Clostridium botulinum A ATCC 19397: CLB_0408
Help
Entry
CLB_0408 CDS
T00574
Name
(GenBank) DNA-binding response regulator
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
cba
Clostridium botulinum A ATCC 19397
Pathway
cba01502
Vancomycin resistance
cba02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cba00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CLB_0408
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CLB_0408
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cba02022
]
CLB_0408
01504 Antimicrobial resistance genes [BR:
cba01504
]
CLB_0408
Two-component system [BR:
cba02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
CLB_0408
Antimicrobial resistance genes [BR:
cba01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
CLB_0408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
cREC_REC
Motif
Other DBs
NCBI-ProteinID:
ABS33557
LinkDB
All DBs
Position
417133..417831
Genome browser
AA seq
232 aa
AA seq
DB search
MSAEKILIVDDEKEIRDLIDIYLTNEGYITLKSSNGIEALELLKTNNVHLIILDIMMPKM
DGIEACMKIREEKSMPIIMLSAKSEDMDKIIGLTTGADDYITKPFNPLELLARVKSQLRR
YIKLNNSNGNENEDIVTIEDITINVATHEVKIGDQPVRLTPREFDILELLARNRGVVFSI
EKIYELVWKEEFLDSNNTVMVHIRKLREKIEQNPRNPRYIKTVWGVGYKVEK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagaaaaaatccttattgttgatgatgaaaaagaaatcagagatttaatagat
atatacttaaccaatgaaggttatataactttaaagtcatctaatggtatagaggcatta
gagcttttaaaaactaataatgttcatcttataatattagatataatgatgcctaagatg
gatggtatagaagcttgcatgaaaataagagaagaaaaaagtatgcctataataatgctt
tcagctaagagtgaagatatggataaaataataggattaaccacaggtgcagatgattat
ataacaaagccttttaatcccttagaacttttagctagagttaaatctcagttgagaaga
tatataaagcttaataattcaaatggaaatgaaaatgaagatattgttactatagaggat
ataactataaatgtagcaactcatgaggttaaaattggagatcagccagttagacttaca
ccgagagaatttgatattttagagctactggctagaaatagaggagtagtgtttagtata
gaaaagatatatgaattagtatggaaagaagaatttttagactctaataatacagtaatg
gttcatataagaaaattaagagaaaaaatagaacaaaatcctagaaatccaagatatata
aaaacagtttggggagttgggtataaggttgaaaaatag
DBGET
integrated database retrieval system
