Chitinophaga caeni: COR50_03280 Help Entry COR50_03280       CDS       T05360                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism cbae  Chitinophaga caeni Pathway cbae03030   DNA replication cbae03410   Base excision repair cbae03420   Nucleotide excision repair cbae03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cbae00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     COR50_03280    03410 Base excision repair     COR50_03280    03420 Nucleotide excision repair     COR50_03280    03430 Mismatch repair     COR50_03280  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cbae03032]     COR50_03280    03400 DNA repair and recombination proteins [BR:cbae03400]     COR50_03280 Enzymes [BR:cbae01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      COR50_03280 DNA replication proteins [BR:cbae03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      COR50_03280 DNA repair and recombination proteins [BR:cbae03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      COR50_03280    NER (nucleotide excision repair)     GGR (global genome repair) factors      COR50_03280    MMR (mismatch excision repair)     DNA ligase      COR50_03280   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       COR50_03280 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 Nlig-Ia PTCB-BRCT HHH Auto_anti-p27 Motif Other DBs NCBI-ProteinID:  ATL46270 UniProt:  A0A291QQN5 LinkDB All DBs Position 805738..807852 Genome browser AA seq 704 aa AA seqDB search MTYNKDTELALSQAAKQLLSLLAQGKLLENVHKTVDTLKDVLRYNDWRYYVQNDPVVSDY EYDQLFTWLKKLETENPELVTPDSPTQRVAQGLTKEFPTVQHLVPMLSLDNSYNADDLFD WDRKAREITKLDEIEYCIEPKFDGASISLIYENDLLVRGATRGDGVEGEDITTNIKQIRS IPLSAKFSDYGIQTIELRGEVLINKETFEKFNEHRAAENLPPLANPRNAASGSLRMVDPK EVAKRGLEAFLYHMSYHNMFPGKAESPEISTHSNTLDLLTSLGFRSPAKEKKVVKGIQAV VDYCLAFEEGRDALPYEIDGMVIKVNDYALQDLLGMTTHHPRWAIAYKFKARQATSILKE VEFQVGRTGAITPVAKIDPVPIGGVTVGSISLFNEDVIREKDLMIGDTVLVERAGDVIPY IVKSLADLRKGSEKPIIFPKECPVCHDPLMKPEGESVWRCININCEAQVVERMIHFVSKD AMDIKSFGESNVRKFYTLGLLKDIPGIYTLDFEQISQLEGFGKKSITNLESAIEASKKQP LHRLIFGLGIRYVGETTAKTLANAVNELMALANFTEEQLLALEDIGPKVAGAVKAFFDNE DNLSMLAKLAELGINMKGVKGSFDHTEGALAGQTFLFTGTLSKLKRSDAEEMVEAQGGKI LSGVSSKLNYLVVGEDAGSKLEKAKKINSVKILTEDEFLDLMPS NT seq 2115 nt NT seq  +upstreamnt  +downstreamnt atgacttacaataaagatactgaacttgcgctgtcgcaagcggcaaaacaattgttatcc ttgctcgcccaaggtaaacttttagaaaacgtccacaaaaccgttgatacattaaaggat gtattgcggtacaacgattggcgttattatgttcaaaatgaccccgttgtttccgattac gaatatgaccaattgtttacctggttaaaaaaattagaaaccgaaaatcccgagctcgtt acacccgactcccccacgcaaagggtagcacaaggtttaacgaaggaattccctacagtt cagcacctcgtaccgatgttgagcctggataactcttacaatgcggatgatttattcgat tgggacaggaaagccagggaaatcacgaagctcgacgagatagaatattgcatcgagccg aagtttgatggcgccagtatttcattgatctatgaaaatgatctcctggtaaggggagca acaaggggtgatggtgtagagggtgaagatattacgacgaatatcaagcaaatccggtct attcctttatcagccaaattttcagactacggtatccaaactatagagttgcgtggcgag gtattaatcaacaaggaaacattcgagaaattcaacgagcacagggcggctgaaaatctt cccccattggcgaaccctaggaatgctgcttccggttcattgaggatggtggatcccaag gaagttgccaaaaggggattggaagcatttttataccatatgagttaccataacatgttt cccggcaaagcggaaagcccggaaatcagcacccacagtaatactttggacctgcttact tctttaggattccgcagtcctgccaaagaaaagaaagtagtgaaaggtatacaagcagta gtagattattgcctggccttcgaggaaggccgcgatgctttgccttacgagattgacggg atggttattaaagtgaatgattatgctttgcaggatttgttgggcatgactacgcatcac ccgcgctgggccatcgcctataaattcaaagcccgccaagccaccagtatattaaaagaa gtggaattccaagttggtcgaacaggcgctattacacccgtggcaaagattgatccagtt cccataggtggcgttaccgtaggctctatttcactgtttaacgaagatgtgatccgcgaa aaggatttgatgattggggataccgtgttggtagaaagggccggagatgtaattccatat atcgtgaaatcgttggccgatctgaggaaaggcagcgaaaaacctatcatctttccaaag gaatgcccagtatgccatgaccccttgatgaaaccggaaggggagagtgtttggcgatgc atcaatattaattgcgaagcccaagtggtggaaaggatgatacatttcgtcagcaaggac gcgatggatatcaaaagttttggagaaagcaatgtgcggaaattttatacactcggtttg ctaaaagatattcccggtatttacaccttggactttgagcaaatatcgcaactggaaggc ttcgggaaaaagtctataaccaacctggaaagcgccatcgaagcatcgaaaaaacaacca ttacaccggctaatcttcggtttgggcatcaggtacgtcggggaaacaaccgctaaaaca ctggccaatgctgtaaatgaattgatggccttagccaatttcaccgaagaacaattactc gcattggaagatatcggcccgaaggtagcaggtgccgtaaaagcgttcttcgataatgaa gataacctatccatgctggcgaaattagccgaattgggcatcaatatgaaaggggttaaa ggaagttttgaccataccgagggcgccttagcaggacaaacatttctatttaccggcacc ttatctaagctgaaaagaagcgatgccgaagagatggtcgaagcacaaggcggcaaaata ttaagtggcgtaagtagcaagttaaactacctggttgttggcgaagatgccggcagcaag ctagaaaaagccaagaagatcaacagcgttaaaatattaactgaagacgaatttttagac ttaatgccttcctga

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