGGSSGYPMIQVPPMQGAHFPG
PHMSGHTALHGMAGSNLQMFGLPGQGLLMSMPRAPLIPLSGGPLMKSAMGLNACGVVGPL
ENVDSVPASSSKDPMQNVNSQVIQSNGANSSMCETSSQCPATNAGFERSSLVQSNRQASE
VTGNAAINSANGNDLVRRRPACYD
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctctgtccgagctgtatcgaatggctaaagggaagcttgattctattcgagag
aagaacaccacatgttcgactgatctatcttttcttcctgaggatgacctttttgagctg
gtgtgggaaaatggtcagattttgaagcaaggtcagtccagtagacctagaaagatccca
actactaacagcttaccatctcacacccctaagacaagagataaagatataggaaatggc
accagttcaaagatgggaaagtttgggggaatggactctatattggatgaaatcccaatg
tcggtgccatcagatgaaatggatttgagtcaagatgatgacatgatgccttggttgaat
tatccaattgatgaacctttgcaacatgagtattgttctgatttcttgcctgaattatct
ggggtgactgtaattgaactatctgcccagaataatttggcatctattgacaaaagaagt
agttgtaatatggtgtatagggattgccatactgattctgtaaatgatggtgtgaattta
agacatgggcatggggatgtgtcaaaggtttcttcagtcggtggtggtgaggccacaaga
cctagaaacagtagttttcccttatacccatcgtcttcacagcaatgccaaacatcattg
ccatcccttagatcaagggtttcggatgtcactggcaataatatgagcaatgcaatgcac
catgctgtttgtggggattcaacacgggttgcatctgctgctggtggatttcctaccata
aagatgcagaagaaagatccaatgccgcctagcagtaactccaatctgatgaatttctct
catttctcacgacctgctgctcttgtgaaagctaatcttgagaacattggcctaatggct
gcttcaggtctatcaagcatggaaaggatggcaaggaaggagaaaggttctgctgcaagt
agtgaaaaccctcctgaatcaacacttgtcacttcaagtagtggtttacggagagaatca
agttcccattgccaaccagttgcagtgccattgaaggttgatttaaaacccttgggggag
aagcctgtggaggaaccaattgccactaaacaatctgaggctgtttgtcaaggggatgcc
tgtaagaatgacaaaagctttaatcaagtccttggtgaaagtgcaactaaaggactgcca
gatggtgagaagcccatagagcctctagttgcttcttcttctgtttgctcaggcaatagt
gtggagagagcttcagatgatccaacacatagtttgaagagaaaatatcgtgacactgaa
gaatctgaatgccatagtgaagatgttgaggaggaatcaatgggtacgaaaaaagcagtt
cctgcccgagggggtgtgggttctaagagaagccgagcggcagaagtgcataacttatct
gaaaggaggcgaagagataggatcaatgagaagatgcgtgctttacaagaactcatacca
aactgcaataaggtggacaaagcttcaatgctcgatgaggccattgagtatcttaagaca
cttcaacttcaagtgcaaattatgtccatgggagctggtttgtatatgtcaccaatgatg
ctaccaacaggaatgcaacacatgggtgcacctcacatggcccatttctctccaatgggt
gttggaatgggagtgggactgggaatgggttatgggatgggtatgcctgacattaatggt
ggatcttcgggttaccctatgattcaggtgccccccatgcaaggagcacatttccctggg
ccgcatatgtcaggacacactgctttgcatgggatggcaggatctaaccttcagatgttt
gggcttcctggtcaaggacttctcatgtcgatgccacgtgcacccttaattcctttgtcg
ggagggcctcttatgaagtcagccatgggactgaatgcctgtggggttgtaggtcctttg
gaaaatgttgattcagttccagcatcaagctcaaaggatccgatgcagaatgtcaattct
caagtgattcaaagcaatggtgccaatagctcaatgtgtgagacatctagtcagtgtcca
gcgacaaatgcaggatttgagcggtcctctttggtgcaaagtaatcgtcaagcctcagaa
gttactggcaatgcagctattaactctgcaaacggaaatgaccttgtgcgtagaagacca
gcttgctatgattga
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