Chitinophaga caeni: COR50_20770
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Entry
COR50_20770 CDS
T05360
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
cbae
Chitinophaga caeni
Pathway
cbae01501
beta-Lactam resistance
cbae01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cbae00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
COR50_20770
01503 Cationic antimicrobial peptide (CAMP) resistance
COR50_20770
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbae02000
]
COR50_20770
01504 Antimicrobial resistance genes [BR:
cbae01504
]
COR50_20770
Transporters [BR:
cbae02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
COR50_20770
Antimicrobial resistance genes [BR:
cbae01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
COR50_20770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
DUF5435
Motif
Other DBs
NCBI-ProteinID:
ATL49413
UniProt:
A0A291QZZ2
LinkDB
All DBs
Position
complement(4959422..4962586)
Genome browser
AA seq
1054 aa
AA seq
DB search
MLRKFIERPVLATVVSIILVLLGGLSLVSLPVTQFPDIAPPSVQVQASYPGANAEVVARS
VATPIEEAVNGVENMTYMTSTSNNDGSMILTVYFKLGTDPDMAAVNVQNRVSKATSLLPT
EVVQAGITTQKQQNSMIMVVNLQSDNKAYDETFLQNYAKINIIPEMQRINGVGQAMVFGA
KDYAMRIWLRPDRLAAYNMSPQDVLNAIREQNVEAAPGRFGENTSESFEYVIKYKGKLNK
GEQYENIILRANPDGSLLRLGDVARVEFGSFTYSNDTKVNGKYGIGIALYQTAGSNANDI
QVAVNELMQKASKAFPADVEYFNIYSTKEYLDESIDQVKHTLIEAFILVFIVVFIFLQDF
RSTLIPAIAVPVAIIGTFFFMQLFGFTINLLTLFALVLAIGIVVDDAIVVVEAVHAKMER
INMSPKDATISSMQEISGAIISITLVMSAVFIPVGFMQGPAGVFYRQFAFTLAIAILISA
VNALTLSPALCALLLKNNHAAGEGGHVEKKGFGKRFFTAFNAGFNVMTAKYTRSLQFLVR
RKWWALAGLALVTVATVWMVRKTPTGFIPTEDQGFIVYSVSMPAGSSLERTKKVVSKVEG
IMKRFEAVNHYLSVSGLNILTNSISSSYAVGFVKMKPYEDRGQVKNIQEVMGAMQAQLAS
IKEANIFLFNMPTVPGFSNMDGFEVILQDRTGGSLDKLSNVAYGFIGELMKRKEIAFAFT
TFNNGNPQFNIEIDELRAKQLGVPISEILQTLQVYYGSSFASDFNRFGKYYRVIVQADAN
TRAEPSSLNGIFVKNMGGEMVPMNEVVELKKVYGPETVTRNNLFTSVSINGQPKPGYSSG
DAIKAVEEVAAQYLPRGYSYEWVGMTKEEISAGGQAAIIFLLCLIFVYFLLAAQYESYIL
PLSVILSIPLGIFGVFLFIRLFGIDNNIYVQVGLIMLIGLLAKNAILIVEYAVQRRRAGM
GLLAASLQAAKLRLRPILMTSFAFIVGLIPLMRASGSSALGNKSISTGAAGGMLTGVFLG
IFVIPVLFIIFQYLQEKVSGKPKPTPIETTESKW
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgctaagaaaatttatagaacgacctgtattggctacagtagtctctattatactggtt
ttactgggaggcttgtcactggtatcattacccgtgacgcaattcccagatattgcacca
cctagcgtgcaagtgcaagcctcgtacccgggggccaatgcggaagtggttgcccgttcc
gtggcaacaccgatcgaagaagccgttaatggtgtggagaacatgacttacatgacatct
acctccaataacgatgggtctatgatcttgacagtttattttaagctgggtacagatccc
gacatggcagctgtgaatgttcaaaaccgcgtatcaaaagcaacgagcttattacccacg
gaggtggttcaagcaggtatcactacgcaaaagcaacaaaacagtatgatcatggtggtg
aacttgcaaagtgataacaaagcttatgatgaaacgttcttgcaaaactatgctaagatc
aatatcatcccggagatgcaaaggatcaacggcgtggggcaagcgatggtattcggtgcg
aaggattacgcgatgaggatttggttgcgcccggatcgtttggctgcttataacatgtcg
ccgcaagatgtgctgaatgctatccgcgaacaaaacgtggaagcagcgccgggacgtttc
ggggaaaacacgagtgaatccttcgaatatgttatcaagtacaaaggtaagctcaacaag
ggcgagcagtatgaaaacatcatcttgcgcgctaacccggatggatctttgcttaggttg
ggcgatgttgcccgcgtggaattcggttcatttacctacagtaatgatacgaaggtgaat
ggtaaatatggtatcggtatcgcgttatatcaaacagccggttccaatgccaacgacatc
caggtggctgtaaatgaattaatgcaaaaagcctcgaaagcattcccggcagacgtggaa
tacttcaatatttatagtacgaaagaatatttagatgaatcaatagaccaagtgaagcat
acgcttatcgaggcttttatcttggtgttcatcgtggtatttatcttcttgcaagatttt
agatccacgttgatcccggctattgcagtgccggtagctatcatcggtacgttcttcttc
atgcaattgtttggttttaccatcaacttgctaacattattcgcgctcgtgttggccatc
ggtatcgtggtggatgatgcgatcgtggtggtggaggccgtccatgccaagatggaaagg
atcaatatgagtcccaaggacgctacgatcagttccatgcaggaaatttccggggccatt
atctcgatcacgttggtgatgtcggcagtatttatccctgtagggttcatgcaaggtccg
gcaggagtgttttacaggcagtttgcctttacgctcgccatcgcgattttgatttccgcg
gtgaatgcattgacactaagtcccgctttatgtgcgttgttgctgaaaaataaccatgcc
gctggtgaaggggggcatgttgagaagaaaggttttggaaaacggttttttacagctttc
aatgccggttttaacgtgatgaccgcaaaatatacccgcagcttgcaattcttggtaagg
cgcaaatggtgggcattagcaggcttggctttggtaactgtagctaccgtttggatggtg
cgcaaaacgcctacggggtttatccccacggaagaccaaggttttatcgtgtattctgtc
agtatgcctgccggtagttccttggaaagaacgaagaaagttgtgagcaaggtagaaggc
atcatgaaacgattcgaagctgtgaaccactatttaagtgtttccggtttgaatatcctg
actaattcaattagctcatcatatgcagtgggtttcgtgaaaatgaaaccttatgaagat
cgtgggcaggtgaagaatatccaggaagtaatgggagcgatgcaagcacaattagcttcc
attaaagaggcaaacatcttcttatttaatatgcctacggttccagggtttagtaatatg
gacgggtttgaagtgatcctgcaagataggacaggtggaagtcttgataagttatcgaac
gtggcgtatggatttatcggtgaactgatgaagcggaaagagatcgcctttgcctttacc
acatttaataatggtaaccctcaatttaatatagagattgatgaattaagggcaaagcaa
ttgggcgtacctatcagcgagatactgcaaacattgcaggtgtattatggtagttccttt
gctagtgatttcaaccgtttcggcaagtattatcgcgtgatcgtacaagcggatgctaat
acccgtgccgagcctagctcattgaacggcattttcgtgaagaatatgggcggggaaatg
gtaccgatgaacgaggttgtagaattaaagaaagtttatggtccggaaacagtgaccagg
aataacctatttacctccgtgtcgatcaacgggcaaccgaaaccggggtatagttccggt
gatgctatcaaggcagtggaagaagttgcagcgcagtatttaccccgtgggtatagttac
gaatgggtaggtatgaccaaggaagagatcagcgccggtggacaggcggcaatcattttc
ttgctctgtttgatattcgtgtacttcttgctggcagctcaatatgaaagctacatatta
cccttgtccgttatactttcaattccactggggatcttcggagtattcttatttatacgg
ttgtttggtattgataacaatatctatgtacaggtgggtttaattatgttgataggtttg
ttagcgaaaaatgccatcttgatcgtagagtatgcagtacagcgccgccgcgcaggaatg
gggttattggcagcaagcttgcaagcagcgaagttaaggcttcgcccgatcttgatgact
tcctttgccttcatcgtgggattgatcccgttgatgagagcatctggatcctcggcatta
ggaaacaaatctatcagtaccggtgctgccggggggatgttaaccggggtattcttaggg
atatttgtaatacccgtattgtttatcatcttccagtatttacaggagaaggtaagcggg
aaacctaagccgacaccgatcgaaacaacagaatcaaaatggtaa
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