Serpentinimonas raichei: SRAA_0533
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Entry
SRAA_0533 CDS
T03614
Symbol
nth
Name
(GenBank) predicted EndoIII-related endonuclease
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cbaa
Serpentinimonas raichei
Pathway
cbaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cbaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SRAA_0533 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbaa03400
]
SRAA_0533 (nth)
Enzymes [BR:
cbaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SRAA_0533 (nth)
DNA repair and recombination proteins [BR:
cbaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SRAA_0533 (nth)
Prokaryotic type
SRAA_0533 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BAO80387
UniProt:
A0A060NH64
LinkDB
All DBs
Position
complement(532527..533204)
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AA seq
225 aa
AA seq
DB search
MKPEHIEPFFAALAAAKPEPKTELEYKSDFELLCAVLLSAQATDVSVNRATRTLFAVAAT
PAQMLALGLEGLQAHIQSIGLYRSKARHLLQSCQMLIERHGGQVPRTRAELEALPGVGRK
TANVVLNEAFGEPTLAVDTHVFRLANRTGLAPGRTPLQVEQGLLARIPPAYLRHAHHWLI
LHGRYVCKARQPLCDQCRVAAWCDTWAERGAERGAKPDTKPSANP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagaacacatcgagccgttctttgccgcactggcggcggccaagcccgagccc
aaaaccgagctggagtataagagcgacttcgagctgctgtgcgcggtgctgctgagcgcg
caggccaccgacgtgagcgtaaaccgcgccacccgcaccctgtttgccgtcgccgccacc
ccggcgcagatgctggcgctggggctcgaagggctgcaagcgcacatccagtcgattggg
ctgtaccgcagcaaggcgcggcacctgctgcaaagctgccagatgctgatcgagcgccac
ggcgggcaggtgccgcgcacccgcgccgaactcgaagccctgcccggcgtcgggcgcaaa
accgccaacgtggtgctcaacgaggcgtttggcgaacccacgctggcggtggatacgcac
gtgttccggctcgccaaccgcaccgggctggcaccggggcgcacgcccttgcaagtggag
cagggtttgctggcgcgcattccgccggcgtatttgcgccacgcgcaccactggctgatc
ttgcatgggcgctatgtttgcaaagctcgccagccgctgtgtgaccagtgccgcgtggcg
gcttggtgcgatacttgggccgagcgcggggccgagcgcggggccaagcccgacaccaaa
cccagcgcaaacccatga
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