Corynebacterium argentoratense: CARG_03925
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Entry
CARG_03925 CDS
T02821
Name
(GenBank) hypothetical protein
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
caz
Corynebacterium argentoratense
Pathway
caz03030
DNA replication
caz03410
Base excision repair
caz03420
Nucleotide excision repair
caz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
caz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CARG_03925
03410 Base excision repair
CARG_03925
03420 Nucleotide excision repair
CARG_03925
03430 Mismatch repair
CARG_03925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caz03032
]
CARG_03925
03400 DNA repair and recombination proteins [BR:
caz03400
]
CARG_03925
Enzymes [BR:
caz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CARG_03925
DNA replication proteins [BR:
caz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CARG_03925
DNA repair and recombination proteins [BR:
caz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CARG_03925
NER (nucleotide excision repair)
GGR (global genome repair) factors
CARG_03925
MMR (mismatch excision repair)
DNA ligase
CARG_03925
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CARG_03925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
Nlig-Ia
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
Auto_anti-p27
Motif
Other DBs
NCBI-GeneID:
16729571
NCBI-ProteinID:
AGU14932
UniProt:
U3GZ32
LinkDB
All DBs
Position
778358..780484
Genome browser
AA seq
708 aa
AA seq
DB search
MSQAPHNDSQLRRQWDELAEKVRYHREQYYNGEPSIPDADFDALFRELEQLERDHPELAV
PDSPTKQVGAPVPEQSTFDNVEHLERMLSLDNVFDEAELGEWLARTPAEKYLCELKIDGL
SLDVIYRNGVLERAATRGDGRVGEDVTVNAKTITDLPHELHGSDDFPIPEVLEVRGEVFI
SVADFADVNAARIEETATEKNPQGRPFANPRNAAAGSLRQKDVEQVRRRKLRMICHGLGH
CEGFTPTSQHEAYQALEAWGLPVSPYTELVDAADVPDRVKYWAEHRHDALHEMDGLVIKV
DNIAEQRDLGATSRAPRWAIAYKYPPEEVTTKLVDIQCGVGRTGRITPFAIMEPVYVAGS
TVEMATLHNQYEVQRKGVLIGDTVVLRKAGEVIPEVLGPVVELRDGSETPFVFPTTCPSC
GTPLAPQKEDDKDWRCPNSRSCPAQLSARLTYLASRSGFDIEALGEKGARDLIESGVLSD
EAGLFDLDEQALQRTLAYTKGSARDRDKVRARRAEDPTFVYEGELNANGRKLLKNLEEAK
NTELWRVLVSLSIRHVGPTAARALADKYHSLPALIDAPVDDLAQIDGVGEIIAASFKQWF
EVDWHRVIVDRWAASGVTMEEEVGEQLPQTLEGLTVVVTGSLEGFTRDGAKQAIVERGGK
AAGSVSKKTDFVVVGENAGSKEAKARDLGLPILDEAGFVRLLDNGVED
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggccccccacaacgacagtcagctccgccgacaatgggacgaacttgcggaa
aaagtccgctaccaccgagagcagtactacaacggtgaaccatcaatccccgacgcggat
ttcgacgcattgttccgcgaactggagcaactcgaacgtgaccaccccgagcttgctgtt
cccgatagccccaccaagcaggtcggcgcacctgtaccagagcaatccacctttgacaac
gtcgagcacctcgagcgcatgctcagcctggacaacgtgtttgacgaggccgaactaggg
gagtggctagcccgtacacccgcggagaagtacctgtgcgagctgaaaatcgacgggttg
tccctcgacgtcatttaccgcaacggtgtgctcgaacgcgcagccacccgcggcgacggg
cgcgtgggtgaagatgtcacagtcaacgccaaaactatcactgacctgccgcacgagctg
cacggctccgatgactttcccatcccggaggtcctcgaggtgcgcggtgaggtctttatc
agcgtcgccgattttgccgacgtgaatgcagcgcgtatcgaagaaacggccaccgagaaa
aacccacagggccgcccctttgccaacccgcgtaacgcagccgccggaagcttgcggcaa
aaagacgtcgagcaagtccgccgtcgaaaactgcgaatgatctgccacggcctcggccac
tgcgagggcttcacccccacttcgcaacatgaggcctaccaggcgctcgaagcatgggga
ctacccgtcagcccctacaccgaacttgttgacgccgcggacgtgccggaccgcgtgaag
tactgggccgaacatcgccatgatgccttgcatgaaatggatggcctggtgatcaaggtc
gataatattgccgagcagcgggacctaggggcaacctcccgcgcgccgcgttgggctatc
gcctataaatatccgccggaggaagtaaccaccaagctcgttgatatccagtgcggtgtg
ggcagaaccggccgcatcacgccttttgccatcatggaaccggtgtatgtggccggctcc
accgtagagatggcgactttgcacaaccagtatgaggttcagcgcaaaggcgtactcatc
ggagacacggtcgtgctgcgcaaagcgggcgaggttattcccgaagttctgggcccagtt
gttgagcttcgtgacggcagtgaaacgcccttcgttttccccaccacttgtccttcttgt
ggcactcccttggccccgcaaaaagaagatgacaaagactggcgttgccccaatagccgt
tcctgcccagcacaactgtccgcacgcttgacctacctggcgagccgcagcggattcgac
atcgaagccctgggggagaagggtgcgcgcgacctgattgagtccggagtcctttcggat
gaagcggggttgttcgatcttgatgagcaagccttgcagcgcaccctggcctatacaaaa
ggcagtgcgcgcgatagggacaaggttcgggcgcgacgggccgaagaccccacctttgtg
tacgaaggcgagctcaacgctaacgggcgtaagttgctcaaaaacctcgaggaagctaaa
aatacagaactgtggcgggtgctggttagcctgtcgatcaggcacgtcggtcccacggct
gctcgtgctttggcggacaagtaccacagcctccccgcgcttattgacgccccggtggac
gatctcgcgcagattgatggggtgggggagatcatcgcggcgtcattcaagcaatggttt
gaagttgattggcatcgtgtgatcgtcgaccgttgggctgcaagtggtgtgaccatggag
gaagaggtcggcgagcagctgccccagaccctggaggggctgactgttgtggtgacgggg
tccctcgagggctttactcgtgatggtgccaagcaggcgattgttgagcgcggtggtaaa
gctgccgggtcggtgtcgaagaagacggacttcgtggtggtgggcgaaaatgcgggttcg
aaggaggctaaagctcgtgacctgggcctgccgattctggacgaggctgggtttgtgcgc
ctgcttgacaatggtgtggaggactag
DBGET
integrated database retrieval system
